Array 1 147545-146711 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAHOZ010000003.1 Streptococcus pyogenes strain Bra024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 147544 32 100.0 35 ................................ AATAATGCCTATCCACTATATTTTACAAAGAAATC 147477 32 100.0 35 ................................ AGATTCGGCTAGATATTCCAAAAAATCGATAAAGC 147410 32 100.0 34 ................................ TATATAGTCAGCCACATACTGCGGTACTTCTGGT 147344 32 100.0 35 ................................ GCTTTTAGACGTTTTACCGCTGACTGATTGCGATT 147277 32 100.0 34 ................................ TAAATCACTAGTAATTGTATATTGTAATTTCACG 147211 32 100.0 36 ................................ TGCGTTTGTTGTTGGATCCTGCGAAAAAGATATCCC 147143 32 100.0 37 ................................ ACCAACTTGCTTTCCAATTTATCAATTTGGAGATAAG 147074 32 96.9 35 ..............A................. ATGTTATTTCTCCTCGATCTCGTCCAAAAGTCTTA 147007 32 100.0 34 ................................ GGAAGGAAATAGTTGTAAAAATGCCAAAAAAACT 146941 32 100.0 34 ................................ TTTGGTTTAAGCTTAAGATTCACTACTCAATAGA 146875 32 100.0 35 ................................ GAATAACTCTCCATCTTCATCAAGTGACGGTTCGT 146808 32 100.0 34 ................................ ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA 146742 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.5 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCGATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : ATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGATAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //