Array 1 2291410-2290840 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013843.1 Clostridium botulinum strain B742 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================== ================== 2291409 30 100.0 37 .............................. ACGTAAAGGAAGTAGAGGTTAATTATTCAATATCAAA 2291342 30 100.0 35 .............................. TTAATTTTTCCTCTCTAACTCTTTGATTTAAATTC 2291277 30 100.0 36 .............................. TTGCTCCTACACCTTTATATTCTAATTTAATATCTT 2291211 30 100.0 36 .............................. GATAATTTTTTGATTATAAAGTTATCTGGTTTTATT 2291145 30 100.0 36 .............................. TCAATTCTAAATTATATATATTAAAAAAGCATAAAG 2291079 30 100.0 35 .............................. GATATTCTACTTGATAGTCTATTTATTATTTTAGA 2291014 30 93.3 115 ............................GC AGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCATTCGAGGTGAGGAGAATGAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAGTATGCTTTTAAACT 2290869 30 83.3 0 T......A.......GA...........T. | ========== ====== ====== ====== ============================== =================================================================================================================== ================== 8 30 97.1 47 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAATTAATAATTTCTGATTTTTTAGATGAATTAATAGAAGTTGAACAGTAACATAAGATGTATTTAAATACTGTTATATCTTGTAAATCTTGTTCATTTTTTAAAGTTGAACAGTAACATAAGATGTATTTAAATTCTATAATAATGATTGTACCCAAAATAATAGCAATTAGTTGAACAGTAACATGAGATGTATTTAAGCAGAGAACTTAAATTTGCGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGAAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATG # Right flank : TATAAGTACTATTAGGTCAATTAGATATCTGATTATTTTTCATGATGAATTACTTGATATAAATAAATTTCTATAATGCACCACAAAACCTATAATAATATGGTAAAATAAAGATATATTTCAAATAACAAATGCATTTTGTTGCGCATGAATAATACTTACATAAAAAGGGTAATTAATAATAGTTATGTTATTATAAGATATATGGAGGTTTTGGTATGAATATATTAATATCCATTTGCAATATAGGTATTCCTGTACTAATGATTTTTATAGGAATTTTATATAAATGTAATTTATATAAAAAGATAGACAGAACATTAGATTTAATTGTACCTATAGCAACGTTTTTTACTGGTTTTTCAGAGAGAGATAGAGAACATTTGTATAAGAATACAAATAACTTGGCTTCGGTTAATAGAAAATGTAGTTTAATATGGAGTATTTCAGGAGTATGTACACTACTGCTTACTATAATATCGCTAATATTAAATAAATCT # Questionable array : NO Score: 4.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-1.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2291891-2291663 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013843.1 Clostridium botulinum strain B742 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2291890 30 100.0 35 .............................. TAATAATTTCTGATTTTTTAGATGAATTAATAGAA 2291825 30 100.0 36 .............................. ACTGTTATATCTTGTAAATCTTGTTCATTTTTTAAA 2291759 30 100.0 37 .............................. TCTATAATAATGATTGTACCCAAAATAATAGCAATTA 2291692 30 90.0 0 ...............G............GC | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : TCTTTACCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTGTTTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTCAATTTAGAATATTACATTTATTTTTCCAACTAATTTTAACTTATAAACCTATCTTAGCTCTTGAAATATAAGGCTTAAGGTAGGTTTTTCTTATATATTCATAAAATATAATAATCGGTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAATAGTTATATGCTATTCTTAAAATTAAGAAATGGCTATTTTACTATG # Right flank : AGAGAACTTAAATTTGCGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGAAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATACGTAAAGGAAGTAGAGGTTAATTATTCAATATCAAAGTTGAACCTTAACATAGGATGTATTTAAATTTAATTTTTCCTCTCTAACTCTTTGATTTAAATTCGTTGAACCTTAACATAGGATGTATTTAAATTTGCTCCTACACCTTTATATTCTAATTTAATATCTTGTTGAACCTTAACATAGGATGTATTTAAATGATAATTTTTTGATTATAA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 3 2292744-2292898 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013843.1 Clostridium botulinum strain B742 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =========================================== ================== 2292744 23 100.0 43 ....................... GGTATATTATACACATAGACAACGACACAAACGAGGATTTAAA 2292810 23 100.0 43 ....................... AAAGGAAATAATAGAAAGTCATACTTTATTAGGAGCATTTAAA 2292876 23 95.7 0 ......................C | ========== ====== ====== ====== ======================= =========================================== ================== 3 23 98.6 44 TACATCTCATGTTAATGTTCAAT # Left flank : GGTGGTATTGGATATGCTAGAATTAACCATAAAAAGTTTTGTTGTAATTTATATTGTTAAATTAATTTTAAAACATAATCTTTTTATTTCTAAACTAGTTATCAAGATTAAATTTCTTGGTATTCACATAGAACTTAATGGTAAAGAGAAAAAGCACCCATCCGACCAAGAATAGTGCTTTAATCTCTCAAATTTAATTATTAAATTCATCCAATAGCCCTAAAACAAAATAAATGTTCTAAGGATTGCTTAGTGCTCCAACACTAAGCTTTTCTTATTTATATTATATCAAATTTATATAAAAAATAAACACATATTTATATGTTTAATTTTTTAACTATAAAATTCTATAAAAAAACTAACTATAAAATTAGATTTTACTGCTTATAATTGATTCTCTATAGTTTTCTGTATAATATTTGCTGTTAGTTTTTCAATTTCAAAATGTTGAAAAACCTTGTCAATGAAAAACCACCTTAATTATTATTTGTTTTTTTCAG # Right flank : CCATAGTAAAATGACCATTTCTTAATTTAAAGGATAGCATACAACCATTGATTTTACAAGGTTTGAAAAAAAGTTTTCCAAGTGATTTTGTTTTTTTATAAATACAAAATAAAAACCTATCCTAAGCCTTATATATCAATAGCTAGAATAGGTTTTTAAATTTATTGTGGTTGGAAACTTTAATTTATGAAACTACTTCTCCAATTCTCGAAGTAGTAAGCGACTCACACCAAATCTGGGATTTGGGTTCCCTGCTTAAATACTATATTATTGATATGAAATGAAGCATTCCTCCAGATAATAATGCTACTACAGCGCCTGTTATAGTTCCAATACCAGCTCCTTTTATATGATACCATGGACTTCTATATTCTTTATCCATATCCTCTGTACCAGGTATTCTAGTTTTTTTACTGTGACAAAAAATACATATATCTAAAACAATCATATCATAAATATTTACTACAAAAAACAAAGTAAATACATGAATATAGGCTTTT # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACATCTCATGTTAATGTTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 2300042-2299884 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013843.1 Clostridium botulinum strain B742 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 2300041 28 100.0 38 ............................ ATCTAAATTCATGAGCAAATATAAAAATTCCTAGTCTC 2299975 28 100.0 36 ............................ ATAAAATACTATTAAATCTTTATCAGTAACTTTAAC 2299911 28 96.4 0 ............A............... | ========== ====== ====== ====== ============================ ====================================== ================== 3 28 98.8 38 GTTGAACATTAACATGAGATGTATTTAA # Left flank : GAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAGTATGCTTTTAAATCTTTGAACCTTAACATGAGATGTATTTAAATATTTGATAGTTAACCTGTTGCTTATATGAAGAAACAAGCTGAACCTTAACATAGGATGTATTTAAATTTTTTATATATAGCTGTATTTAATTCTTGTACTGCCGTTGAACATTAACATAAGATGTATTTAATCAGAGAACCTAACTTTACGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGTCTCATTAATGAGCATAGTATATATATCATATCTAATTAAATTTTTCCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGAAAATTTTCTTTTAAACCTTGTAAAATCAATGTGTATATGCTATTCTTAAAAATAAGGAATGGTTATTTTACTATG # Right flank : GCAGGGAACCCAAATTTACAATTTGGTGTGAGTCGCTTACTCTTTAGAGGTAACCAAAAGGAGTTTCATAAATTTAATTTTTCTAGGCGTAACAAATTCAGAGCCTATTCTAGCCATTGATATATAAGGCCTTGGATAGGATTTTATTTTGTATTTACAAAAAAGCAAAATCACTTGGGAAACTTTCTACAAAACCTTGTAAAATCAATGCTTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACAATAACATGAGATGTATTTAAATTCAAAATCTTGGTCATCAGTTGACATATTTTCTTCTGTTGAACAGTAACATAAGATGTATTTAAATTTAAAACTCATTCCTGCTGCAAAAAGAACGTTACTAGTTGAACAATAACATGAGATGTATTTGAGCATAGAACCCAGCTCTGTAATTTAGCGTGAAGCTCGTACTTCTTGGAGCAAGAGAGTAGATTTTTATTGACTAAAATATTTTTGA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 5 2301685-2300322 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013843.1 Clostridium botulinum strain B742 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================== ================== 2301684 30 100.0 36 .............................. CTATAGAGTTGAATATCCATGCTCCTACAAGTATTA 2301618 30 96.7 36 .................C............ TTGTTTTGCTATCAAATTTTTCAGCTTTGAAAGTTA 2301552 30 100.0 37 .............................. GTGTTAATTTTTAATTTATACATTTTTAATTCCTCCC 2301485 30 100.0 36 .............................. CTATTTGCTTTTGTTTTATTACTAGTAGAAGTATTT 2301419 30 100.0 36 .............................. TTGATTGATAAAATGGATGCACAACATAATTAGTTA 2301353 30 100.0 35 .............................. TCGCAATATATTTTATCAAATTCCTTTTTTAATTG 2301288 30 100.0 36 .............................. GGCAATGAGAAAAGGTCAGTTAAGTGTCTTAAATCC 2301222 30 100.0 37 .............................. ATGAACGTGGTGGAGAAATGCAAATATTAAGAAATGG 2301155 30 100.0 36 .............................. GTCTGTTTCATTTTTCCACTTATCATAGCAACTTTT 2301089 30 100.0 35 .............................. AGTATTATATCAAATAGTGGGCTCAACATCCTTCC 2301024 30 100.0 36 .............................. ATTTTATAATTAAATTTATCTATTAATTCGCTTTGA 2300958 30 100.0 36 .............................. TATATTTCTTTACCTTTGCTGTTTTTCTTTGCTGCT 2300892 30 100.0 36 .............................. ACGTTTATGGCACTTCAAATCCCTTTTTCGATAAGG 2300826 30 100.0 34 .............................. GTAACTGCCCATGGATAAACTGTTATTTCCTCAC 2300762 30 96.7 37 ....................A......... TACCATTACTTATATTTAAAGCTTTAGCTGCCTTTTT 2300695 30 83.3 36 ......GCT......GA............. TCTGCTTTTTTACCTTGCCCTGGAACATAACCTTAT 2300629 30 76.7 115 ......GCT......GA...........GC AGAGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTCATTCGAGGTGAGGAGAATGAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAGTATGCTTTTAAATC 2300484 30 83.3 37 T......CT......GA............. ATTTGATAGTTAACCTGTTGCTTATATGAAGAAACAA 2300417 30 90.0 36 .C.....CT..................... TTTTTATATATAGCTGTATTTAATTCTTGTACTGCC 2300351 30 86.7 0 ........T.......A...........TC | ========== ====== ====== ====== ============================== =================================================================================================================== ================== 20 30 95.7 40 GTTGAACAATAACATAGGATGTATTTAAAT # Left flank : TGAAGGATTTGTTTTAAATACAAATAGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATCGGATATTCATCTGAAAAAGACTTATATAGTGAAGTTAGATTTGATATCCCAAATGCAAGGCTGATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATAAACTTTTGCGAAAAACTAGAATGGATTTATATCCATATCTAGTTTTTGCTCTTTACTAAAATTTTATAAGTATAGTGATGTTTGTTATGTACTACTTGTGTATATTTAAAATTTTCCAAGTGAATTCAAATTCAAAGCCTATTCTAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGTATTTTTTTAAAAAGCAAAATCACTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAATGGGTATATGCTATTATTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACCTAACTTTACGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGTCTCATTAATGAGCATAGTATATATATCATATCTAATTAAATTTTTCCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGAAAATTTTCTTTTAAACCTTGTAAAATCAATGTGTATATGCTATTCTTAAAAATAAGGAATGGTTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATCTAAATTCATGAGCAAATATAAAAATTCCTAGTCTCGTTGAACATTAACATGAGATGTATTTAAATAAAATACTATTAAATCTTTATCAGTAACTTTAACGTTGAACATTAAAATGAGATGTATTTAAGCAGGGAACCCAAATTTACAATTTGGTGTGAGTCGCTTACTCTTTAGAGGTAACCAAAAGGA # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.36, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [25-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 6 2315055-2314827 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013843.1 Clostridium botulinum strain B742 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2315054 30 100.0 36 .............................. TAAAGCTTATATTTTGGGTGGAACAGATATAATTAG 2314988 30 100.0 36 .............................. GTTTTAGCCGCAAATAAATCTACTGATTTAACACAA 2314922 30 96.7 36 ...............G.............. TCTTCTGTAAAATAAAGTTCTGGATTCAAATCTTTT 2314856 30 96.7 0 ...............G.............. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 98.3 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : CTATGTAGAATATGGATCACTATTGATTATAGTTGGTATTGTCGGCATGTCAGGAATGATGTATTGCATTACAAAATTATTAAATGTTTAAAACCATAAATTATAATTTTTTTATTCAACATAACAACTTAAAAAACGAATAATTTATCTAAACACCGCATTGCTCATGAATTGAATTTTAGGATGTTTTTACGTCGCAATTCAAAAATATTGCAAAGTTAGATGTATTTAAGTTGTAAATATAAATCTGAGATTTAGTGTGAGGTGCTTACTCATTTGAGGAAGCGAGAAGGCGTTCTACTAACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTTGAGCGTTGACATATAAGGCTTATGGTAGGTTTTTATTTTATATTTGTAAAAAAGCAAAACTACTTGGAAAACTTTCTTTAAAAACTTTCTTTAAAATCTTGTAAAATCAATGCTTATATGCTATTCTTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : GTATTTAATACATTTTCTAAAGTATTAGCCATATGTTGAATAATAAGAATCATTAAAAGTCTTAGAATAATCTAAGGCTTTTATTTTATGCGAAGTTTTAGAATGGAATATGATGAGTAATTAACTTATTATTAATAAAAATAATAATATTTTTAAAATATAAGTAGAATAATCAGTTATATTAACTAAAGGGTGTATGGTATAATATAGATAAATTTGTATAAAGAGGTGTATAAATGGAATTTTGGGAACTGATTGTAACAGCGATGTTGAAAAAAGACATATATTTTGAAGATTGTGGGTATATAATAGGGAAAAATATAAATAAAAGTATGCTTTGGGATAAGGACTTAAAGGAAGTACATCCAAAGAAACAGTATAAAAATTATGTGTTTAATAGTTTTTATCCTATAGAAAGAGATAAATTTTATAAAAAGGATAGATTGTATATTTTTAATATTAGAGGTTTAAGTAAAGAATTTATAGATAAAATAGAAACT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //