Array 1 156566-159636 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVTA01000004.1 Streptococcus anginosus strain OUP19 oup19.s3-trimmed-pair1_paired_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 156566 36 100.0 30 .................................... CCATACTGTTGAAGGATATCTCCATTAGAG 156632 36 100.0 30 .................................... TTATGGATAATGGTGATATCGGCGTAGAAG 156698 36 100.0 30 .................................... AATGAAATACACTTGATTGTAGAGGGTTAC 156764 36 100.0 30 .................................... AGCTGATTTGAGGGGTACTTGTTGGGCAGT 156830 36 100.0 30 .................................... TTCTATCGGTTCATGGTATCGAGTTGTAGT 156896 36 100.0 30 .................................... CCAGCGAATAAAGATTTTTGCGGATTATTT 156962 36 100.0 30 .................................... AAAAGCCAAATATGATGAACGTCACGCAAT 157028 36 100.0 30 .................................... TTGCTGTTAGCGGTTACCCTGCCTTGCGCT 157094 36 100.0 30 .................................... GTCAGGCATTAGCATATCGCCAAAAGGATA 157160 36 100.0 30 .................................... TTGGGGCACGTAGAGTTTTGTTGCGATTTT 157226 36 100.0 30 .................................... AAGCTATCGGAAAAGAGTGGAACAAGCATT 157292 36 100.0 30 .................................... AATCCGAGAAGAGATTAGTAAGATTTCTGT 157358 36 100.0 30 .................................... AGACATTCTTTATTGTCTCGTTCTATTGCT 157424 36 100.0 29 .................................... GTCACATTGGTCGATATTGGCGATTTGAT 157489 36 100.0 30 .................................... CCTCGCCTATCGCATTCTTGATTGAGTGTT 157555 36 100.0 30 .................................... AAACGCTTATTTTCACAATTATTTTAGAGG 157621 36 100.0 30 .................................... CTCAACTCAACTCTTCTATTCTGTCGTTGC 157687 36 100.0 30 .................................... TGATTTGGAAATCTTAGCAAAAATAGAAAG 157753 36 100.0 30 .................................... CGTTCATTTAGTGTCATTGTCTGCCTCCAA 157819 36 100.0 30 .................................... CTTTTGTGCTTTAAGACACCACTCTGGACA 157885 36 100.0 30 .................................... ATGACATACTACATTTCAGACTGTTATCTG 157951 36 100.0 30 .................................... TGTTACTGGAATGAGACTAGGCGAAAGCCT 158017 36 100.0 30 .................................... AGGTAGTGGAGATAAGTTTACTGTATCTAA 158083 36 100.0 30 .................................... ATGATAAAAAACGTAGTCGATTTAAAGATT 158149 36 100.0 30 .................................... AAGATAAAGAACTAAAAAAAGCTATGAATT 158215 36 100.0 30 .................................... TTACACGAATATCTACAGATGGCGTTTTTA 158281 36 100.0 30 .................................... CGCGCTTTTTTGATATAATCATCTCAAAGG 158347 36 100.0 30 .................................... TATCCAGATGGTACGACTGTAGAATTTAGC 158413 36 100.0 30 .................................... TCCGCGCTGTTCTAAGAATCGAATTTGTTT 158479 36 100.0 30 .................................... TATAATAGTGTTGTGAAATTTATAACTAAA 158545 36 100.0 30 .................................... TGATTTCCAAAGAGCAAATTGCTCACGATT 158611 36 100.0 30 .................................... ATTGTGACACCGAAAGCAAATGCCGTCTAT 158677 36 100.0 30 .................................... AAACGAATTACCACCAATTTCTAGTTTTCT 158743 36 100.0 30 .................................... ATTCCCGTTTCCTAAACCGCTAAATAGTGA 158809 36 100.0 30 .................................... TAAACTGCTGTGATATTCAGTATCTTCGTT 158875 36 100.0 30 .................................... TAGTTAGAAAAGGTTAACGTGTTATTGTTT 158941 36 100.0 30 .................................... CTATTATCAATTTCCGAGAGCAGATAGCCT 159007 36 100.0 30 .................................... TCACGAAACAACCTGCAGACAAAATAGAAA 159073 36 100.0 30 .................................... AGCACGACCGCATGGAACGACAACGGAAAT 159139 36 100.0 30 .................................... TAACAGCTGCAACCATCAAAGAAGATAAGC 159205 36 100.0 30 .................................... ATCTTATTTGCTAGATTCCATTTACTACCT 159271 36 100.0 30 .................................... CACAAGGTAGCTTAAAACGTAGGCATTGGT 159337 36 100.0 30 .................................... ATGAAATGTATTATGAATTTTATTGAGCAT 159403 36 100.0 30 .................................... GACTGCGATTGAGATGCTTGTTCTAGCTGT 159469 36 100.0 30 .................................... ACAAGCGATTGAATCGATTCTCTTAATTTA 159535 36 100.0 30 .................................... TGCCGGCCAACTTTACAAATACAGTTAATG 159601 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 47 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCCGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATATGTCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGGTATAATATTAACAAATATAAGGAATCGTTCGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //