Array 1 376483-377170 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNYO01000024.1 Legionella nautarum strain ATCC 49506 Lnau_ctg024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 376483 28 100.0 32 ............................ CAACAATGCCATCACGCCCTATTTTTTCCCAA 376543 28 100.0 32 ............................ TCGAACTGCTGCTAATTTGTCTAATGACTTAT 376603 28 100.0 32 ............................ TATAGGACGTGGAGCTTTAGTGCCTACTTTTG 376663 28 100.0 32 ............................ TCGTGCTAAACGTCTTGCTAATATGGTTGAGG 376723 28 100.0 32 ............................ AGCATGGGTTTATTAGGGTCAAATACGGCTTT 376783 28 100.0 32 ............................ TTATCTTGAAATGGCAAACGCACCTCGTGCTA 376843 28 100.0 32 ............................ TGACGTTTGATCGTGCTCGCGATGAACCTTAT 376903 28 100.0 32 ............................ AAGACGCGGCATTAAACTTTTCATAATTACCC 376963 28 100.0 32 ............................ GTCCGCATCTGCCCACATAAAGGGATTGTTGC 377023 28 100.0 32 ............................ CGACAAAGGCATGCAAAATGTGACAATCAATC 377083 28 100.0 32 ............................ ACTGGAGTACTTTAAAATCAAATTATACCCAC 377143 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTAACTGCCGTATAGGCAGCTTAGAAA # Left flank : TGCTCGAGAAATTTAATGCAATAAAATGGTTAAATAATTTCTCTGATTATGCTCACATAACTGGAGCTCGTGATGTCCCGGGTAATATAACCAGTTATGTTCGTTTCAAACGAAAGCAATCGAAGTCTAATACTGAACGCATAGCTCGAAGAAAGGCAAAGCGGGAAGGGATTGATTTGGAGAGTGCGATGGGATTATTAAAAAATCATAAAGAATCATTAATACGCGCGCCATTTATAAAAATTTCGAGCCTAAGCTCCAAAAACACATTTAAGCTCTTTATTTATAAAGAACCCTCTGAGGAACTTATAAATAATGCATTCAGTTGTTATGGTTTAAGTTCTGTATCAACGTTACCTGACTTTTAACCTTTATTTTTGCTGTTCTTTAAAAATTTATTTAAATCAATAGGTTGCGAGCATATAAAATATCAATGGTTACACATCGATATTTTATACTAGCTTATTGTTTATTAAATTGATTTTAAGTGTGAAATTTGG # Right flank : AATCTGTTAAAATCCAGTCAATTTGCAAATATTGTTAACTGCCGTGGTCTAATAGATTTTGACACCCCAGTTAAGAGATAATGTACTTAACTGTAGAAAAAAATGGTGGCAAGAAAGAAGTATTCTAAAGAATTCAAACTTGATGCAGTTAGTCTGGTATTAGAACAAGGCTATGGCTGCACAGAAGCGGCTAAAAGTTTGGGGATTCATCAAGCTCTACTTAGTCGCTGGCTTAAAGAGCACCAAGAGCCTGATGGGCAAGCATTTCGAGGAAATGGCAAGTTAACAGCAGAACAATTAGAGATACGTCGCCTGCTGGAAGAAAATAAACGCCTGAAAATGGAAAAGGAAATCTTAAAAAGGGCGGCGGTCTTCTTTGCTCAAGAAACGAAATAAAATATTCGTTTGTCGCCCAAAATAAGAAGACCTGGCCAGTTGGCTTAATGTGCCAACTCCTGGGCATTACACGGCATGGATATTACAGTTATCAGCAACGTCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTAACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //