Array 1 283449-278089 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOEO01000001.1 Epilithonimonas xixisoli strain CGMCC 1.12802 Ga0171576_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 283448 47 100.0 30 ............................................... TAAGGAACCGAAGTCTTGATTAATTTTACT 283371 47 100.0 30 ............................................... CTTTTCGAGACCATTCGCAAATATTCGTTT 283294 47 100.0 30 ............................................... CAAAATATAAGAATGAAAGCGAACGATTTA 283217 47 100.0 30 ............................................... TGGAGCCTGCGAAGAAACTATAAAAACTGA 283140 47 100.0 30 ............................................... ACCAATGCCTCATTTGCCCAAACAACAACA 283063 47 100.0 30 ............................................... GATGCCAGAATCTTTACAGCTGTATCACTC 282986 47 100.0 30 ............................................... TTTGCTTTAGAATCATCACCCATCAAAGGA 282909 47 100.0 30 ............................................... AGTTTTTTTGCTAAGCCTTGCTTTGCGTTT 282832 47 100.0 30 ............................................... GTTACTGGTCCATTTGGTGCTACCAATCCG 282755 47 100.0 30 ............................................... CTATCAATCAATAATCCTTTAACAACATCA 282678 47 100.0 30 ............................................... ACCAGCTGAAAACGGGATAATTCTTAGCAA 282601 47 100.0 30 ............................................... GCACCTTCTGCGGTTGCTTTTGCTAATGCT 282524 47 100.0 30 ............................................... TTTTGGTCCGCAAAAGTTTTTAGATCATTA 282447 47 100.0 30 ............................................... CGGTAACTCGTATCGGTGTAAGCTCTGGAT 282370 47 100.0 30 ............................................... ACGCCTTTCATTGAAACGGCTGTGCGTGTG 282293 47 100.0 30 ............................................... GTCGGAAGAGTGTGGTCGGGCAAAGGTGCT 282216 47 100.0 30 ............................................... CGATTGCGGCGATTGCGGCGATGTTCGGGT 282139 47 100.0 30 ............................................... TCGCCGCGGTTTGTGCAACATTGGCGACCG 282062 47 100.0 30 ............................................... TTAATTGTTGAAGCAACTGCAAAAAAATAT 281985 47 100.0 30 ............................................... GTTGGTAATATTTGCATTGACTGAACTAAT 281908 47 100.0 30 ............................................... AAAGAAATAAAGCTGGAAGATATTGCTCAA 281831 47 100.0 30 ............................................... ACAACGCAAGGCGTGAACATCACGATTAGT 281754 47 100.0 30 ............................................... AGGCGAAAATATTTCCGTTGACATCAAAAC 281677 47 100.0 30 ............................................... TCCGACTGTGACGAGAAGGAGCGCTTTAAA 281600 47 100.0 30 ............................................... TCATTGATTTTGTTAGTGATACTAATTTTA 281523 47 100.0 30 ............................................... TATCCTACAAAATGGCCTCAGAAGTTTGTG 281446 47 100.0 30 ............................................... AGCCAAAACGCACATTACTGAATCAACGAT 281369 47 100.0 30 ............................................... GTCCTGGAAATTTTGTAGAAGCCCATGATA 281292 47 100.0 30 ............................................... GATTTCTTGGATTGACCCTTGCGGTGGTGT 281215 47 100.0 30 ............................................... CACTACTTGGCCATCCTGAACCACTTCCTA 281138 47 100.0 30 ............................................... CGTCCAACATATCAATAAATTGAATGATAG 281061 47 100.0 30 ............................................... GCCGTCGATTTCCGTTGTCTTCAAAGACAT 280984 47 100.0 30 ............................................... GAAACAAAGTCTGGAAGCTTTGGACTTTTA 280907 47 100.0 30 ............................................... TCATAAGAACCCTTCCAAACTCCTGATAAA 280830 47 100.0 30 ............................................... TTTTTAATTTTTTCCTGCAATGAAGATCCT 280753 47 100.0 30 ............................................... GAAAGAGGAGCAATTCGCGGAGGCAATGCC 280676 47 100.0 30 ............................................... TCAGAACCTTGCAGATCTTTGAGATCATTA 280599 47 100.0 30 ............................................... CTTGAATCCTTACGTTTCCAACCCTTGACC 280522 47 100.0 30 ............................................... TATAAGCAATTTTTAAAGTATCTACATAAT 280445 47 100.0 30 ............................................... ATTCTCAGCATCAGCAACATTCTCAACTTC 280368 47 100.0 30 ............................................... TACTCCTTATTTTGCTCTTCCTCAATCAGC 280291 47 100.0 30 ............................................... TCTCAAAATGCGATACAAAAGGGTTTGATA 280214 47 100.0 30 ............................................... CAGAAACTGTCGTTAACGGTTGTAAAGTGT 280137 47 100.0 30 ............................................... ATACTTCATTTTCAGCGTCAACTATCGTAT 280060 47 100.0 30 ............................................... AAAGGATTTGTTTTCAAGTATGGTAAATCC 279983 47 100.0 30 ............................................... AACTACTGCAATTATCATACAATGTTTTGT 279906 47 100.0 30 ............................................... AAATGAAACCTGATAGAATAATCAGCATAA 279829 47 100.0 30 ............................................... CAATACACTACCAATGGATTGACTTTACAA 279752 47 100.0 30 ............................................... GCTTGTTTTACTACCCAGAAGTAATCAATT 279675 47 100.0 30 ............................................... TATAAACCGTAATGACAACGTATTGTGATT 279598 47 100.0 30 ............................................... GCTTCTTTTTTCAAGGCTTCAAATACTTCT 279521 47 100.0 30 ............................................... CATCTATTGAAAATTTCAGTTGGATGCCCG 279444 47 100.0 30 ............................................... TTGTCGTGAATCATTTCTTCCATTTCATAT 279367 47 100.0 30 ............................................... AAGGTATTTTTCTAATAAAAGAATTTATTT 279290 47 100.0 30 ............................................... ATATACCGATGAAGGGGTTTTAGTTAGATG 279213 47 100.0 30 ............................................... AGTCCCGAATTCAATATCAACATAATCGTC 279136 47 100.0 30 ............................................... TTCTTGTTCAGAATATTGATCTGATATTGC 279059 47 100.0 30 ............................................... AATATTGTGCGCTTCTCAAAGGAATTTATC 278982 47 100.0 30 ............................................... TCTAAAAACTTAGAATCATATTATAAAATG 278905 47 100.0 30 ............................................... TTATCAGTCATAAAGAAATCAGTTCCTGCA 278828 47 100.0 30 ............................................... ATCAGATTTAGATATTAAAAAGCTTTGTGA 278751 47 100.0 30 ............................................... ATCCGGATAATTGGATAAGTTTTATTACTT 278674 47 100.0 30 ............................................... AAAGGATTTGTTTTCAAGTATGGTAAATCC 278597 47 100.0 30 ............................................... AATTTGTTGCATCTTCCTTCGTTCTGTTGT 278520 47 100.0 30 ............................................... ATCAGATATGGAGTTACCAACCTTTGGCGC 278443 47 100.0 30 ............................................... GTCATCCATATTAACATCGATATCACTATC 278366 47 100.0 30 ............................................... AGCCAGTGATATAAATCTGCAGTTCCAACC 278289 47 100.0 30 ............................................... AATTCCCAAACATACCAATGCATCTTTTCT 278212 47 100.0 30 ............................................... TTATGCATCATAATTCCGTGCTTGTTTGTA 278135 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 70 47 100.0 30 GTTGTGAATTGCTTTCAATTTTGAGTATCTTTGAGATATAACACATC # Left flank : TTCATATCCAACATACTTTGAGCAGTTGCCGGACTTGATAAAGAAAATAAATAGGGAAAAGAGAAATAGTAAGAATTATGTTTTATTCCTCGGAAAGAACGATACTGAGAGCAACCAACAGCCTTGTTTAAGTCTTATTCAGTTTCAGATTGATAAAGGAAAATTGGTTTTATCAGCCTATCAGAGAAGCTCTGATGCTAATTTAGGACTTCCAGCCGACCTGTATCATTTGTATTTAATTAGTAGACAAATCAATCTTCCTTTGAGATCGATAACATTGTTTATTGGCAATGTTCATATATATGATAATAACAAAGACTTGACTGGTAAATTGTTGAGCGGTGAGAGCGTGAGGTTTTCTTTGAATGTTTGATGAAAACACCCTTTAAAGATTATTTAAAGAGTGTTTTTTTTTGGACGTTCTGATTTGTTTTTTTTGACATTTTGTTTTGGCGATTATATAACACATCTCTTTTCGTATTATTCCGCATCGTCAGAAT # Right flank : CTCAAAAGTTAATCCACTGATTTTCAGTGGATTTTTTGTTTATTTAGGATTCGAAAATTAGAACAATTCGAGTTGTTGGAAAGTCGGCGGTGGTTCTTCTTTATTCCTGGCAAAGAAGATTTCGATGTCACCAAATTGTTTATCTGTGATACACATAATGGCAACTTTACCTGCTTTTGGCAACATAAACTTAACCCGTTTGATATGGACCTCCGCATTTTCTCGACTCGGGCAATGGCGAACATACATCGAAAACTGAAACAATGTAAAGCCATCATCTATCAAGCTTTTACGAAAGCGAGTCGCATCTTTCATATTGGCTTTGGTCTCCGTCGGCAAGTCGTACAATACTAAGACCCACATAATTCGATAAGCGTTAAACCTTTCGGCATTCATTTTCTATTGTATTACCTGCGATGTAAAAAGTACAATGACCAAACCGTCCATTTATTTGAACTCAGGATAAGAAATCATTCGTTTTTCTCCCGTGTAACATTTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAATTTTGAGTATCTTTGAGATATAACACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.5,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], // Array 2 320528-319402 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOEO01000001.1 Epilithonimonas xixisoli strain CGMCC 1.12802 Ga0171576_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 320527 47 91.5 30 .......C..A............................T.....G. AACAAGTATTTTCTCCGGTGCATACATCAC 320450 47 95.7 30 .......................................T.....G. TCAAGCGTAGAATTACCAGATAAAGCAGAT 320373 47 95.7 30 .......................................T.....G. AACCGGCTTTTTTTGCATCAGTTCTTCTTT 320296 47 95.7 30 .......................................T.....G. GCTGTATGGCTTCCCATCAAGTCAGAAAAC 320219 47 95.7 30 .......................................T.....G. GATGTTCAAGATTCTCTCACTTTTGGAGAT 320142 47 100.0 30 ............................................... TAAGTTTGAAATCTTCGTTTTGTAGTCGTC 320065 47 100.0 30 ............................................... GAAAAAAAACGGAATCAAACACGGCCAGAA 319988 47 100.0 30 ............................................... ATACCAATATCAATTCTGTTGATTCGTCTA 319911 47 100.0 30 ............................................... TAATATTACATTAGAACAAAGTATTGGTTT 319834 47 100.0 30 ............................................... TTTTCAAAATGATTACAATGTCTCGCGAAC 319757 47 100.0 30 ............................................... AAGATAAATCTTTACCGTATTCCAAACGAC 319680 47 100.0 30 ............................................... CTAATACGTCACGCAAAGTCTTGTTTCCTA 319603 47 100.0 30 ............................................... AATTTTAATCTTGCGACTTTATTAATTTTT 319526 47 100.0 30 ............................................... AATTTTAATCTTGCGACTTTATTAATTTTT 319449 47 93.6 0 ...........................................GGG. | T [319407] ========== ====== ====== ====== =============================================== ============================== ================== 15 47 97.9 30 GTTGTGAATTGCTTTCAATTTTGAGTATCTTTGAGATATAACACATC # Left flank : TTCAAGTTTTTGTTCTTCATCTGCCTTCCCAAAGGAATCGGGATAGCAAAAAAGAGCAACGATATTTTATCTTTCAAAAACTTAAGGAAACACTTGAGCCGCTTTTTGATAAAGGAGAACCGATTGTCTTGATGGGCGATTTTAATGAAAACCCTGATTCCGAAGCTATTAAAAAAATATGTTTCGACAAAATGCACAATCAATTGTTAATCAATCCTTTCGAAGAAATGTTTCAAAAAAATCAATTTTCTACATTTCACGACAAACAAGGGATGGTTTTTGATCAGATTATTTTCACCGAGAAAACGCTTAAAGAAAGATTTAATGTGAAAAATATCCGTGCAGAAATCTACACCACTCCCCGACTCCGAAACAAAGACAATAAAAATGGCAAGTATCCTTTTCGCACTTATTCTGGGTCAAGGTTCATCGGTGGGTATAGTGACCATTTTCCTGTGGTGATTGGATTGGAGGGATAATAATATTATTCTTTTGAGGAT # Right flank : ATCCACCACAAAAAGTCAAAAACAAAAAAAAGTGAAAAATTAATTTTTCTTTTATCCATAAGGGTTTCAAAAGAAAAAGCGAAAAAATGGGAATGGTCAAAAAGTAAAATTTACTTCCATTTGGTACCATTTAACTTCCGTACTGGCTGGCTTTAAAAGCTCAAATTTAAGATATAATTACATCAAACATAAGAAAACGCTCGAAAACTACTATTAAAGCAGTTTTCGGGCGTTTTTTTGTTGTTTAAAAACCTATTTAAAACCGTTTTAAAGTTCATTTAACAGATTTCGAACAGCCGTTTTGATATAAAGTAAAAATAGCGAGTGCGGTTATGATTGGGGTTACGTTTGGGGTTACAAAAAAAAGCAAATCACAAATTGAGAGTTTATCGAAATGAAACTCTTAACGGTTCAATTAATACAAAATTACTTTGAGTTGGTAGGGTTATGATTATTTAAAAATCACCGTATTTTAACGTAAATAATTAATAATCAACATT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAATTTTGAGTATCTTTGAGATATAACACATC # Alternate repeat : GTTGTGAATTGCTTTCAATTTTGAGTATCTTTGAGATATTACACA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.11%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [3-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.77,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //