Array 1 3088-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGO01000225.1 Acinetobacter ursingii strain TUM15084 sequence225, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3087 28 100.0 32 ............................ ATTGTCTCAGCAGAGCTATAACGATCAGGTGA 3027 28 100.0 32 ............................ GTGATTGGCTACGTCACCTGCAATTCCGTCTA 2967 28 100.0 32 ............................ GAGTAATGCAATCTGGTTCAAAGCACAGCCTG 2907 28 100.0 32 ............................ TTGTTTGCCTGCTTCTAGTACCGTAATAACAC 2847 28 100.0 32 ............................ TACAAAGAATATACAGCAAACGGTGTAACCAC 2787 28 100.0 32 ............................ AAAGCATTGGCGGGTGGTGCTGCTGCAATTGC 2727 28 100.0 32 ............................ TAATAAACCCTTTGATCAGCAACAGATTCAAG 2667 28 100.0 32 ............................ AGAACAAGTCGATGCTGCTGTAGGCGATGCTA 2607 28 100.0 32 ............................ CGACTAAGCCCGCGCGTAGGAGTAAAAATGTT 2547 28 100.0 32 ............................ AAGATCGAAACAATGATTGTTCCCGCAGAGCC 2487 28 100.0 32 ............................ CAAGACCAATGAAAAGTAAATATGCAGGCCAG 2427 28 100.0 32 ............................ GTATTACTGTTTTGATTAGATAGTCCATTTTG 2367 28 100.0 33 ............................ CTGACCAAAAACCAACAGTCAATCAAACTGCCA 2306 28 100.0 32 ............................ AATTGGATAAATATCCATTTGGGGAATCTAAT 2246 28 100.0 32 ............................ ACCTAACGACCAACCACCAAGACCCGCTGCAT 2186 28 100.0 32 ............................ TTTACGTAACTCAGACGTTGATGACGGATTGC 2126 28 100.0 32 ............................ AAGCTGCCTTTGAACAAGTAGCCAAAATCGTA 2066 28 100.0 32 ............................ GCTTGAAGTCGTGGTCAAGCAAAAGCGATTCT 2006 28 100.0 32 ............................ GTAGACCTGCTGCCAATGAATGCGCGGTAATT 1946 28 100.0 32 ............................ TACTGCTGAACCGTCTGAAGATGAAAAGAAAT 1886 28 100.0 32 ............................ CACAGATCAAACAGCTACTGGGGAAACAGTTC 1826 28 100.0 32 ............................ TGAACGACTGACCACTCCATACGCATTGATTG 1766 28 100.0 33 ............................ CATGAAAAGAACATTTATTGTATTTCTAACATT 1705 28 100.0 32 ............................ TGTGGCTTTTCAAAAGTATTTCTCCAGAACCT 1645 28 100.0 32 ............................ GTAAAGCCTATGGCAAATCATGCGAATTTCAG 1585 28 100.0 32 ............................ TGCTGAGAGTTCGTATAATTACTTGATTATGT 1525 28 100.0 32 ............................ GTAGAAAACAGATTGGCTTTGGAGTTTTCACC 1465 28 100.0 32 ............................ GCTTGATATGGATCAGCTCGATTTATTGGAAG 1405 28 100.0 32 ............................ TTGCTGTAGAGCACCACCAATGCATTCTGGTA 1345 28 100.0 32 ............................ TGTTGAGTTCATTTCCAAGCCATCGACTTGTA 1285 28 100.0 32 ............................ CTCAGAAAAACACCTATCTGCAACACAATGGA 1225 28 100.0 32 ............................ AAGCAATGAAGCTATTTAGTGAGTTTGGAGAA 1165 28 100.0 32 ............................ TTTTTGAGCTTGAATAAAGGCTTTCCAAATTG 1105 28 100.0 31 ............................ TTAGTATTAATTGCGTCGTAGTTGGCGCTCC 1046 28 96.4 32 ...........................A AGTAAAAGCCCTCGATTGAGGGCCATGTTATT 986 28 96.4 32 ...........................A CTGACACTTATTAAAATGCAGCATGTAGATTG 926 28 96.4 32 ...........................A GAGCTATCAAGCTGATAACTATGTACAGCCGA 866 28 96.4 32 ...........................A ATCCCCAGAACCTGATCCATTGCCTGAACCGT 806 28 96.4 32 ...........................A TGTAGGCGGGCGTTCGCAATACGTGCCTGTGC 746 28 96.4 32 ...........................A ATTGGGATTGAGACTTTAGGCGATAAATTTTG 686 28 96.4 32 ...........................A TGAAGAAAACTAAGTTATTGATTTTTGGTAAA 626 28 96.4 32 ...........................A CATAGCGTTTTTGAGTGCATAGATCGTAATAA 566 28 96.4 32 ...........................A TGTAAGTGTAGAACTAACTGAACCTATACCTT 506 28 96.4 32 ...........................A TTTATTAATATCATTTAAAAAATCAGCTAAAC 446 28 96.4 32 ...........................A TTATCTACGTTCAGATTGTGAAAAATGGGTAA 386 28 96.4 32 ...........................A TCTAAGAAGAAGCCAATAACTAACAATAGGAT 326 28 96.4 32 ...........................A CAAAATAAGCGATTGAAGTTCAGTTGCATCGA 266 28 96.4 32 ...........................A TGATGTTAATGTCCCAGTCAATTTAATGGGCC 206 28 96.4 33 ...........................A ATGATTATGTTACTTGCCGTTTTCGTTGACTAA 145 28 96.4 32 ...........................A AGTAAACTGTAGAACCGTAAACCAATTTAGAT 85 28 96.4 32 ...........................A GAAATTCAAACAATCAATGCAGATCTTAAAAC 25 25 89.3 0 .........................--- | ========== ====== ====== ====== ============================ ================================= ================== 52 28 98.6 32 GTTCATGGCGACATACGCCATTTAGAAT # Left flank : TAGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATGTCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTACTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAGAACGCCGTGGAATTTCAATTGAAGAAGCACAGGAACAATTTAAAGCATTGGATCTGACGGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAACTTCCGTTTGATTATTGGGAAAAAATGTATTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCCACAGTACCCGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGCTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : G # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4595-3909 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGO01000224.1 Acinetobacter ursingii strain TUM15084 sequence224, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 4594 26 100.0 34 .......................... TCAGGCATTGCACGTTCTACCCATAGTTGAGGGT 4534 26 100.0 34 .......................... TATAGCGCGAGTGAGTTTGAAATTGTTCCACAGT 4474 26 100.0 34 .......................... CAAGACAGTTTTCGCTTCTGGGGTTCGCGTACGT 4414 26 100.0 34 .......................... AACAGGAAAGGGGCGTACTTTAGTTATTGGTAGT 4354 26 100.0 34 .......................... GTATCGACTTATGCAGTTGAAAATCCTAATTCGT 4294 26 96.2 34 ....................G..... GTAGTAATATACAACCAAACCAATTTTGGATTGT 4234 26 100.0 34 .......................... AAAACGTGCCGTCGCTTTCAATGTGTGTCGTGGT 4174 26 100.0 34 .......................... TGTTAAAAATATCTATAGAATAATTCGATCAAGT 4114 26 100.0 34 .......................... AGCAGGAATTTCTTTTTTAAACGACTTAAATAGT 4054 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 3994 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 3934 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 12 26 97.4 34 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : GCTTATGATTTAACTTATTTTTAAAGCATAATATCAAATTATTAAAATAACTTGTTGTTATTAAATGATTTATTAATAAGAGTTTATAG # Right flank : CGAGAATCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGTCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGGGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGTACTGG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 18-1185 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGO01000055.1 Acinetobacter ursingii strain TUM15084 sequence055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 ............................ TTACCGCTGGGTTCCCAAAAATCAATCACTAC 78 28 100.0 32 ............................ GAGTGGTATCAGCCACCAGTATCGCAATTTAA 138 28 100.0 32 ............................ ATTGTGCATAAGTCCGCAAAACGAATTGATGT 198 28 100.0 32 ............................ AACACGGAAATCCCAAGTTACGCCCGAGAAGT 258 28 100.0 32 ............................ AAATTGCGATGAGAGAACATTGAAGTTTTGGG 318 28 100.0 32 ............................ TTGTTCCGAATTGGTTTTTGATGTCGTGTGTT 378 28 100.0 32 ............................ GAAAAGGCGAATAACCAATTGACAAACCTTGA 438 28 100.0 32 ............................ AATCGTACATTGCACTGATTGTGATGTATCGG 498 28 100.0 32 ............................ ACGACAAGAACCGTAAGTACCCTGATCAACAT 558 28 100.0 32 ............................ AACATAACAATAGTCATGAGCCTGTATTAATC 618 28 100.0 32 ............................ CGCTTGCGAATGATGTGTACAATCAGGGCTTG 678 28 100.0 32 ............................ AAGAGTTGATAGTAAAAAGAAAACTTAACAAT 738 28 100.0 32 ............................ TAAAACTTGCATGTAATATCCAGTAAATTTCC 798 28 100.0 32 ............................ ATTTTGAAAATGTGAATGCATCTGAGATTGAA 858 28 100.0 32 ............................ TCAATAGTTTGTCCAAATAAGAAGAATTGCGT 918 28 100.0 32 ............................ TCTTCAGAGTTGATACCAAATACGGCAGATTT 978 28 96.4 32 ..........G................. AATCAAAATTAAATGAGAAATAACAGATTGCT 1038 28 96.4 32 ..........G................. TAAAGATTTTGGTATCTGGAAATGGTTGCGAG 1098 28 96.4 32 ..........G................. AATTGGTGAAAATGAAGTTTCTGAGGGAATCA 1158 28 92.9 0 ..........GT................ | ========== ====== ====== ====== ============================ ================================ ================== 20 28 99.1 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : AATGAAGATATTAAAAAG # Right flank : ATGTAAACGACGTGTAAGAGCTTAAGCTGATTGATTTACGAGAGTAGAATATGGAATCTAAACGATCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTGTTTTATCAGCTTCTAATACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAATGCCATTGATTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //