Array 1 102262-105917 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJFF01000006.1 Bifidobacterium moukalabense strain GB65 contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 102262 33 100.0 34 ................................. CTAGTTCGTTTGCGATGATCGGATACGGGATTTG 102329 33 100.0 35 ................................. CAAATATCGGGTGTCGATGGTGGCGGGAAGCCCAA 102397 33 100.0 35 ................................. GAGGATGAGGCTGTCCTTGACGATGGAGACGGCAC 102465 33 100.0 34 ................................. GACATCGATATCGATAATGGAGATGAGTGACATG 102532 33 100.0 34 ................................. TCACCTGCCGCGAACGGGACGAACAGGTGGTCTC 102599 33 100.0 34 ................................. ACCTTTGCGCCCAAAAATCGGCACATATCGGGCG 102666 33 100.0 34 ................................. AGGTCGAGGAAACCGTTGTAACCGTTCAGCCATC 102733 33 100.0 33 ................................. TCAGGATGGGAGAGGCTAATGGTGAAGGTCCTG 102799 33 100.0 33 ................................. TGAGGAGAGAACGGCACATGAATCAAGCTGAGT 102865 33 100.0 34 ................................. TCGAGGCCATCGCCAACCATGCCGATCTGCTGAT 102932 33 100.0 34 ................................. ACGAACGCTTCGCCGATGCTCTTGGCGACGATGG 102999 33 100.0 35 ................................. TACACCAACGACAAGGTGCAGGAACTGTCTCGGAG 103067 33 100.0 35 ................................. TTGGTCTTTGATGGTTTTGCATTGGTTGCAGAGGG 103135 33 100.0 35 ................................. AAAATCAACCGGCCTATCACCCACCGCTTGCAGTA 103203 33 100.0 35 ................................. TTGCTATCCTCGTATTTGCCGCGCGTCGGATTATA 103271 33 100.0 34 ................................. GTAATCAGATGGCGGAAATGCAAATACGCAAGGA 103338 33 100.0 35 ................................. TGAAAATGGCACGGCCAAAGGGCGTAAATTGGTTT 103406 33 100.0 34 ................................. GCGGACTTGGTGAGATGCCCATCGCTGAATCGAT 103473 33 100.0 35 ................................. GTTTTTCGCGGATGACGCTGACTGGGTAGACTTGG 103541 33 100.0 34 ................................. ATGTATGGCACGATGTACGGAGCAGGACTTGCAA 103608 33 100.0 33 ................................. AAGCCCTCTGCGACGTGGAAATGCTCGAGGAAG 103674 33 100.0 35 ................................. CCTCTCTTGGTTCTCTCCCTACCGTAGGTTCGACT 103742 33 100.0 33 ................................. CGATCTATACCGTCGCATCGCGCATCGCGCCAA 103808 33 100.0 34 ................................. GCTTGTGAACCAGCCTTTGCAAACCGGACAACGG 103875 33 100.0 33 ................................. GTTCAAATGGTCGGCAACGACCTTGTTGGCGAG 103941 33 100.0 35 ................................. GCTCAGGGTGGGTGGCTCGTGATGGCTGACCCGTG 104009 33 100.0 33 ................................. ACCTTGCACGTGGTCATATTGCCACCACTTGGA 104075 33 100.0 33 ................................. GATATGATACATACCTTGCGGACGACTCAAACC 104141 33 100.0 32 ................................. TATGGAACATGAGGCGATAATCAGCCCGGAAA 104206 33 100.0 34 ................................. ATCGTGACTTGGCTGGACTTGCTGAGCATTCCAC 104273 33 100.0 34 ................................. TTCCATGCGCTGCCGCGATGCGGTTTGCTCATGG 104340 33 100.0 34 ................................. CTGACCGTCAACGACGTGAGGGGAAAGATCAGGA 104407 33 100.0 34 ................................. CTGAACGTACCCGGCCGCCTGCGCGGCCTCGGCC 104474 33 100.0 35 ................................. TGCATGATTGGGGTATTTATGCGTTGAATCCTTAT 104542 33 100.0 34 ................................. CGGTAAAGGCGCGGGTAAATGGTTAAGTCTGCAA 104609 33 100.0 35 ................................. TTGAGACTGCCCGCTACCGCGATAGCTTGCGGCGC 104677 33 100.0 33 ................................. CAAGCCGTGCGCTAAGCGCATGTGAAAACCCCT 104743 33 100.0 34 ................................. TCCAGCTTGATGTGTGTCTTCTGCTCATTCGGGA 104810 33 100.0 34 ................................. AAAAAGTATGCCACCACCGCCTCACAGACGGATA 104877 33 100.0 34 ................................. AAACTCGGCCGATTCGATGAAGCCAAGGGTGATC 104944 33 100.0 34 ................................. CTTAATATGATCTACGCCCCGGTATATCCTGACC 105011 33 100.0 34 ................................. ACGTATCAGGCTACCGTACCAATACGGCACCGCA 105078 33 100.0 34 ................................. CGTATCGAGAGGAGACGTTATGTTTAATCGGGGC 105145 33 100.0 35 ................................. TGACCCTGTGTGTTGTGGCGGCCCATCATGCGTAG 105213 33 100.0 35 ................................. CTGCTCACGCCGGTACTGCTGCTCGCGCTCGCCGG 105281 33 100.0 35 ................................. GGTGTGAGGCGTGTATTCGCGGCCATGCCAGGTGA 105349 33 100.0 34 ................................. GTCGTACAGGAGAAGGAACCTCCATATGATTGGA 105416 33 100.0 34 ................................. TTCGAGATGGTGGCGCGTGATGAGAAAGACATCA 105483 33 100.0 35 ................................. AACCCGGCCCGGAATTGGGAAAGAGACGCATACGA 105551 33 100.0 34 ................................. CTTTTCGAGAATGTAGATAATCGTTGACGATATG 105618 33 100.0 35 ................................. GCTTCCGGCATCGGACGCCGTGGCCTTCAACCCGC 105686 33 100.0 33 ................................. TGTCACCATACGAACGCCCCAACCACTTGCAGA 105752 33 100.0 33 ................................. GAATGCCAACGCGACGAACTCACCACGAGTGAC 105818 33 100.0 34 ................................. CAACACGTATGCGACCAAAACCGATGTCAGCAAG 105885 33 81.8 0 ..................T.T.GA...CT.... | ========== ====== ====== ====== ================================= =================================== ================== 55 33 99.7 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : CTGCGGGAAAGAGACGATTGCGTAACGTTGCGAAGACTTGTATGAAGTACGGGCAGCGAGTGCAGAATAGTGTGTTCGAGTGCTCGGTCACTCCAGCAGATTATCTAACTCTAATAAATGAAGTGATGAAAATCATGGATCAAGAGAAGGATAGCCTACGCTTATATAAATTAGGAACGAAATATTCTGAGAAGATTGAATATTATGGTGTGCAACGGCATCTTCCTGTGGACGATGTAATGATGATCTAGGCACCGAAGTCCGCCGTTGTGCGAAGTGGAAGCTCTCATCGGATAAGGCGAGCTTCGCACTTGGATAGAACTTGGAATCGAAAAGTAAGTCGACTTTCCTTTGCTGTTTGATAATTTCAGAGAGAAGAATCGTTATTATTTTTTGGTCGAGTGATTAGAATAACAGGTTTTGACCTCAAACCCTGCTACTCTTGGACTCGTACGAAGGATAGATGTTCCACAATGTGAAACATGCTGTCCATCTGTGCA # Right flank : TGACGGGGGCGGTCATGGGATTGCGTGAGCAGCGTGAACGATGCGGGTTGACGTTGTTCCAGTTGGATGCGTTGACCGGTATCGCCTATACGCGGCTGAGTACGTTGGAGTGTAATCCGTCTGAGGCGCGGAACATGTATTTGTGTACGGCTCGGCGGATTGCCGACGTGTTGCATTGCAACGTGTTGGACTTGTATCCGGATGAGGATGCTTGGCGTGGTGGCGTGTCGGCTGGCGTGACCGGGTTGAGGAGGATTCGTAGGGAACGGCATTTGACGCAACGGATGCTGTCGTCTTTGACGGGTATTCCTCAGCCTAATATTTCTTGGTTTGAGACTGGGTATCGTCCCGTGTCTCAGATGTATTTGGATACTGCGCGTCGCCTGTCGGAGGCGTTGCAGTGTGACCCTGTTGATTTTCTAATTGATTGAAAGGATTTTGTGATGAAGGCTGAGGTTGTTATTGTTTCGCGGTTGGCGCGTCATGGCGGGACGATGCTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //