Array 1 82-403 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLBR010000012.1 Micrococcus luteus strain S/N-202-OC-B6 S/N-202-OC-B6_contig_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 82 37 100.0 36 ..................................... AGGTCGAGGCCCGCGTCGGTGGGGTGTGCCCGGGTC 155 37 100.0 34 ..................................... CCGGGCGGGCCGTCCCGGAAACGAAACATCTCGC 226 37 100.0 35 ..................................... TCACGGAACAGGGCGACGGCGGAGAACCGTTGACC 298 37 97.3 33 .............T....................... GAGGAGTCGGTGGTGCTGATCGGCCCGCCGCGC 368 36 86.5 0 T............T..................-..CT | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 96.8 35 GGTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : CCTATGGGCAGCTTTTCATGGCCGCTTACAGCGGACTTCGTTGAGGCGGGGTGCCCGGCTTCCACGTCATCGTGGACGTCAG # Right flank : TCTCTAGGTGTGATGTCCAGGGAGGTTGTTGAGCCTGGTGGCAGGCGCGGCGCCGATCGCGGAGTGGACGCGATGATGATTGTAGAAGTGCAGCCATCCAGGCAACGCGGCCCTGCGCTCCGTCTCTGAGCTGTAGAACCGGGCGTAGGCCCACCCGTCAGCGAGCGTGCGATGGAACCGCTCAATCTTCCCGTTCGTCTGCGGCCGGTAGGGCCGAGTCCGCTTGGGCTTGATCCCGAGCTCGGTGCAGGCATCACGCCAGGCATGCGAGTGGTAGGCCGAGCCGTTGTCCGAGAGCACCCGCTCCACCTCCACGCCCAGGCGCGCGAAGTGGGCGACCGCGCGGCGCAACACCGCGATGGCCGTCTGGCTGCGTTCATCGGAGTGCATCTCGACATAGGCGAAGCGGGAGTGATCATCGATCACGGTGTGCAGAAAGCCCACCCCGAGCCGGGGCTGGTATCGGGCATCACGGGTTCCTTCGCGGTCCGAGGTCGCCG # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.20,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 55535-55807 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLBR010000029.1 Micrococcus luteus strain S/N-202-OC-B6 S/N-202-OC-B6_contig_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 55535 29 100.0 32 ............................. CGGAGGGACACGGTCTCACCCGAAGTGCGGAA 55596 29 100.0 32 ............................. ATTTACGGCAACGACTGGGGCGGCATCTACGG 55657 29 100.0 32 ............................. TGTCCCTGTCCAACCCGGACCTTCCCTGGTTG 55718 29 100.0 32 ............................. CAGATGGCGGCCTTGAATCGGATCGAATACCG 55779 29 86.2 0 ......T....C.G..............A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.2 32 GGAAGCCCCGCGCACGCAGGGATGAGCCC # Left flank : GGCCGCCAAGTCCGGGTTGAACCGGGCGATCCTGGATGCCGGGCTGGGGATGCTGCGCCGGCAGCTGGACTACAAGACCTCCTGGGCAGGGTCCCAGGTGAAGATGATCGACCGATTCGCGCCCTCCTCGAAGGCGTGCTCGCGCTGCGGGACAGTCAAATCCACGCTGTCCCTGGCCGAGCGGACCTTCGAGTGCGAGGCCTGCCACCTGGTGATCGACCGCGACGTGAACGCCGCGATCAACATCCGGGCGTGGGCTGTGCAGGAGGAGCGTGGAGAAGGGGTCGAGCTCGCCCGAGGCCGTCGGGAGAGTCGAAACGGACGTGGAGCTGCTGTCTCGGGCCCGCCATCTGGCGGGGCCGCGGGGCAGGGGCGTGGAAGCGTCAAGCCCGCACCCCAGGGTGTGGGCATGTCCAGCCGGGCAACTGGCTGGTCATCCCAACCCCCCTCAACCGAAGGGGAAAGCGCAGAGCGCGGAGCATCCGCCCTGGCCAGGTAGT # Right flank : AGACTCCCAGGGGCATTCACGGCTCCTGGGCTGAGCTGTCGTAGGGATCTCGGCTGGTCCCCGGTCCTTCCTAGACGCCAGCCAGTGCTCGTGACAGCTGCGGGTGTCGTGGAGGTGCTGCGGGGACGTGTCGCGGTGTCCGCGGGATGCTCAGCTGGTGGGCTCGGGGACGGTGGCCTCGCACTGGACCATGGGCATGCCCTCGGGGTCGCCGGTCTGGGCGTCCAGGGGGGCGGTGGTGCCGTCGGCGATGATCTCGCAGTGCAGGTCGCCGGCGGCGGGCAGCTGCGGGACGTTGGCGATCACCTGGATCTTTTCACCGGACTTGGCCTGGGTGCGCAGGATCAGGGGGGTGGTGCCGGCGGGCTCGGCGGGGATGGTCTCTTTGGTGTGGGTGTCCGCGCCGGTGCCGCCCACGAAGAGGTTCACGCCGCCGCGGGCTGCCGTGGTGGTGGTGCCGTCGCGGGGGATCCACTGGATGCGGATCTGAACGTCCACGG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAGCCCCGCGCACGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 2066-23 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLBR010000129.1 Micrococcus luteus strain S/N-202-OC-B6 S/N-202-OC-B6_contig_129, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2065 36 100.0 36 .................................... CAGGCAGGCCAGACCGGGGAGTTCACCGTCACCGTG 1993 36 100.0 34 .................................... TCCGTGGCGGGACCATGTATGCGATCTGGCGGAC 1923 36 100.0 37 .................................... GCGGCCCACCACGACGCCCTCTACCGTGGCACCCTGA 1850 36 100.0 35 .................................... CGGGGCCGTTCCGTGCTGGGCATCGACCCCGGGTT 1779 36 100.0 35 .................................... GACACAACCCCGCCCGAGGAGACTGCAACCCGCGC 1708 36 100.0 38 .................................... AACAGCTCATCGGTGGCCACGGCGTGCGCGCGGGCCTG 1634 36 100.0 37 .................................... GGTCACGGCAAGGATTTCGCGCGGGGCATCGCGTCCA 1561 36 100.0 35 .................................... CGGATCGCGTCCCCGAGGTCCCGGATGGACTCGCC 1490 36 100.0 36 .................................... TTGCCGATGACCTGGCTGGACACGTCGAGGCCGTCC 1418 36 100.0 35 .................................... GAGCCCGGAGACGTGACGGTGGCGAGGTCGCGGGT 1347 36 100.0 36 .................................... ATGAAGGCCACGGTGCCGCTCATGGTGTCCAACGCG 1275 36 100.0 35 .................................... GGGCACACCGCCGTGGTCATCGGCAACCCGTCCGG 1204 36 100.0 34 .................................... CAGTCAATCCGCAACCACCAGAAGAAGCACATGC 1134 36 100.0 35 .................................... GCACCGGACGCGGTGGTGACCGAGCTCCGGGCCTG 1063 36 100.0 39 .................................... TGAACATCGGTGAGGCGGGGGGTGGTGTGTCCGGCACGT 988 36 100.0 35 .................................... GTCACCAGCATCGCCCCGGGTCCCCAGCCGCGCGC 917 36 100.0 34 .................................... CGTCAGCAGCCGTCCGGTGAGCTGGCGCAGGTCA 847 36 100.0 34 .................................... CTGGCCGTCGCCAACGACCCGGACGAGGCCCTCC 777 36 100.0 34 .................................... CAGGGCATCAACCGTGTACTCGCCCCCATGTGGG 707 36 100.0 35 .................................... GGCGACTGGGAGACGAGCGGCAACCGCAACCCTGA 636 36 100.0 34 .................................... CCGGCGCAGTGGTGGTCCGTGCAGGACTACCTCG 566 36 100.0 37 .................................... GTCGACGGGCGCTTCATGTACGCCGCCGTCTGCTCCG 493 36 100.0 40 .................................... GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCGA 417 36 100.0 34 .................................... TGCGTGTAGGAGCCGCCCAGGTGGCCGGCCAGAA 347 36 100.0 38 .................................... ATTCCGCGCCAGCACTGAGATCGGAGGGGGCCCCCATG 273 36 100.0 40 .................................... GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCGA 197 36 100.0 35 .................................... TGGTTGCGGTTGATCCATTCCACGCCTGCCGCCCG 126 36 94.4 34 ......C................G............ GCAAGCGGCGGGCCGCGATGACCGGCCCCATCCC 56 34 83.3 0 ...........C..............--..CA...G | ========== ====== ====== ====== ==================================== ======================================== ================== 29 36 99.2 36 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : GTTGAGTGCCCGGGATCGTCTCCGGAGGAGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCCCGGGCGGCCCGCGTCCTCGAAGGGTTCGGAGATCGAGTCCAATATTCAGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTGCAAGCAGCCCTCGAAGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCTCTGTGGATGGGCCCATCATCATCTGAAGCGAGCCAGGGACCTTCGCGAAGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTCATGGGTCGAGGCCGATAAGCATGGCGCTCCACGGACGCCTCTTGAGCCCAGGGCTCGCCGACGGTCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGCT # Right flank : GCCATTGAGTTCTGCCCATAGGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //