Array 1 83422-85233 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCV01000001.1 Parabacteroides merdae strain BIOML-A21 scaffold1_size430285, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 83422 32 100.0 34 ................................ GCAATGCCTCCAGGAGACGGGAGCCAATCAGAAG 83488 32 100.0 34 ................................ TAATCGGGGTACAACAACTCGAGAAATAGGTAAT 83554 32 100.0 34 ................................ CAAATAGAGCGACCAGCCTTAATACCAAAAAAAC 83620 32 100.0 35 ................................ TCCGAAGGTGGTGCTTTATCTGAATCCGGTTTGGG 83687 32 100.0 33 ................................ AACCTCAAACATTTAAGTAATGGCAAACGTTTT 83752 32 100.0 35 ................................ ACGACGCCGAGCTTGCATAATACGACGTTTAGCAG 83819 32 100.0 32 ................................ CGTCACCCGGCAATGTTGCGAAAAAAGTACTA 83883 32 100.0 35 ................................ CGTAAATACGGGAGTAATACGACCAAGGTCAGTAG 83950 32 100.0 34 ................................ ATCAGAAGGAAGTCGCTTAACGACAACTCGATGA 84016 32 100.0 33 ................................ AGGATTGAAAGAATCAAGACGCTCGCGATAAGT 84081 32 100.0 33 ................................ TTAAGGCCCAGGTGTCTGAAACTTGGTCTCGTA 84146 32 100.0 34 ................................ CAAACGACACAGTTACCATTAGACTCATAACCAG 84212 32 100.0 36 ................................ GATGATTGCTCATTCTTATCCCCTCATGCCATCAGT 84280 32 100.0 34 ................................ CTTATAGCTAAATCCACGGAATTGATTAAGCTCA 84346 32 100.0 34 ................................ CTTAATGGTAAAAAGACATATAATCGTTGGATAA 84412 32 100.0 33 ................................ GCTATCTCGCGTGTGGCGAGTATGGCTCTAAAA 84477 32 100.0 33 ................................ ATCTTAGTTTGGATCGGAAACATCATCGGCATG 84542 32 100.0 34 ................................ TTGAAAAAACATTTCGCAAACAACTGAAAAAGAT 84608 32 100.0 34 ................................ ATGAAGTTGCAAATGTTACCTTAGCATTATAGAA 84674 32 100.0 32 ................................ TGTTATGTCGCGTTTAAAGGATGCTGGTTTAA 84738 32 100.0 32 ................................ TAAAATAGCTAAAAACAACATTTGGGATATGA 84802 32 100.0 35 ................................ CCCGACCAAGCATGGACAGTCACCGGCAAAACCAA 84869 32 100.0 32 ................................ TTGTGCAGCAATGGCGCGCTTTTGGCGTCTAC 84933 32 100.0 34 ................................ ATTGCCCTCAAAAGGAATACAATAATCCCATAAT 84999 32 100.0 35 ................................ GAAATCAACCTTATAAGCATTACCGTCCTCGTCAA 85066 32 100.0 33 ................................ TTACCAGAGTGCAGGAGTTTTTTCGCAATGCCA 85131 32 100.0 39 ................................ GTCCGTTTTAGAATACAACAGTAATAATGCAACTAATAA 85202 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 28 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CCACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.40,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 90914-93123 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCV01000001.1 Parabacteroides merdae strain BIOML-A21 scaffold1_size430285, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 90914 32 100.0 33 ................................ ACGAACATGAGCATAAGCTTCAGCCCATTTTTT 90979 32 100.0 34 ................................ TCAAAACTACGGAACATGATAAAGTTGCGGAGAG 91045 32 100.0 34 ................................ AGGCATATTCAAAGCATCATAGCGAACATTAACG 91111 32 100.0 34 ................................ TCGCCATCTATTGCGCTCAATGGAGAGGGTAATA 91177 32 100.0 35 ................................ ATTTTTGTTTGGATCGGGAACATCATCGGCATAAA 91244 32 100.0 34 ................................ TAGAGATCTCCTGTATGCCTTTTATTGCCAAAGC 91310 32 100.0 34 ................................ CAAGCCTTGCAATCTTTATTACAACCCTTGGAAC 91376 32 100.0 34 ................................ TATGAAAGAATATACCGTTATATGTTTTATAACA 91442 32 100.0 33 ................................ AGGAAGGTGGTGCGTTAAAGCCGTCCGGTCTTG 91507 32 100.0 34 ................................ TTGACATCACCAATTTTATTAAAAACGTTTGCCA 91573 32 100.0 35 ................................ CCTTTAATACGACATACACACCACTACCTTGAAGA 91640 32 100.0 35 ................................ ACGGCGACGAGCCTGCATAATACGGCGTTTAGCAG 91707 32 100.0 34 ................................ TGCCAATTAGAATCAACACGAGAAACGGGTATGC 91773 32 100.0 34 ................................ TTAACAATCGCCGTTTTGATCTCGAGTGTGAAGA 91839 32 100.0 34 ................................ CTCTGGTCAGAGCCCTATGGATCGCGTTTATATG 91905 32 100.0 34 ................................ AATGAATATATTTATACTTTAACAGAACGTTTGG 91971 32 100.0 34 ................................ CCCCTGAACTTAAAGTTGATGCGGATAGAAATAC 92037 32 100.0 34 ................................ CTTTAATTGATGTAGAAACGAAGATGGCTTTAAA 92103 32 100.0 33 ................................ AGAAACAATGCTACTGTAGATAAAGTAAGAATT 92168 32 100.0 34 ................................ TAATGGGGGAACCGTTTTACAAACAGCCAATATA 92234 32 100.0 33 ................................ AAGAGAAGGATTGCCTAAAATCTCATCTCTACG 92299 32 100.0 34 ................................ ACGACTGATTTAGGCCGCATTACTCCGGTATTTA 92365 32 100.0 33 ................................ ACGGATGTAGATACGATCAAAATCCAAGGCCTT 92430 32 100.0 35 ................................ TGATAAAACAGGAATAAAACACAAAAAACCGTTCC 92497 32 100.0 34 ................................ AGGATTGTATGTAAGTGTAATAAAAAGAGGTGCG 92563 32 100.0 33 ................................ CTGTTTGTCTCTTACTCCTTATTCCCAATTCAT 92628 32 100.0 35 ................................ ACGAATATAAATACGATCAAAGCCCAAGGCCTTTT 92695 32 100.0 33 ................................ TTTGAATTTACCCCCTTTAGAGGATATGGAAGC 92760 32 100.0 33 ................................ AAGGTGCTGCCTATGCTAAAACTCTCGCTGAGA 92825 32 100.0 35 ................................ GACTGTCTGAGTAATAGGATTAACAATAATGTCAC 92892 32 100.0 36 ................................ TTATATTGTACATCTATTGCCATCAAATGAATCATT 92960 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 93026 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 93092 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.5 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : AGAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //