Array 1 16025-12873 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMUI01000087.1 Acinetobacter baumannii strain Pesh-27 AB01T_S25_L001_R2_001_trimmed_contig_87_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 16024 30 93.3 30 .................A...........C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 15964 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 15904 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 15844 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 15784 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 15724 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 15664 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 15604 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 15544 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 15484 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 15424 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 15364 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 15304 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 15244 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 15184 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 15124 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 15064 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 15004 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 14944 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 14884 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 14824 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 14764 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 14704 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 14644 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 14584 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 14524 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 14464 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 14404 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 14344 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 14284 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 14224 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 14164 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 14104 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 14044 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 13984 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 13924 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 13863 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 13803 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 13743 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 13683 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 13623 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 13563 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 13503 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 13443 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 13382 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 13322 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 13262 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 13202 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 13142 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 13082 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 13022 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 12962 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 12902 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //