Array 1 1916606-1914958 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047241.1 Aquitalea denitrificans strain 5YN1-3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1916605 28 100.0 32 ............................ TGTCCGGCCGTTCGGTTTACCTACCCGTGCAG 1916545 28 100.0 32 ............................ AACGACAGAAGCCCGACGCTTACTTGCAACCA 1916485 28 100.0 32 ............................ AGCCTGACCCGCGAGCAGAAGACGCGCAACAA 1916425 28 100.0 32 ............................ ATGCAGCAAGGTCTGGTATCCACGCTGGACAG 1916365 28 100.0 32 ............................ ATGCTGGACAGTGCCGAGTGTCTGCAAATGTT 1916305 28 100.0 32 ............................ AACGACAGAAGCCCGACGCTTACTTGCAACCA 1916245 28 100.0 32 ............................ TTAGCCACGGATTCGTCGGCCTTGCTCGGCGC 1916185 28 100.0 32 ............................ TGAATCATGCCGGCGTCTGCTGGGCCGCTGGG 1916125 28 100.0 32 ............................ TGCCAAGAACAGCAGATCAGACGTGAAACCAT 1916065 28 100.0 32 ............................ ATCGCGAAGAACGCCCGCATTGCCCAGCGCTC 1916005 28 100.0 32 ............................ AGCTATATCGCAAACACGATCGCGCAAGTAAC 1915945 28 100.0 32 ............................ ATCCTCAAAACGTCCAGCTTCACGCAGTAACT 1915885 28 100.0 32 ............................ GTTGCAATGCCCTGTGCCAAAGCGCTTGCCGG 1915825 28 100.0 32 ............................ AAGCTGGAGGAAATCTTCGGCTTTGGCGTTTC 1915765 28 100.0 32 ............................ GTCCGAAGGCGGCAATGCTTACCCTGACTTAT 1915705 28 100.0 32 ............................ ATCATGACCCTTTTGGGGTTATGCTGACCCCA 1915645 28 100.0 32 ............................ GCTTCAGAATAGCTGGAAAAACGGTGACGTTG 1915585 28 100.0 32 ............................ AACTACAGCACTGAGGACATTTTCCTGCACGC 1915525 28 100.0 32 ............................ ATATTGAAGGCGATGAAACCGGCGCACTGAAT 1915465 28 100.0 32 ............................ TTGAGCCAATGAAGAGTAAATAGCGTTTTTCC 1915405 28 100.0 32 ............................ TTGCTGCCGAACGTGCCGAGCAAGAACGCCTT 1915345 28 100.0 32 ............................ AGTACCAGTCAGCGTCGAATTCTTCTTTCAGG 1915285 28 100.0 32 ............................ GCGCTACGATGACTTGGCTGTACCGAAGACAT 1915225 28 100.0 32 ............................ TACCGGGAAACTTACACCTGGGCAAATGGCGT 1915165 28 100.0 32 ............................ CAGCCGCACCAGCTATCAGTTGCTGCCGTCCC 1915105 28 92.9 32 ...........C.T.............. TCCAAAACTAAGCCGCCTTGTGGGCGACTGTG 1915045 28 92.9 32 AC.......................... GCCCCGCCCGCGCAGGTGCCGGAAGGTATCGA 1914985 27 85.7 0 ..C..........T..C......-.... | A [1914965] ========== ====== ====== ====== ============================ ================================ ================== 28 28 99.0 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : CTGGGCCAGCGGCTTTGCCGATTACGCGCTGATTGGCAACATCCGCCCGGTACCCGCCACCACCCAGGCTATTCGCGTACAGCGGCGGCAAGCCAAAAGCAACCCTGCCCGCGAACGCGCCCGACTGATGCGCCGCAAAAACATGGATACCGCCGAAGCATACCGCCGTATCCCTGACCGCAAGGCACGGCGCCTGTCCCTGCCCTACATCACCCTGGACAGCAGCAGTACCGGCCAACGCTTCTTGCTGTTTATCGACCAGCATGCAGTCACTCAAGCAGTCAGCGGTGAGTTCAACAGCTACGGCCTGAGCAGCAGCGCCACCCTGCCCAGTTGGTGACACGAGGGGTTGCTACCGGAGAACGGCAGCAACCCTTTTTTTTGCGTGGCTCCGTGATCTTTAAAAATCAATCAGTTACAACGCAGCAGCAAAGAAAGGTTTTCGAAGCCAGAATGGCCCACAGCCGGACTGGCCAAGCAAACCAGCGTAAAGCGGCCTG # Right flank : GGCTGACTCGTCTACTCTGCGGTCCATTCGGTCAGTTTCCGCACTCCCCTGCCATCCCTAGAATCCGCCGCTGGTGCTCAACACACCTTCTCGAAGCGGTTGCCATGCCCGAAAGCAGATGGCGTTTTCATGCTCAAAGGAACCCGCTCGATGACAGCTCAAACCACCCCCCAACATCCCCCGCCCCTTTGCTTTTACTACTACGGTAAGCCCCTGCATGTGCAACACCACCATGGCCAATGGTGGCTGTACAGCGGCGATGTGCTGGCCGTCATTGGCCGTCGGCTGGGAAGCCGTATCCAGCAATTACTGGCCGCAGACCCGACCCGCGAAAACACCGCAGAAACTGAAGACATAAAAGAATACTGGCCCGCAACGGCGCTGCTGCGCGCCTTGCATCGCAGTGGCAAGCCGCTGGCGCGGCAGTTACGTGACTGGTTGAACCGAGAGCTGCTACCGGCACTGGAACAGCTTCCGCCCACAGCCCCGCGTTGGGAACA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //