Array 1 206059-208708 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDHY01000003.1 Klebsiella pneumoniae strain SCsl13 NODE_3_length_388672_cov_97.9905, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 206059 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 206120 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 206181 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 206242 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 206304 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 206365 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 206426 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 206487 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 206548 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 206609 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 206670 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 206731 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 206792 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 206853 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 206914 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 206975 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 207036 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 207097 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 207158 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 207219 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 207280 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 207341 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 207402 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 207463 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 207524 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 207585 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 207646 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 207707 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 207768 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 207829 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 207890 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 207951 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 208012 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 208073 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 208134 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 208195 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 208256 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 208317 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 208378 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 208439 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 208500 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 208561 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 208622 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 208680 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //