Array 1 11687-8957 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMCF01000024.1 Vibrio navarrensis strain 0053-83 contig24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 11686 28 100.0 32 ............................ ACAATCACCCGTCAGGTGTTGCAGAGCCATCG 11626 28 100.0 32 ............................ TCAAGCATGACACTCTGACACCCTACGGTGAC 11566 28 100.0 32 ............................ CTAAGTGCCTTTAAGTAAAAAAAATAAGGTAG 11506 28 100.0 32 ............................ ATTCTCATCAACCCAGTACTCGAACTGGTCAT 11446 28 100.0 32 ............................ AATCACCTGAAAAGCTAAGAAAGCAATTTGGA 11386 28 100.0 32 ............................ AGTAACCCACATCGAATATTGACACTGGGTGA 11326 28 100.0 32 ............................ AAGAACAGAAGTGTCATTGATTACGAGTCCCA 11266 28 100.0 32 ............................ AAGACAAAAGATATATCAACGCATGTGTTGAT 11206 28 100.0 32 ............................ AAGTTGCAATGGATGGCAAAATCAATAAAAGG 11146 28 100.0 32 ............................ ATCATGCTGATTGGCGACACTTTGGTTATTCC 11086 28 100.0 32 ............................ TGCTGAATTAGACAAAGGTTTTGTTCCTCCAA 11026 28 100.0 32 ............................ TTGCACTGCGCAGGTTGGCGTAACCGGTTCAC 10966 28 100.0 32 ............................ CAAAAATTCTTTCTGATACGTTTCTCACTGCT 10906 28 100.0 32 ............................ GGAACCGGAACCGGACCCAACGCATACCCCAA 10846 28 100.0 32 ............................ TCTTGAGGCGCGAGCATCAAGTAACCGTTGTA 10786 28 100.0 32 ............................ TCGTTAACAGTGAGTTCCATTTGTTTCACCTC 10726 28 100.0 32 ............................ TCACTGGTCGGTAAACGCACGATGTTTGATGT 10666 28 100.0 32 ............................ GCAATATCAGCCGCTACTCAATGAATTGTTTG 10606 28 100.0 32 ............................ TTGGCGTTACTAATGTGAATGGGTACGCTTCT 10546 28 100.0 32 ............................ ATACTCAGATCCTTACCCTTGGATTAAAAAGG 10486 28 100.0 32 ............................ TTACCTTCCTACAGGTATCCGCACAAAAGTAG 10426 28 100.0 32 ............................ AGCCGCGCCAAGAATTGAACTGCGCAAGTTAA 10366 28 100.0 32 ............................ TTACGCTGGAGATACTCCAGCGCTTGGTCAAT 10306 28 100.0 32 ............................ TTGCGCCTATCATCAACCCACTCAACCTCACC 10246 28 100.0 32 ............................ TGACATTGGCTTCAAAAGTCTGCGGCATTTTT 10186 28 100.0 32 ............................ TTTTAATGTCTGGCCACGAACTCCGGCCACAA 10126 28 100.0 32 ............................ TTTTCAAGCAAGAAATGCTCTTGCTCGTTTAA 10066 28 100.0 32 ............................ AGCGTCGAATCGTGACGGGCCGAACGTGGAAA 10006 28 100.0 32 ............................ GACCAGCGAGGTTAATAGCTTGCCAGCCTCAC 9946 28 100.0 32 ............................ ACCCTGTTGCAAGAAGACGGTTAACGGGTTTT 9886 28 100.0 32 ............................ CGCCACGAATGGGCGTGGCCTTGCCCGGATTG 9826 28 100.0 32 ............................ ACAACCCGAAACATGCGCCGATTTAAAAGATA 9766 28 100.0 32 ............................ ACTGACACGTTTTTCAGGAAACGTCGTCCTCG 9706 28 100.0 32 ............................ CATCGCAAGCAGGCCGGAAGTTGTCGCGCCAA 9646 28 100.0 32 ............................ TTGAATCTGGACTCTCTCTCAAACGGTGAATA TG [9633] 9584 28 92.9 32 ...........C.C.............. CAAATTTTGCTTTGGCTCTTGCTTTGGACCAT 9524 28 92.9 32 ...........C.C.............. ACTTTAAGAGCCTTATAGCCAGTCACCGACAC 9464 28 100.0 32 ............................ GCGACGGAATGCTAATCGCTCGCCATCTGTGT 9404 28 100.0 32 ............................ TGCAAAAGCTCAGGTGACATCGTGGTACTTCA 9344 28 100.0 32 ............................ AGCTTCTTACGCATATCGATGTAAAACAGCAG 9284 28 100.0 32 ............................ ATGCCTAATTGGAGTGGTGAAAGCATCCTTGA 9224 28 100.0 32 ............................ AAATATCCGAACGTAAGTGCGGCTGCGAAGTA 9164 28 100.0 32 ............................ TGAATGGGCACCGCCAAACCGGAGGATAAGCG 9104 28 100.0 32 ............................ TCAGCGCCATCGAAGACTGGGGTACAAAAAGT 9044 28 92.9 32 ...........C.C.............. CGAAGGTGAGGCAAGCAGCGGAGATAGCACGT 8984 28 89.3 0 ...........C.C.......G...... | ========== ====== ====== ====== ============================ ================================ ================== 46 28 99.3 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGACAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATGGTTGCAATAGGTGGCTTTTAACAAGGTAAAAAGATGATTTTTACTCTAACAGCCTGTTGCAGCTTATTTTTATCGCTTTATTCTATT # Right flank : ATAGTAGCGTTGTAACATGAGGAGATACTATCAAGCGTGCTAAATATGACCCTATTACCGAGCAGTTAACTACTGTTCTGAACGGTTAATAAAGATTTATTCATCACTGATGAAGTTACGCGTTAGTAAGATTTTCTATATTTTTTAGCCAAGTATCAAACAAAGGGCATTTCTCACGCATGGTTTCTAGACCCACTTCTAAAGCTGCCAAAGTTCCTAAAAGTGGTTTTTCATAACCGAAAATATGGTTTTCAATGCGCTTACTCGGTGCCGTTTGTGGGCTGTTGTTGATATGTTCTGGCGAGTCGAAGCTGTTTGCGATCTCGGTAAAGGCCGTTTCCAATTCTATTTTATCCATCCCTTGAGCCATCTTTGTCGGATCGCTAAAGAGCAGTGCTTCAAACTCATACATCTGCACGTAAGGGATAAACCGACGCATAGCGTTCGCACCGATTTTCTCAGTCAATTTTTCTGCGAAGGCGTTTTGTAGTATTTGAGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //