Array 1 193349-198160 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXD01000001.1 Rubrivivax gelatinosus strain DSM 1709 Ga0310528_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 193349 36 97.2 35 ...................G................ CGGCGGAAGGCCTCGACTGCGGCATCGGCCTCGCG 193420 36 100.0 36 .................................... TGTGGCGAAGGTAGTGCACTCCGCGGACGGGACGCA 193492 36 100.0 37 .................................... CTCCACCGCGCCAGGTGAAATCCCCCTTGACGTCGAT 193565 36 91.7 37 .............AT..A.................. CACAGCACGCTCACCGCCTGCTGCACCTTCAGCTGCA 193638 36 97.2 37 .......G............................ GTCGCCAGTCATCGGCACCTCGACTGGATCGGCCAGG 193711 36 100.0 38 .................................... ATCGACGTTGCCGCGCTGGTGATGCCCGAGGCGGCCTC 193785 36 100.0 35 .................................... ATCAGCGTGGCGTCGTCATCCTTGGCCGACGCCGG 193856 36 100.0 35 .................................... CTGGCGGCCATCATGCGCGACGACCAGACCATGAT 193927 36 100.0 35 .................................... GACAATACCTCGCTGTGGGTCGTCGTATGGGGGCC 193998 36 100.0 36 .................................... CTGCCCGGCGAGCTTGGTTGCCAGCAGCAGGTTGTC 194070 36 100.0 37 .................................... GCGACCGGCTACCGCGGCGCGGCCAGCGCGACCGGAG 194143 36 100.0 36 .................................... CTGGTTGCCCATCAGCAGGCCGCTGGCGGACATGTG 194215 36 97.2 37 ...........C........................ CTGGACTCGTCGCCGATCAAGATCCCGCTGGCTGCTG 194288 36 100.0 36 .................................... CGGCCGCACCATGTAGTCGATCGCCTCGGACTTGCT 194360 36 97.2 37 .............T...................... CAGGAACAGGCTCGGCGCGACGAGGCCGAGAAGCAAC 194433 36 100.0 36 .................................... CGGCGTGCTGCGCACGGCGTCATAGACCGATGGGTC 194505 36 100.0 36 .................................... GGCCAAGGTATTCCTTCAGCTGCTCGGCACGCACGC 194577 36 100.0 38 .................................... TCGTGCCGCGACAGGTCGCCGGAATGCTCGACGACGGC 194651 36 100.0 36 .................................... GTCGCGGCGCAGTGACACGTCGAGCAGCGCGGGATT 194723 36 100.0 38 .................................... CCGAGCGCCGTTCTGGCGCACCGCTACCCCAACACGCC 194797 36 100.0 37 .................................... GCCACATCGTGGCGACGGCCTGCCACGTGCCCGCCTG 194870 36 100.0 36 .................................... GGGCGCCGGCGGGTCCCAGTCGGTGGCTGCGGTGTC 194942 36 100.0 36 .................................... GTCGCGCACGCGCACGCCGCCGCCCGAGTCGGCGGT 195014 36 100.0 35 .................................... GTGTCCGGCCGTCAGCGCTGGAGCGGCGCCGACCT 195085 36 100.0 34 .................................... CGGACGCCGAGCCGGAGGCCAGCAGCGATGAGCA 195155 36 100.0 36 .................................... GAGGAACTCCTTCATCGTCAGCCGCTGGGGCGTGGC 195227 36 100.0 35 .................................... ATCGCGTGGAAGCGCGACGGGCACGTGAGCGTCAG 195298 36 100.0 36 .................................... GAGCTACCGCAAGGGCCGCGCGATCCGCGACTACGT 195370 36 100.0 36 .................................... CAAGATCGCGGCGCAGCGTGAAGCGGAGGCCGAGCG 195442 36 100.0 37 .................................... AGCGACGCAAGGCCACGGGGCGATGGGAGTACACCTT 195515 36 100.0 36 .................................... CTACCTCGACGGCATCAGCACGACGACGGGCAGCGT 195587 36 100.0 35 .................................... GCCTATACCAGCGCGACGACGCGGCGCAGCTTCAC 195658 36 100.0 36 .................................... CGCCTCACGGGCGCGCTCGACGTGCGACAGGCCTTT 195730 36 100.0 36 .................................... CCGCGGCAACGTGGGCGCCGCGTCGCAGGCCGCCGC 195802 36 100.0 36 .................................... GGGCCGAGTCATCGAGTTCGTGCACCGGGTCAAGAC 195874 36 100.0 35 .................................... CCGCGTGGCGCTGGGCATCAGCACGCGCGAGGCCG 195945 36 100.0 36 .................................... GCCGGCCGCGCGTCTGCAGGCGATCTCGACCTGGCG 196017 36 100.0 36 .................................... CGGCAGCATGCTGCGGTGGGTGAAGCGTCGGCCGCG 196089 36 100.0 38 .................................... CTGACGTACTGCTTGACCGCGGTGACCTCGGCCTTGTT 196163 36 97.2 38 ...................G................ ACCTTTTCGCCGACGCGCAAGCAACTGCTTGTCCTGCG 196237 36 97.2 36 ...................G................ CTCCCTAGCTTTGCGCGCGCCGGGTAAGCCCGCTTC 196309 36 97.2 35 ...................G................ ATCGCGATCGGCCTCGTCGTGTAGTTGGACTCGGC 196380 36 97.2 37 ...................G................ CCACGAGCGTCTGCAGGGTGCGGCGGGCGAAGGTGTC 196453 36 97.2 36 ...................G................ CCACCAGGGGATGCTGCAGAACCTGATCGCCAACGA 196525 36 97.2 37 ...................G................ GATCGCCATCCGCGAGCACAGCGCCGACGATCAGTCG 196598 36 97.2 36 ...................G................ CTACGCCCGCGAGCTGCAGCGCCAGCAACGGAACGC 196670 36 97.2 37 ...................G................ CGCCGCGATGGGCTCGCCGCTCGCGAGCGCAACTGTC 196743 36 97.2 35 ...................G................ AGGTGCTCGGCCTTGCTGGTGATGGTCGACAGCGG 196814 36 97.2 37 ...................G................ CCGAGCGTCACGTAATCAAAGACGTTTGCCACGAGCC 196887 36 97.2 37 ...................G................ AAGGCCACGGCATCGGCGCAGTCATCAGCCGCTCCGA 196960 36 97.2 36 ...................G................ GCCCGCCGCCTTGCGCTGCGCCCGGTTGCCCGTTTC 197032 36 97.2 37 ...................G................ GCTCCACTATGCTCGGCTGGCACCACGGGCACCTGGC 197105 36 97.2 45 ...................G................ GCTTCGGCGCCTGCGCATCGGCGGCGGCCAGGGCGGCCACCGCAT 197186 36 97.2 35 ...................G................ GCAGTGAGGCCCGTCGGCACCCAGGATGAGCCATC 197257 36 97.2 37 ...................G................ CCGCAATCGACGAGGCCATCGAGCGGCTGCGGGCTGC 197330 36 97.2 36 ...................G................ CCGGCGGCCGCCGTCGAAGAAGCTGCGTTGCAGCCT 197402 36 97.2 38 ...................G................ TTCCTCTGCGGTTACGCCTTCAGCGTGGGGGAGTTCTC 197476 36 97.2 36 ...................G................ CCCGACATCTGCATCGCTACCTTGACGGGAACTGTG 197548 36 97.2 36 ...................G................ CTCGCCGACACGCTTCAAGCCTTGGAGGTCTGCGGT 197620 36 97.2 36 ...................G................ GGCGCGCGCGCTGCAGATCAGCGTGCTGCGCGCGGA 197692 36 97.2 36 ...................G................ CCGGTTCGCTCGAGACTCGTTCCTGAACTACGAGAT 197764 36 97.2 36 ...................G................ TGGGGCCGTGCCGGCACAGAACGACGCGCCCGGCCA 197836 36 97.2 36 ...................G................ GCCGCTGCCGGCGGGCTTCATCGACGACGGCCTGCT 197908 36 97.2 36 ...................G................ CCCCATCGTCGACGGGAAGCGCTGGGCCATGGATTC 197980 36 97.2 38 ...................G................ GTCCGTCGCGGCGTCTCGCCCGGCGCGCTCGGCTTCCT 198054 36 97.2 35 ...................G................ CAGGTAGGTCAGGCCGAGCAGCACGCCGTCGGAGC 198125 36 97.2 0 ...................G................ | ========== ====== ====== ====== ==================================== ============================================= ================== 67 36 98.5 36 GCTTCAATGAGGCCGAGGCAGAGCGCCTCGGATGAC # Left flank : GTGCTTGCGCACCGTGAGCTCGCTGATGCCCAGCTCGCGCGCGATCTGCCGGCAGGACAAGCCCCGGGCCATCGCCTGGACCAGTTCGGTCTCCCGGCGCGTGAGCGGCGGGGCGGGCCGGTCAAGGGTCACGGGCGCGCCGGACCATGGCGGGGCGGCGACTGGCCGTGACTCATGCCGTGACCGTCGGCTGGGCGCGTGCACGCGCCCGCATCCCGGATGCTGCGTTCCATGAGGGGCCTCCCTGGCCTTGCCGACGACTCGCCGCGCCCAGGGCCCAGTGGTGATGAACGCCGTTCAGCCGAGATCTCCATCTCGCATCGGTCGCACCCCGTCTGCCGCAAACGCGAGAAACGGTCGTCGGTCAGTCAGATCGTGATGGAACACGATGCGCACGAGGATGTCGACGTCGGGGCGGGAAGCCATGATTTGTCGAAGTGGAGGCTGAGCGCCTCGGATGACGGCCGGCCCTTCGAACGCAGGTTGCGCGGGTTGCTCGT # Right flank : CAGGCCTTCGCAGAACGCCCGCCAGCACCGGATTTTGGCCCGCATTTGCGAGCGCTCCCGGGCCGAAGACGCGGCGGGCGGCAGGGTGCGGGCAGGGACCGACAGCGGGGTCATGCAAGTGCTTGTCAGACAGGCGCTTTGCGCTGCGCGAGCGCTCACCTGGGGCGGCCGCCAGCACCACAGCGCTCGCGGCTCCGCGGCAGGCCGTCATGCTGCGATCAGACGATCGTCGGCACGCGCTCGATCGGCACGAAGCTGCGCTTGCCGAGGCTCTGCACGCGCGGCTCGACACGGTCTGCGGGGCCGAGGTCGACAATCAGAACGTGATCCTCGGACGGCGCAATCGTGTCGGTGACGCGCGCCATCAGTTCGGCACGGCGCATGGCACCAAGCCGGCACTGGAACACCGACAGCTGCATCCACTCGCCGAAGCCGTTCATCAGCTTGAACACTGCGCGCCAGCGCCGCTCGTCGGCGATGTCGTAGGTCACGAGGATCAG # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGAGGCAGAGCGCCTCGGATGAC # Alternate repeat : GCTTCAATGAGGCCGAGGCGGAGCGCCTCGGATGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //