Array 1 2082820-2083876 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065990.1 Veillonella parvula strain FDAARGOS_1046 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 2082820 35 100.0 36 ................................... ATTATATGAATATTATTACTAAATCAGAACATCAAA 2082891 35 100.0 38 ................................... TCTATAAATTAGTCACGACTATAATTATTAAAGTCGTG 2082964 35 100.0 36 ................................... ATTATATGAATATTATTACTAAATCAGAACATCAAA 2083035 35 100.0 38 ................................... TCTATAAATTAGTCACGACTATAATTATTAAAGTCGTG 2083108 35 100.0 38 ................................... ACCCATTCGCCTAGTGCTTTATGATAGTGACTTACAGG 2083181 35 100.0 38 ................................... TTGTATTGATGGCGGTGCACAATATTATCAAATGTTAA 2083254 35 100.0 38 ................................... CAATAAGATCAATATTATTAATATTATCAAGCTGGCTA 2083327 35 100.0 40 ................................... CTCCTTTATAAACATTATAATAAATAATCGTAACATACAA 2083402 35 100.0 37 ................................... TCTTCACCTTCTTCATGGAATTCGCCTTCATCATCAA 2083474 35 97.1 41 ...........A....................... TGTAAACCAATAGCTTTATTTTTATGGCCAAATGCTGCAGA 2083550 35 100.0 36 ................................... GCTTCATAAACTGCGATAACACACATAATAATTCTC 2083621 35 94.3 40 .......T...A....................... TTATCGGAGTTGAGCCAGCTTCACGCATCAATTAGTTTTT 2083696 35 100.0 36 ................................... CCCTAAAATTGATTTCTGACCGCTCGCAGTCGGACC 2083767 35 88.6 40 .......T...A.....T......A.......... GACATTTCGTTCAAGGTAACTTCTTGCTTCATTAAGTGCG 2083842 34 74.3 0 .......T...AT...T..-.....A.....T.CT | G [2083871] ========== ====== ====== ====== =================================== ========================================= ================== 15 35 97.0 38 GTTGCAACAGTGCTTACCGTTTACGGTATTGAAAC # Left flank : ACTTGGTATTAAAACGGCACTTGGTATGGGTGGTGTGAAGTGTGAAATTATAGAATAGTTTCCACTAGAAATATATGAATGTTAAAAAGTTAATATTCATATATTATTGGCTTTATCTGAATTTATAGATAGAGTTTTTTGTACAGTTTTACTTGTTTATCTGGGTATAGTAGATAGTATTTTAATTGTCTAAATATGGTATTAAATGAGAAGAATTGACATGGATATTATGGTATGGTCTTAGACTAAGGGTAATAAGGGTAGATGATTGATTATATTTTTCTTTAAACTCAAATGAAAAGAAAATGAACTTAATTGTTGACGTAAAATCTATAAACCCTTATAATAACTGTAATCTTAGAAAAATCATTTACCACTAGTATTTATCTATGCTCATCGACATTTTAGATGCAATGGGAGCACAATTTGACCGTTTACGGTGTGAGGTTTGCCAAAACCTATTTTTAAGCCACATGAATACTGGCTTTCTAAGACACGCT # Right flank : TACAGATGGTGAGGTAGAAGCGGGCACAGCGCAACGATGAAATCCTCTATATTGCAGTTATTTATACAGATTGAAGGTGTAAATAAAGGTGATAAGGGGTTGCACTATATTTTTATATCTAATAGAAAACGAGTGAATCTTTTGAATTCACTCGTTTTTTTTATGTCTTAGTTTTTTTGAATTTGGTTATATTAGCTTTCATCTTATACTAAAGACGTAGCCGATGAGCGGTGATAATCTTAATATGTTTAGGGGATCCTAGTTTTGCATCAGATTATTTGTAGCTTGTTGGGGATTGTAGAAAATATGTATAGCGTTAGGTATAGGAGGTAGTATATGAACATTAATTGGAATGGATTATTTTAATAATAGTATATTTAGTTGTAATGATAGGAGGGATGTTATGTCGCCTTTAGCAGTGGATTCTGCAGTAGCAGTGTTAGTAGCGGTGCTTGATGCACTTGAAGAGTAATTTTATTTATGTATGTTGATCGGTTAAA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACAGTGCTTACCGTTTACGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 2093583-2094217 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065990.1 Veillonella parvula strain FDAARGOS_1046 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================================================================================== ================== 2093583 28 89.3 43 TC....C..................... TGGTCTGAAGTGTTCTCCGTTCCTTGTCCATTCCCCTCGTTGA 2093654 28 96.4 22 ......C..................... TTTACTCCTTTCCCGAAGATTT TA [2093659] Deletion [2093704] 2093654 28 96.4 165 ......C..................... TTTACTCCTTTCCCGAAGATTTCACGAACTTCTACGAGTTGCAACAGTACTTACCGTTTACGGTATGCGCCGAAGGGTGCTAGACCGCAGAGGAGAAAAGCGACGATGAGGTTTGCACATCTCAAGTACCTGAACGAAGTGAAGGTAAAACAGAGGTGATGATGT TA [2093659] 2093850 28 96.4 43 ..T......................... TTTCGAGCAAAATTCCATTCAAATTGTCGCAATACCAAGTTGC 2093921 28 100.0 22 ............................ CCGCTGATAGCTTGTGTAGTCA TA [2093926] Deletion [2093971] 2093921 28 100.0 238 ............................ CCGCTGATAGCTTGTGTAGTCATATCAACGTTCTCTGGTTGCAACAGTATTTACCGTTTACGGTATTGAAACATGATGTTTACCATCATACATATCGGCATCTGTTCCAAGTTGCAAGAGTACTTACTGTTTATGGTATGCGCCGAAGGGTGCGAGACAGCAGAGGAGCAAAGCGACGATGAGGTCCGCACACCTCAAGTACCTGAACGAAGTGAAGGTAAAACAGAGGTGATGAGGT TA [2093926] 2094190 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ============================================================================================================================================================================================================================================== ================== 7 28 96.4 89 AACAGCTTACCGTTTACGGTATTGAAAC # Left flank : AGTAAAAGTAATGATGGAATTTAATTGTATATAGGCCTATTCGTATGATGTCATATGGGTAGGTCTTTTTTATATGTTGCAGATAGACTAAATCCTTTTCTAAGGTATTAAAATTAATTTAAAGCTTGGTAAACTTAGATAAGACCAGTATTTTAATAAAATAGAACAGAAAGAAAATGATAAAGAATATTGACGTAATATTCAGAAAACCTTATAATTACTGTAACCTTAGAAAAATCATTTACCACCAGTATTTACCTGTGCTCATCGGCATTTTTGATCAAATGAGAGCCTAATCTGACCGTTTACGGTGTGAGGTTTGCCAAAACCTATTTTTAAGGCCTATGAATACTGGCTTTCTGAGGCACGCTGTTGCAACAGCACTTACCGTTTACGGTATGCGCCGAAGGGTGCGAGACAGCAGAGGCGCAAAGCGACGATGAGGTCCGCACATCTCAAGTACCTGAACGAAGTGAAGGTAAAACGAAGGTGATAAGGGA # Right flank : CATAAACATAATCGGCTTGGTATGTCTTGAGCTTTTTGGTTGCAACAGTACTTACCTTTTAGGGTATGCGCAGAAGGGTGCGAGGCAACAGAGGAGCAAAGCGACGATGAGGTCCGCACATCTCAAGTACCTGAACGAAGTGAAGGTAAAACGAAGGTGACAAGGTAACAGCTTTTATCGTTTATGATTGTGTATTTTCATATTTAATGTAAAAGGGTGAATCTTTAGATTCACCCTTTTTTTGCATCTTAGTTTTTTTGAATATGGATTTGTCGATTTTCATTCTATAATTATTTTGTAACCTAGAGCGAAATACTTGAATTATAGAGATGATAGTTCGCCTTAGTTTTTATGAATTCAATTGTATCTTTGATAAGGTTATACTATGGATAGTTAATTTAGTCATATGAGTTGGGAGGTAATGAATGACTTGTAGAATTGGATATTTAAAATTGTAAATGTCAAAGGATTTATTTTGTTTATATGTATTTCAGGAGGAA # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:-3, 8:0.8, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACAGCTTACCGTTTACGGTATTGAAAC # Alternate repeat : AATAGCTTACCGTTTACGGTATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [5-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 3 2095573-2096428 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065990.1 Veillonella parvula strain FDAARGOS_1046 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================================================================================================================================== ================== 2095573 35 100.0 35 ................................... CTAGTTCTGCTTTCTTATTTTCAGCATCATGTAGA 2095643 35 100.0 43 ................................... TAGAAGGGGTTGAATATTCTACTATTGCCATGTCTGCAGCTTC 2095721 35 100.0 35 ................................... ATTATTGCTGTACTTCAAAATGACAATTACTTTGG 2095791 35 100.0 36 ................................... GCTAGAAATAATTCGAATCCGATTACAAATCCTAAA 2095862 35 100.0 41 ................................... TATTGGGAGTTTTGAATTTCTTTATGCATTTGCATAAAGAG 2095938 35 88.6 84 ........A..A.................C....G GGTGCGAGACAGCAGAGGAGCAAAGCGACGATGAGGTCCGCACATCTCAAGTACCTGAACGAAGTGAAGGTAAAACAAGGGTGA G,C,G [2095967,2095970,2095972] 2096060 35 74.3 37 TAA.GG.TTCA........................ ATTTATAACTATCGGCAATTTTAATTTTAGATGATTC 2096132 35 94.3 37 ........A..A....................... CCAAAGAACTTAATGAGTTTCAAAACATTAGCTCTAC 2096204 35 82.9 155 ........A..A..........G........C.GA AGGGTGCGAGACAGCAGAGGAGCAAAGCGACGATGAGGTCCACACATCTCAAGTGCCTGAACGAAGTGAAGGTAAAACGAGGGTGATAAGGGATTCAGCTTACCGTTTACGGTATTGAAACCCGGTCCATGTTCCGTGTGTGGTGAATTTCCAAG G [2096233] 2096395 34 82.9 0 ........A..G.................-.CGT. | ========== ====== ====== ====== =================================== =========================================================================================================================================================== ================== 10 35 92.3 56 GTTGCAACCGCTCTTACCGTTTACGGTATTGAAAC # Left flank : GTTGATGAAGCAGTAGATTTTGTACTAGACGAATTATTTGATTGAGTATAGGAGAGGTGTACATGTCAACTCTAATAGGATTATTATTGTTGTATATATTCGCTTGGTATCTTGAGGATTAATAGTAGAAATAATGATGGAATATAATTGTATATAGGCCTATTCATATGATGATGTATGGATAGGTCTTTTTATATGTAGTAGATAGACTAAATCCTTTTTTAGGTATTCAAATTAAGTTAAAAATTGTTAAACTTAGATACTATCTACATTTAATTAAAAATAAGCCATAAGTCAGAAAGAAAACGATAAAGAATATTGACGTAAAATCGAGAAACCCTTATAATTACTGTAACCTTAGAAAAATCATTTACCACCAGTATTTACTTATGCTTATCGGTATTTTTGATCCAGTGGGAGCCCAATCTGACCGTTTACGGTGTGAGGTTTGCCAAAACTTAATTTTAAGCCCCATGAATACTGGCTTTCTGAGGTATGCT # Right flank : CGAAGAATGGGAATATCTAACTTAAAAATTACATAATAATAAAGAACTGTGTTCTTGTGTATGTCACACAAAAATACAGTTCTTTTTTTGTTCCTAGTTTTTCTGATTAGTTCACTTTCAGTATGATTCGTATAATGAACTCAACAAGTTTAATTGGTCTTATATAGGAGGTAGTATATGGCAATGTTGTTTTTAACTTTATTGGTGTGGTTTGTATTACCATCACGGAATGATTATTAAGGAGGGTATTATGGAAAATTTACAGGAAGAATTAAAGTCTATGTTGTCCTTATCAGGGCGTATGAATCGTCGCTCTTATTTTATGAATTTGTTGATGATTATTGGTATTGGCTATCTTGGGGGTCTTTGTATTAGTCTTGCCCCTGTATCAAAGTTTTTCTGGGTATTGGGTTGGTCAATCATAGGGTATTCTGTTATTCGAGAGTTAGCTATTGCATCGCGTCGTATTCATGATTTAAATGGACCAACTTATTTAGCAG # Questionable array : NO Score: 7.00 # Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:0, 6:0.25, 7:-1.78, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACCGCTCTTACCGTTTACGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-33] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 4 2112922-2113550 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065990.1 Veillonella parvula strain FDAARGOS_1046 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 2112922 35 100.0 40 ................................... TAATTACTAATAGATTGTACAGAACGATTACTTTGAATAA 2112997 35 100.0 39 ................................... ATTCTTTCATAACAGATTGTACACTTTCACTGCTCTTCA 2113071 35 100.0 41 ................................... ATTCTTTTTTTGTCTGTTCATATTATTCTCCTCTCTTGACA 2113147 35 100.0 39 ................................... ATTGCATCGTTACGAACTTGATCCATTGCAATATTGTCG 2113221 35 100.0 39 ................................... TTTACCGCTGTCTTAGTGGTATCTTGTAAAGATTTTACA 2113295 35 100.0 37 ................................... GTGAAGTAGAAATCAATTCCAGTATTGAAATTGAAGA 2113367 35 100.0 40 ................................... ATAATACTTCCAAGGGCGACGATATTTTCTATCTGCACCT 2113442 35 100.0 38 ................................... GAGTAAGCTTCAAGCATACCACAAGTATCAGTGATTAG 2113515 35 77.1 0 .........A..A...A......TA.....T..TA | A [2113544] ========== ====== ====== ====== =================================== ========================================= ================== 9 35 97.5 39 GTTGCAACAGCACTTACCGTTTACGGTATTGAAAC # Left flank : GACTTATGACACCATAGAAGAATATAAAAAAGTATTAGATAAGTATCTATTTTATATGTATAAGTAGTGACTATATAGAAAAATTTATATACCTATTTTATAAAGACTTCCATACAAAATTTTATTTATAGATTGAGGTTATGAGCATAAAACATAACTATATAGTTATGATCTTTATGCCTTAAAGAATAAAAAGAACTCGCCTAATAAAACGTTAGGAGGGTTCTTTTATTTAAACTATATATTGAAAAAAATAACTATCAAAATTTTATTAATAGTATTTCCTTAGAATATATTGAAAAGAAAATGAATTAAATATTGACGCAAAATCTGAAAAATCTTATAATTACTGTAACCTTAGAAAAATCATTTACCACCAGTATTTACCTATGCTCATCGGCATTTTTAATCCCATGGGAGCTCAATCTGACCGTTTACGGTGTGAGGTTTGCCAAAACCTATTTTTAAGCCCCATGAATACTGGACTACTGAGGCCTGCT # Right flank : AGAACCATTATTTTTAGTTTGATATATTGATAGAGTTATCTCACTAATGCCAATGGTTCTATTTCTTTTGTTTATGGTATAATATAGCTAGATTTAAAACTCGGAAAACCAAATCTGCGCCGTTATGATAGTGGTGCGGTTAAAAGACATTATTTTAGCTTGCTAAAGTGCCTTTTAAAATCAATTTGCAATCTCCGCCGTTTTTTGCATTTTGGAACCAGTAAATATCTGTTGTTTCAGAGACAGGGTTAAATTAAATAATCCCTTGATGGGGACGGAAACTTATTTACTCATCTTTTTTAATAAGAGTTGCAATACTTGGTTTGTTAAATTAAATAATCCCCTGATGGGGACGGAAACTTTAATAGCATTCAATCTAGGAGTATTATAAGTTAGTTAAATTAAATAATCCCCTGATGGGGACGGAAACTTGCTGAAATATATGGAATAAGTTCCTTCTTGATCTTTACAATGTTAAATTAAATAATCCCCTGATGGGG # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACAGCACTTACCGTTTACGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 5 2114134-2113797 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065990.1 Veillonella parvula strain FDAARGOS_1046 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 2114133 35 77.1 41 AAAA...G.....AAT................... TAGAATTAGATGAAGTATCTGTAGCTGATAGCACTAGACTG 2114057 35 100.0 43 ................................... ATTGTAAAGATCAAGAAGGAACTTATTCCATATATTTCAGCAA 2113979 35 100.0 35 ................................... TAACTTATAATACTCCTAGATTGAATGCTATTAAA 2113909 35 100.0 43 ................................... AAACCAAGTATTGCAACTCTTATTAAAAAAGATGAGTAAATAA 2113831 35 97.1 0 ................A.................. | ========== ====== ====== ====== =================================== =========================================== ================== 5 35 94.8 41 GTTTCCGTCCCCATCAGGGGATTATTTAATTTAAC # Left flank : TGAAGCGGTAACTCTTTATCAAACTTCTGTGTAGAGGTATTTTCACCTTCCTCAAGATCTCGACGATTTACAGCTGCAGCAATATTATCTGCTTCGTACACAATGTATGCATAATCATCATTTTTTAGTTGAGCTGTACTAAGCTCTTTCCCGTGATGATACTTCAAACAATGAGTAATACTTTGCTTTAAGCCCATATCGGAAAAATAGGGTTCAATGAAAGCAGCGCCGCGCTTAGAATGTGCATCGGTTCCCTGATTAGCTCGATACACGACTTTGCCGATATCATGAAGCAATGCACCCTTTACCAGTGCATCCCATTTACCCATTACATCGCCTCCAAACTCTACTTAAGAAATAAAAAACCTATTGACTTCATTATATATTCATTTCTGTTTAAAACCAATAGAAAAACCATCCGATTTATACAAAAAAGCCAGTATATTCACTAAAAAGAATATACTGGCTATATTTTTATACTTATATGAGTTTTTAACATA # Right flank : CCTGTCTCTGAAACAACAGATATTTACTGGTTCCAAAATGCAAAAAACGGCGGAGATTGCAAATTGATTTTAAAAGGCACTTTAGCAAGCTAAAATAATGTCTTTTAACCGCACCACTATCATAACGGCGCAGATTTGGTTTTCCGAGTTTTAAATCTAGCTATATTATACCATAAACAAAAGAAATAGAACCATTGGCATTAGTGAGATAACTCTATCAATATATCAAACTAAAAATAATGGTTCTATTAATATACTATAAACGTTAATTGTTGTTGCAACCTAATCACTGATACTTGTGGTATGCTTGAAGCTTACTCGTTTCAATACCGTAAACGGTAAGTGCTGTTGCAACAGGTGCAGATAGAAAATATCGTCGCCCTTGGAAGTATTATGTTTCAATACCGTAAACGGTAAGTGCTGTTGCAACTCTTCAATTTCAATACTGGAATTGATTTCTACTTCACGTTTCAATACCGTAAACGGTAAGTGCTGTTGCA # Questionable array : NO Score: 2.80 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGTCCCCATCAGGGGATTATTTAATTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.90,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //