Array 1 4791-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMU010000031.1 Myxococcus sp. CA033 NODE_31_length_143900_cov_19.9536, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 4790 37 100.0 35 ..................................... TGCCTACACGTCACCACAGGCCCGCCCCGTTCGAA 4718 37 100.0 32 ..................................... GGGTCGCGACCGCTGACGCGGGCATGGTGGAG 4649 37 100.0 34 ..................................... CGACATCGAGAAGGACAGCGACACCTTCGCGCAG 4578 37 100.0 35 ..................................... GCAGGTCCTGCCTGGTGCTCTACCGGTACAGCCAG 4506 37 100.0 34 ..................................... CGTCCTGGCGGCCAGTCGTGAGTGAGCGGATGTT 4435 37 100.0 32 ..................................... GAACGGGGTGGAACCATGGCTAGCACGGGCAA 4366 37 100.0 33 ..................................... CACACCGGCATTGGGACGGGCGTGGGCACGGGC 4296 37 100.0 33 ..................................... ACCATCTCCGACACCCAGTGCCTCTTGTGGAGC 4226 37 100.0 37 ..................................... CGACGGCAACCACGGGGTTGGCGACTTCGGCCTCTGT 4152 37 100.0 36 ..................................... GACTGCTCCGGCCTCGTCACGTGGGCCTACCTGAAG 4079 37 100.0 34 ..................................... ATCGACTCGGTGGCTGGCCCGCTGACGATGTCGC 4008 37 100.0 33 ..................................... GCGATTCGGTCAACTGCCTGGGGGCTCAGAATC 3938 37 100.0 31 ..................................... CCGGGCAGCGTCATGTACTCCATGACGAACG 3870 37 100.0 35 ..................................... CTGCGCGGCGCATTGAGGCGTCAGCCGTGCGATGT 3798 37 100.0 34 ..................................... CAGTGCTTCTTGTTGAAGAAATCGAACGCACGGA 3727 37 100.0 32 ..................................... CGCTCCGAGGACCTGTTCAACCACCTCGCCAC 3658 37 100.0 31 ..................................... GCGAGCTTGACGGCGATGCTCGGAGGCCTCG 3590 37 100.0 35 ..................................... TCCCGAACAGGCTTACTGTCCACGCGTCACTGGGG 3518 37 100.0 35 ..................................... GATTACCGGGGTGAACCCTCCCGAGATTCCCCCCA 3446 37 100.0 36 ..................................... TCGTGACGCCCGTACCGGTTGAGGGCTTCGGCCAAG 3373 37 100.0 31 ..................................... GTCGCGTACCGCAGCGCACTCCGCCCCTGGC 3305 37 100.0 35 ..................................... TGGGGTCGTCTTGCGGAGGCTCATGCCCCGTAGTC 3233 37 100.0 35 ..................................... CGGTAGCGCCGCACGAGGTGGTGCGTCACGGCGCA 3161 37 100.0 34 ..................................... TCCGCGATGGCGCCCTCGACGTCGGACGTCACGA 3090 37 100.0 34 ..................................... ACACCAGTGACTCTCCGGACCAACCTCGGGGTGC 3019 37 100.0 35 ..................................... CCACGTTAGCGCTTGGCGGGGCACACCCTTACAAG 2947 37 100.0 33 ..................................... TACAACGAGATTGACCTCGTCTCGACGCGCATC 2877 37 100.0 32 ..................................... ACGACGCTGACGCGCCCTCCCGTCTCGCGGAT 2808 37 100.0 33 ..................................... ACGCGGCCATCCGCGTCAGCGGCGGGGAGAGTG 2738 37 100.0 34 ..................................... CTGGGGTTGCGGGTCTTCTCCCCCCGGCCATACC 2667 37 100.0 35 ..................................... TCCCGTGTCCAGGAGGGTGTCATTGTTCGCGGCCA 2595 37 100.0 34 ..................................... ACGAGCCGTGTCGACCTCCGGAAGATGCTGCCGG 2524 37 100.0 34 ..................................... GTTTCGGGCGTCCACACGCTCTCCAGCGCGCGGT 2453 37 100.0 36 ..................................... CCCCAAGGGCCCACGTGGTGGCGTGAACCCCTGGAG 2380 37 100.0 35 ..................................... GTTCCCGCAGAACCGCACCGCGCCGCGCCTGTCCA 2308 37 100.0 32 ..................................... CCTTGAGTCTGGCTCACCGCACCCTCCCTCTC 2239 37 100.0 32 ..................................... TGTCGTTGCTTTATTCGCGTTACATCATCCGC 2170 37 97.3 34 ..........................C.......... TCGAATGCGGCGACTTCACACTTGAGGTCGGGCA 2099 37 100.0 33 ..................................... CATTTCATCAGACCGCGACCTGACCGCACGAAG 2029 37 100.0 34 ..................................... ATGGAAGGGCTCGGCTACCGCTTGACCATCAACA 1958 37 100.0 37 ..................................... CCACATCTGTATCGAGGGGTGGAATGCGGCGACAGGG 1884 37 100.0 34 ..................................... TTCGCTGCTACCGCATGTCCAGAGGGCTTACGCT 1813 37 100.0 34 ..................................... AGCAGTGACGGCGGCGGAGGGGAAGGCCGGTCCC 1742 37 100.0 34 ..................................... ACGAGCACGTCGACGTAGACGGTCATCGCGTCAC 1671 37 100.0 35 ..................................... GTTGACTGGCGGGGCGTCACGACGACGGGCCAGCG 1599 37 100.0 33 ..................................... ATGTCCCGTTGGCGGAGGACTTGGATAAGCACA 1529 37 97.3 33 .........T........................... ATCCTGGCTGAACACGGCGGCCTGAGCCAACGT 1459 37 100.0 33 ..................................... ATCAGCACAGGAGACAACACAATGGCCGCTGCA 1389 37 100.0 35 ..................................... AGGTGGAGCTTTATCCGAGCGGCTGCCGTGAGGTA 1317 37 100.0 33 ..................................... GCGACTCAGTGGGGAGACCTCGGACCGGTGTAC 1247 37 100.0 33 ..................................... TGGTTCGTCGGGTCGTTCCACGTCACCAACGCG 1177 37 100.0 32 ..................................... GAGGGACGGGAGCGCAGGCCCTGGCAGAACTG 1108 37 100.0 33 ..................................... TCGTGGTTGGTGATGATGCCGCCGAAGACGGCG 1038 37 100.0 33 ..................................... ATGACATCAGGATGGGCGACGTTGACCAGCGCA 968 37 100.0 33 ..................................... TTGCGCTCCTTGGCCTCCAGCGCCTTGGCATCC 898 37 100.0 34 ..................................... TCCGATTGGTGTTGAATTGATGCTAGCTCTCGTT 827 37 100.0 33 ..................................... CTCTTCTGGGCGCACGGCATCAAGTGGGAGTTG 757 37 100.0 34 ..................................... TCCAACCTCCTGCTCACCAACCCGGAGGCGTCGG 686 37 100.0 35 ..................................... CGGAGCTGCCCCAGCACGAGCCGCACGGCGTTGTC 614 37 100.0 36 ..................................... GCTCATACGATGCCGTCCGCCTACTTCGTGAAGGAG 541 37 100.0 33 ..................................... AGGTAGAACGTGTTCGCGTCGATAGAGATCGAT 471 37 100.0 33 ..................................... ACGGCGTCGCTTGAGCAGGTACAAGTCGTCGAA 401 37 100.0 32 ..................................... GTTGAGATGAAACTCAGGATTGACTTCCTGGA 332 37 100.0 34 ..................................... ACCGCTGGGGCGCTGGCGTTGCTGGGCGGTGGCT 261 37 100.0 34 ..................................... GTGTCGTGGCGCTGCTGGCGGCCGTCAATGGTGG 190 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ===================================== ================== 66 37 99.9 34 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : AGAAAGGTCACCGTGCTCGTGTGTTACGACGTCCGGGTCTCCGACGCGGAGGGGCCACGGCGGCTCCGGCGGATTGCTCGGGCGTGCAAGGACCATGGCGTCCGGGTGCAGTATTCGGTCTTCGAGTGCGTGCTGGAGCCGAAGGATTGGGTGGTCCTGCGCGCACGGCTGCTCGCGGAGCTGGATGATGCGAGCGACAGCCTGCGGTTCTATTTCCTGAGCGAAGATGTCGCTCGGAAGACGGAGCATCATGGCGCGAGGGTGCCGTTGGATGTGGAGGGGCCGCTCATCCTGTGAGGGGCTCGCGTGCCCTGAGTGGGGCGCGCGGACCTGTGCTGGTGTGGGCTCCGTCGGAGGTTCGCGTTCTTTGAAAGCTCCAATAGTCTTCAGAGGTTGCGCGGGCTGCGGAGCCGCCGACTCGGGCTGGGTGACTCGAGTGGAGCCAGGTTCGCGCGAAGCGGCTGGATTCCCTTGGAGTTCTGGTAGCTTGGACGGGCAGA # Right flank : ACATCAGCTCCGCCGCCTCCGCCGCTCTGCGTATTCCGGTCATGGTGAGCACTCGTTCCGGCTCAAGCCGAGCAGCGATTCCGGCTGGTGGCGAGCGGTCGGAGCGTCAGCGACGCTGGGTGGTTCATCCCTTGGCCTGCTTCCGACCCTTCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1105365-1103933 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMU010000002.1 Myxococcus sp. CA033 NODE_2_length_1105614_cov_18.4591, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1105364 37 97.3 33 .C................................... AGTCGCCCACCGTGACCATCCCCATCCACCTTG 1105294 37 100.0 34 ..................................... GAGAGGGTGGACAGCGACGGCACCGTTGCGCCTC 1105223 37 89.2 32 ....T............T........CT......... CACGTGAGGTTGCGACTCCCGAAGATGAGGAC 1105154 37 100.0 32 ..................................... TGCAGCGCGATGGTGTCGGAGTCCGGGCTGAT 1105085 37 100.0 33 ..................................... AGGTTTCCGGCAGCGCCATCCCCGGCGTACTCG 1105015 37 100.0 34 ..................................... AACACCACCAGCCTCGACTACTCGCTGGAGCCCA 1104944 37 100.0 31 ..................................... TTGGTAGCACGTGCGCGACTTTAGCGGAGTC 1104876 37 94.6 35 ........AT........................... GCGTTACGGGGTCGGCGCGCACGCTCCGCTCCATG 1104804 37 100.0 32 ..................................... CAGACGCGGCCAGCAACCGTGGCTTGAGTCTC 1104735 37 100.0 34 ..................................... ATGGAGCTGCCGGACGCGCTGCGCGAGCGCCGCG 1104664 37 94.6 33 .........................A.........G. CCAGGGCCATGATGATGTGTCGTGGCTGGAGGG 1104593 37 97.3 33 ...............T..................... GGAGCGGGCTCCTCGACGAGCAGGAGGTCAGTG 1104523 37 94.6 34 ..........C...T...................... GTGCTGGTGGTGGACGTCAACCGCAGCGTCACCA 1104452 37 100.0 32 ..................................... GAGGGCACGGTGATTCCGCCCCTGCCGCCAGA 1104383 37 100.0 36 ..................................... CCAACTGGCGCACTGCATTCCTCACAGCGCCCTGTC 1104310 37 100.0 33 ..................................... AGGTCGTGCTGAAGTACACCGCGCAGATTGGCG 1104240 37 97.3 33 ...............T..................... AGCGTCGCGTGGTTTCCGCTGCAAGAGCCCGAT 1104170 37 94.6 34 .......................A..G.......... CCGATGACGGGGATTGCCTCGCGCTTGAGCCACT 1104099 37 97.3 33 ....................A................ CGCTTTGCATTCCCTGCGGAGTCCCTGTCGTTA 1104029 37 91.9 23 ...............T...........C.T....... GAGGATGCTCGCGACTGGTTCCG Deletion [1103970] 1103969 37 75.7 0 T......T......T.T.CT......C..A....G.. | ========== ====== ====== ====== ===================================== ==================================== ================== 21 37 96.4 33 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : CGAACCGCAATCGCAACACCTCTCTCAACTTGCGCACCGCCAGCCTCTCTTGGGCCATCTCCACCTCCTCGAAGGAGATGGAGGCGAGACCCTGCTGCCCAGTGCCGTCAACGCTCCGTGTTCCGCCCCTGCCTGTGCTCACCATGCCCGGAACGGGTGCTCACCATGCCCGGAACGGGTGCTCACCTCGGTCCGGAATCGGTGCTCACCATGGTCCGGAATCGGTGCTCACCATGACCCGGTACACGC # Right flank : GCCTGCTCCGCTGGACGGAGCGGGCTTTGGATTTCGTCGATGTCCGCATCCGGAGGTAGATGACCCCGGACCTTCCTGTGCCGCAGCCCTGGAGCCAGAGAGCCACTTCTGAATGGTAGACTCTCGCAGTCGGTTCGGATGAAGGAGCCCAGGTGCAGCGACATGCGAGAAGGATGTTGATGTCCCTGCTGATGGGCTTCAGCGTCCTCGGCGTCGTGCGAATACCGACCGCACATGCGGAGCCTCCCATGACAAAGGCCCCTGCATGCATCAAGCGTGGATGGCCCGCGTCCGTCATGTGCGGAGGCACGGCGTGCTTCGTTTCGAGCTGCGGCGAAGGAAGATGCCCCTACTGCTTCATCGAGGGCATGGAGAATCTCGCGATCAAGGGATGGGCCGTCTACACATGCTTGAGTGGTGAGTCCGTTACAGGCAAGGCGCTCCTGTTCCAGACGCTACCCTTCGACGCCCGACTGGGGCCCTTCTGTGGGTGAGCCTTC # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 4101-6937 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMU010000036.1 Myxococcus sp. CA033 NODE_36_length_97608_cov_19.58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================================================== ================== 4101 36 97.2 37 ..............T..................... CTCCGCCGGCCAAGCCGGTGCCGAGCAACACCGCTGC 4174 36 97.2 35 ..............................G..... TTGAACCTCGACCCGGGTGACACAGCCTACGACGA 4245 36 97.2 38 .........A.......................... GCGGCCTACGGCGAGGTGAGGTGCAGCGCCTGCAAGGA 4319 36 94.4 31 .................A..............T... ATTGCGCGGGCGTCGTCACGGTTTCCTGCCT 4386 36 97.2 37 ......................G............. GCTACGAGGTGGACGGTTGCCTCTATGACGTCCTCTC 4459 36 100.0 38 .................................... CTGGTGACGGACCTGGCGCGGCAGGCCGAGGACGAGGG 4533 36 100.0 36 .................................... ACCTCGCGGATTGGAGCCGTGCCAACTCTGGTGCAG 4605 36 97.2 38 .......G............................ AAGGACCACACCGGCCGCGAGTTCCACGGGGTGAAGTC 4679 36 100.0 35 .................................... TTCGCCAACTTCAAGGAAATCTACGGGGACAAGTT 4750 36 100.0 33 .................................... CCCATACCTCGTGCATTACCTGGCCGAGGCGGT 4819 36 97.2 35 .................................T.. CAACTCCGGCTGGGAGAGGCAGGCATCCAGGCGGT 4890 36 94.4 40 ............A...................T... CGGCCACAATCGGGCAGGCGGCGCAGTCGATCACCTCCAG 4966 36 88.9 38 .................A.....T........T..A CTCGTGCTCGAAACCACCGTGCAGATCGCGTTCGACGG 5040 36 94.4 37 ..........G.G....................... GGTTCACTCCGGACAACATGATGGCCCGGAAGTACGA 5113 36 91.7 38 .............C..............C...T... ATCAACGCCCTGAAGTCCAGTCAGGACTATCAGGCAAA 5187 36 91.7 34 ..A.........................C....T.. TCTTGGAGCGCGCGAAAGAGATGGGCAACCCAGC 5257 36 94.4 38 .......G........A................... GCGGACGCCGGCACGGTCATCACGGGGGAGATCGGTAC 5331 36 100.0 37 .................................... TTCCGGTTGAGCCACTGCCGCGTGACGGAGACCCGTG 5404 36 100.0 34 .................................... CTGGGTGGGTGATGGCTCCTCGCAAAAAGAATTA 5474 36 100.0 35 .................................... CCGTCCCGCATGGCAGAGTGCTCGTGCGGTCTGCA 5545 36 97.2 39 ................................T... GAATCGCCATCCGGAGAAGCTGTGGTCATTTGACCGTTC 5620 36 88.9 34 .................C.G...........GT... ATCAGGCGAACGTGTTCAACATCCCCTTCAAGTA 5690 36 94.4 34 ............................CA...... CACGTATGTTCTTGCTGATAGCGGTGCGAGATGC 5760 36 94.4 38 ..............................T.T... GTGGGCCTCGTCCTCCTCAGTGGCTACGGCGGCTGCCG 5834 36 97.2 36 ................................T... GGTCATCAGCGGGCACAGTCATACGCCGGGAATCTG 5906 36 94.4 38 ..............................T.T... AAAGTGAATGACGAACTGCTCCCGAATTGCGGCATGAC 5980 36 83.3 38 .......................T.A.....TTGA. CCCCTGAGGAACATGCGCGCCATCCAGTGCCACCGAGC 6054 36 94.4 36 A...............................T... CGCCCAACGGCGACGTCGTCGTGCCGGGCTATACTT 6126 36 97.2 38 ................................T... GGCGCTGGAAACGAGGAGGCGGAGCTGCGCAAACAGTA 6200 36 91.7 36 A...........C..............A........ GAACAGAGAGGCCCGAGTGAGGCGCCCAGCGGTGCG 6272 36 91.7 33 ..........T.......T.............T... CATCAAGAACGCTGGCGCGAAGATCCGCAAGTA 6341 36 94.4 38 .................A..............T... GTCGCGGTCCACGCCGCTTGCGGCAATACCGACGCTAC 6415 36 97.2 35 ................................T... GGCGCGGACCAAGAGGACAAGAAATTCCAAGAGAC 6486 36 94.4 33 ..C.............................T... CCCCACCACCAACCAGCCCCAGGACAGGTGACA 6555 36 94.4 41 .............................A..T... CAGACGTTCCTCTGCGGGTTTTCACGCTCGCGCTTCGCGAG 6632 36 91.7 37 ..T.....................A.T......... GGATCCTCACCTGGCTGGGGACGGACCGAGACAAACG 6705 36 80.6 38 ..............T....GC..T..T....A.T.. GGCACGGCGACGTGGGTGACGACGACGCCCACCGAAAT 6779 36 91.7 86 ..........T.......T.............T... TTAAGCGGCTGATTCTGACGGAGGTCTACGCGATGGACCTGTGCTCAACGCCTTACACCACTGTGAGTGCCTCACAATACCCAGGC 6901 36 72.2 0 ..C......A.......A.....A.T.C.CT...CC | T [6926] ========== ====== ====== ====== ==================================== ====================================================================================== ================== 39 36 94.2 38 GTGCTCAACGCCTTCCGGCATCACGGCGAGCCACGG # Left flank : CAGGTGCGGTTGGTGGCGGTGCCGATGGCGGTGGAGGTGAAGCCGTTGGTGGAGGTGCCCCACCAGTACGTGCCGCCGAGGGCGACGCCCTGCTCGACCTGCGCCGGGGACTCGTCACCGGCGACGGGTGCGGTGTCCGTGGGCTGCTCCAGGGGCTCGCCGCCGCAGCCGACAGTGAGGGCGGTGAGTGGCAGTGCGAACAGCAGGTTGCGCACGGCCTGTCGTGAACACATCGAGTGCATGAGTGGGCCCATTCCTTGTGAGTGAGTCGCTGCGACGTGCTGGAGCGCGGTGATATGCGCAGGGCACGCCGACGGTGTCCCCGTGACGCGGGCCGCGGGGTGCGGACCTGTGTCATCGCGGAGCGGGGATACGCAGAGCAACTCAGGTGCCAAGGGATTGGGGGCACCGTGACGTAGGGATGATGCAGGTCTTGCACTGTTTCACGAGGAGGTCCGTGCAAGTGCTGCTCGGTGTTGCAGGGGTTGCACCGTGGGACG # Right flank : CGACACCATCTATTCAAATATCAAAAAACACTTATCCGTGCGTCTAGCCCTGGATTCTCCAACTTCAGCCATCCGCACCTTCCGCTAAACTCCGGCATCGTCGAAACGTCGACGGTTCCATCAACAGCCTTCACTAGGATGATGGCTCACATCCGCGCGACAAAACCGCAGAAACCAACGGCCTAACAACTCAACCGCGAGGCACAGGCACGGCTCCCGCTCGCACGCTCTTCGCGAGGAGTCGGGCCGGCGAACTCACGCGAAGCTCCCGGGCCGGTCTTCCTCCATCCGAGGCCCCGCTCCCACCCGCAGCCGAGTGGGCAGGAAGAGGCCACAGCCCATATGGCGCCGCCCACCGAGTCCCTGTTCCTGGAGGCGCACGGACGAGCGCGCGGACAGGTTGCTCAGCGTGAGCGCATAACCAATCACCTTCTTCCCGGCGATGGCCACCACCCGCCTGCGGCCCACGTGCACCGTCCCTTCGCACTCCAGCTCCGCGA # Questionable array : NO Score: 5.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCAACGCCTTCCGGCATCACGGCGAGCCACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [14-48] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 24286-24762 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMU010000036.1 Myxococcus sp. CA033 NODE_36_length_97608_cov_19.58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 24286 36 100.0 40 .................................... TTGTGGAGAGTGCGCAGAACCATGCCGCGCCGTCCTTCCG 24362 36 100.0 36 .................................... GGACTGGAGTCAGCCGTCTCTGGCGGACACCAGCTT 24434 36 100.0 34 .................................... AGGTCATCGCGGCGTGGCGCAAGCTGATGGGCGA 24504 36 100.0 36 .................................... TCCTGGTGGCGCGCTCTTCTGGGCGAATTTCAAAGA 24576 36 100.0 38 .................................... AACAGTCGGGTCTCTACGATCTCGCGCGCGAATCGGAG 24650 36 94.4 41 .......G.......................A.... GTCGGAGTCTGGGCGAAGCGGACGAAGCCCCGCCGTATCTT 24727 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 7 36 99.2 38 GTGCTCAACGCCTTCCGGCATCACGGCGAGCGACGG # Left flank : GCATCCAGGGCATCCTTGCAGTCTTCGTCGACGATGAGCGGAAGAAAATTGTCCCTGAGCGGGTGCGAATCCAATCCTGAGCAGAGGGGGAGTTGAACGGTACGATTCGCGCTGGCTGGTGGACCGAGGCAAGACTTTGGCCATGCCCAAGGTGACGCTGGTGGTGCCAGAGGAAGTGGCGCGGTTGCTCAGGGCCATGGAGGCGAAACCGCGCGAGGAGGCGGCCGCTGCTCGTGCCGCGGGCCTGTCCATTGGTAGCGGCGACGTCGAGGCCACCTGCGAGTCTCTCGTAACTCCGCGCATGAAGCGTCCTGGCAACCGAGGGAAGGACGAGGCTGGCCAGCACACCTCGACCTGCGCTCGCTGATGCACTCCGACCGCTGGGACGCCGCCATGGCTCGCGCCCGTGCACGCTCAGGTGAGAAGAGCTGCGTGATCAGGATTGGAGCAAGCCCCCGTGAGGCCGCGGCCGAGAGGAATGGCGCGTGTCCTTCACCGTG # Right flank : GTGCCCATCTGAATACTTCAAGAATTCCAGCGACTTACCACCCCGGTTTTCAAGCACCCCCACGCCATGATGGACCGCCACTTCCCGCCGACACACCCACATCATCCAACCCATCAAAACTCCTGGGGTTTTCACCATTCAAGCACCTATTCACCTATCAAAGAGCATTCAACCCCGCGTCAGGACTCAGCTTTTCTTCCCTTTGCCACTCAGCAAGCCACGCCACTCACAGATGCTTGATTGTCCAACGCAGGACACCTCGGCCCTTTCGGAACTCCAAAGCAAGCCCGCCCCCCAGTCGCATCACTCACAACCTATCCACGGCCCTACCCAGAGTGCCGCGCACTCCCAAGCATCCCGCACGCAAATCAGAAACTGCCCTAAACACAGACGGACACCAGCACACGGATGGACCACTCCCGTGACACGGACGAGCCCACGAATGTTACGCGGCCTCACCCCGTCTGAAGCGTGAACACGGGCACGTAGCGTTCATCCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCAACGCCTTCCGGCATCACGGCGAGCGACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //