Array 1 459816-454892 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWCH01000012.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 459815 33 100.0 33 ................................. CGCCTCATCGGCAAATTGTTGGACCGACTGCAA 459749 33 100.0 33 ................................. CCACACGCAAAATTGTAGGCAAACAGTATTGGC 459683 33 100.0 33 ................................. ATTTCGAGAAAACGCGCAAGCTGCCCGTGAGTG 459617 33 100.0 34 ................................. CTACGGCGAGATGTTCGGGCACGACGACTGGTAC 459550 33 100.0 35 ................................. CGGCACCAGACCACCACGGGGGCGTTGGGGTTTTT 459482 33 100.0 33 ................................. AAATAGGTGGTGGACTGCTTAATCTTATCCTTG 459416 33 100.0 35 ................................. AAAATCTATTCGGATGGATAAGGCGGGTGAAACAG 459348 33 100.0 34 ................................. CGACAACGATCTGCTGGTAATCCGAGCGAGCCAG 459281 33 100.0 34 ................................. TTATTTGCTCCCCTCTGCATTTCCCCGGCTTGGG 459214 33 100.0 34 ................................. GACTGCTTGATACCAATGGGGACGGGGACTCAGA 459147 33 100.0 34 ................................. CCTGCTTGCGAAAAGGGTTAAAGCCTACTTCCAG 459080 33 100.0 34 ................................. CTCTGTCCCGGATTGAGGGCAATCAGGAAGGGGC 459013 33 100.0 33 ................................. TGCAATGCGCTTGAAAAGGCTGGCTATTATGTA 458947 33 100.0 34 ................................. TTTGATTCTGATTGTTGGGCTTTCCTTGTGAAGC 458880 33 100.0 35 ................................. TATCAATGACGCTTGACGAACTGAAACAAATGCTG 458812 33 100.0 33 ................................. GCTAGTGTAGCTCAATTAAGGCAGAGCAGCCGC 458746 33 100.0 34 ................................. GTCACGGAGATAACGGTGATTGCATAAGGAGGGA 458679 33 100.0 34 ................................. ATCATCATCCGATTGGACGGTGAAACTCCAAACC 458612 33 100.0 34 ................................. GTAGAATTTGCTTTAAATGGCTTGAAACGGTTCC 458545 33 100.0 35 ................................. GTGATTGGATGGAGCATTATAACCCGGCAGATTAT 458477 33 100.0 34 ................................. GGGATTATGACAGCTTAGAGGCTGCAATCGAAAG 458410 33 100.0 35 ................................. CCGGATGATGAAAGCTATCAGCGTCAAAAAGCCAG 458342 33 100.0 38 ................................. GCCCGATGGTATCACATGGACAGTAAGAACGGCAGCAG 458271 33 100.0 35 ................................. CTTCGCTGCAAGAAGATTTACCCGAGGACGAAGAA 458203 33 100.0 34 ................................. TCAAATGGCCTGCGCTACCCGGGAGACCCGGCAT 458136 33 100.0 33 ................................. ATCGGCAACTTGTTTTTGGGTCAGGCCCATTTC 458070 33 100.0 33 ................................. CGTCATGGACGAGGTAGAAAACGGGGCCAACCG 458004 33 100.0 34 ................................. ATAGGGAAAACAAGCACCGTGCCGATATGTATGA 457937 33 100.0 35 ................................. TCCCTCCTGTATCCTTGATTTGTTGAAAATTACTG 457869 33 100.0 33 ................................. CCGTCGCCAAGATCGGCAAGAGCCTGTTGATTT 457803 33 100.0 35 ................................. CACAGGTCGGGCGGGGCGTAGTAGGCGGTGATCGC 457735 33 100.0 35 ................................. GGGAGGTTCGGGACGCTAAATTAAAAACGCTTGAT 457667 33 100.0 33 ................................. GGTTAACAGAGCCAAAGCGGAGTATGTATACAG 457601 33 100.0 33 ................................. CCAAAGTGTAGCCGCAGAGTATAGAGATAAAGA 457535 33 100.0 34 ................................. ATCCATGCACCAGCCCTTGTTATTCGAGACAATA 457468 33 100.0 34 ................................. GCCATCTATTCCACCTCGAATGTCAAGCCTCTGT 457401 33 100.0 35 ................................. TGTTATATTCCAGAGTGCTATCCTTAGCCGATCTT 457333 33 100.0 35 ................................. GATCATATCTATAATGGGCTGGATTTTGGATTTGC 457265 33 100.0 34 ................................. ATCAAATAAGCCAAGAGATTTCAACCTTGCTTCT 457198 33 100.0 36 ................................. GTTAAGGCGGAAGTGGATAAGACTTTCAAAGATAGC 457129 33 100.0 34 ................................. AGGCGCACCCGAGGTCATCAAGATTTTGCCCCTG 457062 33 100.0 33 ................................. ACGAATGCGCTAGATTGCTAAACAAGTCCCCGC 456996 33 100.0 33 ................................. ATGAGCGAAGAATATATACGCCTTGCCGAAGAT 456930 33 100.0 33 ................................. ACTCTTGGAATAATATTTTTAGCAACCGTTACC 456864 33 100.0 33 ................................. ATACAAAGAATCCATCATAGTGGAAAAAGCCCA 456798 33 100.0 34 ................................. AAAGTGCATTGCCGAGCTACAGGAGAAGGTGACA 456731 33 100.0 35 ................................. ATGTCCGCCGCTGACAAGGCAAAGCTAGATACCAT 456663 33 100.0 33 ................................. ATCCCGAGGGGGAAAAATGTATTGCTTCCGAAC 456597 33 100.0 34 ................................. ACCATCACCGAGACGGATTATATCGAGGAAATAG 456530 33 100.0 33 ................................. GCCCATCGATGTGTTTGTGATCGAATACCGCAT 456464 33 100.0 34 ................................. GAGATATGGCGGATAATGCTAACAAAATGGGCAC 456397 33 100.0 34 ................................. GCGATCAGCACCGGCGCTATATTGGTCGGATATA 456330 33 100.0 33 ................................. TATTCGCACCCTGTCTCCCGGCGAAAATAATAC 456264 33 100.0 33 ................................. TCAGAACCAAATTTAACTGATTGGGAAAAGGTC 456198 33 100.0 34 ................................. TGCGAGATTTTTGGTATCCCGCTGCGACTGGGCA 456131 33 100.0 35 ................................. GGTCGTGGTTGCATAGCTATAATGATATACGCCAT 456063 33 100.0 33 ................................. ATCCAGCGGCACAATTTCCAGACAAGGGAATCT 455997 33 100.0 33 ................................. CTATATTCCAGTCCTTTTTACCCATTGTTAAAG 455931 33 100.0 33 ................................. TGAAGCCGTCAAGCAGCATCTCCAGGCGAAGTG 455865 33 100.0 34 ................................. TTCCAGAGGTGCTTACCAATGGTACCGCCGACAA 455798 33 100.0 33 ................................. TGCCGATGGCGCGCGTGCTGGTAAACCATATAC 455732 33 100.0 34 ................................. CGTAAGTATGCCTGTGTGGAGGACTCCGTTGCAG 455665 33 100.0 35 ................................. ATGTTCGGTGCGTTGAATATGGAGAAGTTGGTAAT 455597 33 100.0 34 ................................. TTTTTCCTGCTTGAATAAAGCGGCTTGCCCTTCC 455530 33 100.0 34 ................................. CTTAAAATAGGTGATATTTTACTACCGTTTGTGC 455463 33 100.0 33 ................................. CGTCCAGAAACTCCGTGAAAACAACCAGACTAT 455397 33 100.0 34 ................................. ATCAGTGGGAAGCCACTGATTAAGCCCCAAACTC 455330 33 100.0 33 ................................. GCCAGGGAATAGGTGGCGAACAGGTAGCGGCGG 455264 33 100.0 36 ................................. GCGGTGTAATTCCTTGGGACAAACGAAACGCGCGCC 455195 33 100.0 35 ................................. CGTGAGGGTGTCCAGAAGGTCCTCGGGGTCTTTAA 455127 33 100.0 35 ................................. CGCAAGGACGTCACCGATGACACCGTCGTGATCTT 455059 33 100.0 33 ................................. CAAAGATGGGGGCGTAGCGCTTAAGAGCGCCCA 454993 33 100.0 36 ................................. ATCCCGCACGAGATCGGGAAAGACCGTAACAGGCGA 454924 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 74 33 100.0 34 GTCGCACCCCTCACGGGGTGCGTGGATAGAAAT # Left flank : TTTTTATGGAAATAAAGGGGTTTAACGATGTTGGTTCTCATCACCTATGATGTCAGCACCGAGGACGCAGCAGGCCGTAAACGCCTGCGTCAGATTGCCAAACAATGTGTCAATTATGGCCAACGTGTTCAGAATTCGGTATTCGAATGTCTATTGGATGCTGCGCAATGCCGCTTGCTCCAATCCAAACTTTGTTCTATTATAGATACAGAACGAGACAGTTTAAGGTTTTACTATCTCGGAAATAAGTATGATACTAAAATTGAGCATTTTGGCGCCGGCAAAAGCTATCAGCCCGAGGGCCCGCTGATCATCTGAGCTGTGCGAAGCATAAGCAAACACCTTTTCACTGATGTTTCGCACTTATCTTTTTTATTAAAAAGCTATATTTTAAGAAATTTTATCTGTTTTAATCGTTTAGATGGGCTATTTTATTTGATATTCCCATTGATATTTGACAAAAGTGGCAAAAGATTAAAGCTATATCTGTCATTTTTGCG # Right flank : ACCAATGAAAGATATTATACATTTAAGCGCACAAGACGAAGAAAGTTCTCAAGTAGATCAAAGAGCGGGATTAAATAAGCCATTACAATCAAGAGCGGTGTTTTTTGATAATAAAAGAATACCTTATCAGAAGAAACCCTGTGAGAGCATTCAATTCTTTTGGAAAAAGCTAAGGGATACTGGTAGTGATGTCTCTTTTCCTGTTAAGATTTATGAGAACAAAGGGAGGGGCTTATTTAAGTTCTCTAAGTATACAGCAAAGGAGGATATTGAAAATGTATTATTCTCAATTATTGATGCTCAGTAATAGTTTTTCAGAGAATACACTTGATAATATGGATAAATACCTTTCAGGCTTGTCTCCCGCAGCTCAAAAGCTAATTACTATTTCAAAAGTGTCTGACGCTCTCCAACTTGATTATCAGACAACTTCAGAATCACCTAAAAAAGTGCTTGGATATAGGATTATTCAAGAAAAGATACGCATTAAAATGCCATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCACGGGGTGCGTGGATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //