Array 1 2483-2035 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWQ01000209.1 Vibrio sp. V40_P2S30T141 scaffold303_size2513, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2482 28 100.0 32 ............................ CAACCACTAATCATTGATTATGATTACGCTTT 2422 28 100.0 32 ............................ GACTTAGAGTGGTAAAGAGCATAAAGCAAGTA 2362 28 100.0 32 ............................ ATTATAAAGGCAATACGGTTGTTTTAAGACCT 2302 28 100.0 32 ............................ CCAAGGCTCGCTGGGTATTCCTAACGCTGACT 2242 28 100.0 32 ............................ AGCACGCCAGTTGAAACCACACTCACCCAATG 2182 28 100.0 32 ............................ TTATTTAAAGTATTCGTCTGCCGCTGGTGCGC 2122 28 100.0 32 ............................ GCATTGTTTGAAAACCGTCACCGCGTGGTCAG 2062 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATTAACAATAGGTTACTGATAAAGTTTCAT # Right flank : TATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGTTTTTTCAGGAAAATTATGATCAGAGAAATTACGAAGTCAGATTTTGAATCATTCTGGCCAACATTTTTAGATGTAATCCAAGCTCAAGAAACTTACGCTTTTGAGCCTACAATGACTTTAGAACAAGCTTATTCAATTTGGTGTGAATTGCCTTTAAAAACGTTTGTTTTCATTGAAAATAATGTAGTTCTCGGAACTTACTACATCAAGCCAAATGCAACAGGACCGAGTAGTCATATATGCAATTGTGGTTATATGGTATCGAATAAAGCAAGAGGTAAAGGTGTTGCTCGTAAAATGTGCGAGCATTCTCAGAAAATTGCAGTGGAGCTTGGTTTTGAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 25593-25445 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWQ01000137.1 Vibrio sp. V40_P2S30T141 scaffold26_size25624, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 25592 28 100.0 32 ............................ GATAAAAAGCATGTTTGACTTCGGTGTTTCAG 25532 28 100.0 32 ............................ AACTATAGTTGCTGCGTTAGCCATATATCCCT 25472 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================ ================== 3 28 98.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGATGCGCAGATTTATCCAATCAACGAGGTG # Right flank : TTGCAGTTGATTGGGCTTGGTTGGATCAATAAAAACAAACTTTTATTGTATTGAAAGCCGTCATTGACTGAACCCAAAAATCAGGCAAAATGTTTACAAGATGCACAACCTCGCCCACTCGGCGGGGTTTTTTTATGCCTGTCATTTGGGGGTGACAATGTCACTAGATAAAGCCACGATTGCTATCGCCACTGGCACTGGAACGACGGTCGGAGTCAGTGCCGCTAAATCTGCGCAAAGTGCGCAATCTTTGTTAAATTCCAGTATTTCACAGATATTAGCGGGTGATTACACACTCTACGGCTCTGATATCGCTACGATAGCCGGTATCGTTATGGGCGCTCTCGGTATTGTGGTTACGCTCTATCGTATCCGCGTCACTAAGCGACTCGCCAATGCGTTATAACAAGCTGACTACGGCGTTAATCGGAGCTGCTATCGGTATAACGGGCGGTTTTGAGGGTTACAACCGCATCGCATACCAAGATAGCGGGGGAGTG # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 15700-15251 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWQ01000235.1 Vibrio sp. V40_P2S30T141 scaffold54_size18031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 15699 28 100.0 32 ............................ TTCCACTCTCACTGATACAAGCTCGGCTTGTT 15639 28 100.0 32 ............................ GCTCTATCTAGCACTTTATGACCATGAAACAC 15579 28 100.0 32 ............................ GATCAGTCGAAAATCAGCGTCAAGCCGCAGTT 15519 28 100.0 32 ............................ GTTCATTTTTCTAGCGAGCGACATTATTAACT 15459 28 100.0 33 ............................ TCACTACTCCTCCTTGAGGAAGTAACGTTACAT 15398 28 100.0 32 ............................ TTCTTGGCAGGGTAACCCAGTGCGTCAATTCG 15338 28 100.0 32 ............................ TATTAAGTTAGCAATCAAGCTGTTAATCGGGC 15278 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCAAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAGGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGCTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACGAAGCAGGTACATCGTAAATTCTTTGAGTTTGGTGAAATACAGCCACTGCCAGTATCCGGAAAGTTTGACTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTGCTCTTTAAAAATAACCTTTAAATACAAATAGTTACAGCATGTGATTTAAAATAGGGTAAAAATGGCTTTTTTACTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : AACCATTACACGCTCACCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACCGATGCCAAGTGCTTAAGTGAGCGATCAATGGTCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTTGTGTGGTTTTGGGATATGATCTCCATAGATCCCCGTCATATTTTGCCTGCTACTGTTGTGAGGCAGGGAAATGAAGGTGTAGCGATCATCGAAAACTGATCCACTAAATACAATTAGTCAGCATAGACTCCCACCTTGACGGCAATGATGCTTGACGCTTTGAATATTCGATTATTCACCGTGATTACAAGAAAACGTGAGTTTCTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATGAATTGCATTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //