Array 1 678589-688190 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043480.1 Methanothermobacter sp. THM-2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================== ================== 678589 30 100.0 36 .............................. TTTGTTCCGCATAATATATATTGTTTTTTGCTTTTA 678655 30 100.0 35 .............................. GTGGTGGTTTTTGGAGGATTAAATTATGAAAGAGG 678720 30 100.0 39 .............................. CACTGCAGGGCGGGGTGTTCAAGAGGGAATGGTTTGAGG 678789 30 100.0 36 .............................. GTGTCTATCTCCTCCCTCGCAACCACCCCGGTTATA 678855 30 100.0 36 .............................. ATTATACTGTCCCTTTCCAATTGGCTGGTGTTCCCT 678921 30 100.0 38 .............................. ATGTTGAGATTGTGCTCAGGGCGGTGGATCGTGCCTCC 678989 30 100.0 38 .............................. AGTGTTTATTTATGTTTTTAGTTGTTATTTTTGTTTTA 679057 30 100.0 37 .............................. TTTGTGTGATTTTGTGGTTGTTTTTCTTGGTCTTGTG 679124 30 100.0 37 .............................. TATACATGTCTTTTTTATATTCATTTGGTATGTCAAC 679191 30 100.0 38 .............................. ATTTGTTTATTTGTTTTATTAATTCTTTATTCATATTT 679259 30 100.0 38 .............................. ATTGTGTATTTGTCGTTGTTTACAATTAGATTCAATAT 679327 30 100.0 36 .............................. TCTGTATTTTCTATAGAATAATCTTTTTTTATAAAT 679393 30 100.0 36 .............................. TTATATATTTGTCAAGTTCGTTGAAATTAGGTATGT 679459 30 100.0 35 .............................. ATGTTAGGCTTGTTAAGGGAGACAAAAACATGTGG 679524 30 100.0 37 .............................. CGGGTAAGTGGTGATAGAGATGAACATAGCGAAAGTA 679591 30 100.0 37 .............................. ATAACAGTTTGTGGACTATATCCGCTGGTGTTACACT 679658 30 100.0 36 .............................. TGAGACCAAGACACTCACATTCCCCAGTGGGGCCAC 679724 30 100.0 37 .............................. CTTGCATTCCCCACCGCGGGGGTGCATGATGACCAGG 679791 30 100.0 37 .............................. ACAGGTGATCCTCCTGTGTTTGTGACTGTGAATGATG 679858 30 100.0 37 .............................. TTGGTTCGGCTATTAGTAGGGAGGAGCGATATTATGG 679925 30 100.0 38 .............................. TCTGGTTCTATGAGGCACGGGTATTGGGGACCCTTCAG 679993 30 100.0 39 .............................. ACCGCCCGGGAGATGGAAGTCTTCTACGGCGGAGGCCGA 680062 30 100.0 36 .............................. TGTATCGCCCACAGGCCCCTCCCCTCGTCTGAGCCT 680128 30 100.0 36 .............................. CATCCAATCATATAATGGGAAGCTCAGGATCCAATA 680194 30 100.0 37 .............................. ACAGCTGCTACTCCTTCTTGTTCTGTCAATATTTCAC 680261 30 100.0 38 .............................. CTCGCGAATAAGATCAGCATTCCACCCGGAGGATGATA 680329 30 100.0 38 .............................. TCATTGTATTTGATGAACTCGAAGAACGCGTCCCCACG 680397 30 100.0 37 .............................. TGGTATCTGAACAGTTTAAAAGGTTCCTGGGGAATAT 680464 30 100.0 36 .............................. AGGATGGCATCGCTATCAGACTTGATTCGCTACTGA 680530 30 100.0 36 .............................. AGGATGGCATCGCTATCAGACTTGATTCGCTACTGA 680596 30 100.0 36 .............................. CCGTGTGTGTTAGAGTCCCATCCAGGCCCTGACCCA 680662 30 100.0 37 .............................. ATTGAAGAGGAGAGGTGAAAGGAATGGTAGTGAATGA 680729 30 100.0 37 .............................. TCCTCTTTGAAGACTCATACTACTTAGATAGTTTTGA 680796 30 100.0 38 .............................. TTCATGTGTGGAGATCATGAAACTACGGAATGGTATAA 680864 30 100.0 36 .............................. TAACCAAGCACAAGGAGGGCATGGAAAAAATGGATA 680930 30 100.0 35 .............................. TACCATTCCGTAGTTTTATGTGTGGAGATCATGAA 680995 30 100.0 37 .............................. ATGGACTCCACAGAGCATATCATGAACCGGGTGAGGG 681062 30 100.0 38 .............................. TCATTGTATTTGATGAACTCGAAGAACGCGTCCCCACG 681130 30 100.0 37 .............................. TGGTATCTGAACAGTTTAAAAGGTTCCTGGGGAATAT 681197 30 100.0 36 .............................. AGGATGGCATCGCTATCAGACTTGATTCGCTACTGA 681263 30 100.0 36 .............................. AGGATGGCATCGCTATCAGACTTGATTCGCTACTGA 681329 30 100.0 36 .............................. CCGTGTGTGTTAGAGTCCCATCCAGGCCCTGACCCA 681395 30 100.0 37 .............................. ATTGAAGAGGAGAGGTGAAAGGAATGGTAGTGAATGA 681462 30 100.0 37 .............................. TCCTCTTTGAAGACTCATACTACTTAGATAGTTTTGA 681529 30 100.0 38 .............................. TTCATGTGTGGAGATCATGAAACTACGGAATGGTATAA 681597 30 100.0 36 .............................. TAACCAAGCACAAGGAGGGCATGGAAAAAATGGATA 681663 30 100.0 35 .............................. TACCATTCCGTAGTTTTATGTGTGGAGATCATGAA 681728 30 100.0 37 .............................. ATGGACTCCACAGAGCATATCATGAACCGGGTGAGGG 681795 30 100.0 38 .............................. TCATTGTATTTGATGAACTCGAAGAACGCGTCCCCACG 681863 30 100.0 37 .............................. TGGTATCTGAACAGTTTAAAAGGTTCCTGGGGAATAT 681930 30 100.0 36 .............................. AGGATGGCATCGCTATCAGACTTGATTCGCTACTGA 681996 30 100.0 36 .............................. AGGATGGCATCGCTATCAGACTTGATTCGCTACTGA 682062 30 100.0 36 .............................. CCGTGTGTGTTAGAGTCCCATCCAGGCCCTGACCCA 682128 30 100.0 37 .............................. ATTGAAGAGGAGAGGTGAAAGGAATGGTAGTGAATGA 682195 30 100.0 37 .............................. TCCTCTTTGAAGACTCATACTACTTAGATAGTTTTGA 682262 30 100.0 38 .............................. TTCATGTGTGGAGATCATGAAACTACGGAATGGTATAA 682330 30 100.0 36 .............................. TAACCAAGCACAAGGAGGGCATGGAAAAAATGGATA 682396 30 100.0 35 .............................. TACCATTCCGTAGTTTTATGTGTGGAGATCATGAA 682461 30 100.0 37 .............................. ATGGACTCCACAGAGCATATCATGAACCGGGTGAGGG 682528 30 100.0 39 .............................. CCAGTCCTGCTGTCCTGTGATATGCTCCTTGAACCAGTA 682597 30 100.0 39 .............................. AGGACATGAAGGATGAGGATATGGATGAGGCCCCATCAG 682666 30 100.0 37 .............................. TGATGCATACATACTTTTAAGTCTCAATGATGAGGTT 682733 30 100.0 37 .............................. ATCAGGATGGAGAATATGGGTGTGCGGTAGTACCTTG 682800 30 100.0 38 .............................. TCCCTTCAATCATCTCATTCACCTCCTATCCAGTTTCT 682868 30 100.0 37 .............................. TCTGTTGGAGTGTCTCTGTGAGGCTCCGGGTGGTTTC 682935 30 100.0 37 .............................. TGCTGCTCTGCTTCATATCCACATGATCATAGATCTC 683002 30 100.0 38 .............................. CATCCCCATCCCCTCAGGGGAGAAATTCATGGTCTCAG 683070 30 100.0 37 .............................. ATTCTAGGCGTATAATCCTATCCTCATCCTCCTCCAC 683137 30 100.0 37 .............................. TCTGGAGGTTATACGGCAGGGAAACAAGTTATGGTGG 683204 30 100.0 35 .............................. GCCTTGGCCAGGGCACTGGCCTCCCCGGCTACCGC 683269 30 100.0 38 .............................. CCCTGTATCATCTGATTCCCCAGGGCCGAACCGAACAG 683337 30 100.0 37 .............................. GCCTTGGCCAGGGCACTGGCCTCCCCGGCTACCGCCT 683404 30 100.0 37 .............................. AGAGGCCTCAGGGAGAATCTGAGCAAGGAATCAGAGG 683471 30 100.0 36 .............................. ATGGTCCCGTAGGCTTCTGGGCCTCCGTGATGTACT 683537 30 100.0 38 .............................. AGGAGGATTTCGAAGCCTCTAAACTCCCAGGGATGCTT 683605 30 100.0 39 .............................. GCATGTGAAACTCGGGCCCCTGATACTTCTCCACGTCGG 683674 30 100.0 36 .............................. TCCGATTGACCGAACAGGAGGGTTCCGAGGAAGAAA 683740 30 100.0 37 .............................. TCTGTTGGAGTGTCTCTGTGAGGCTCCGGGTGGTTTC 683807 30 100.0 37 .............................. TGCTGCTCTGCTTCATATCCACATGATCATAGATCTC 683874 30 100.0 37 .............................. AGAGGCCTCAGGGAGAATCTGAGCAAGGAATCAGAGG 683941 30 100.0 36 .............................. ATGGTCCCGTAGGCTTCTGGGCCTCCGTGATGTACT 684007 30 100.0 38 .............................. AGGAGGATTTCGAAGCCTCTAAACTCCCAGGGATGCTT 684075 30 100.0 37 .............................. TCGCCCGTAGGGGGCCTCCTTTATGTCTCATGGCCTT 684142 30 100.0 38 .............................. TAACACATTCTCCTCCCTCTACGATGACTTCAAAGTCT 684210 30 100.0 35 .............................. ATTGTGGCCTCTAAGGCGATTAGAAGCGCTTCCAA 684275 30 100.0 37 .............................. CTTCTGATCAACCCCACTGCAAGTGAAAGTGAGGGGA 684342 30 100.0 38 .............................. CTGGTGAGTAGGAGGGTCTGCTGGTAGAAAGGGACATG 684410 30 100.0 38 .............................. TTGGCTTCCACCCCATATTTGCCGAGGAGTATCTGGTT 684478 30 100.0 38 .............................. CCAGTTGCTCCTGAGCCCCTGCTGGTTTCCAGTACACA 684546 30 100.0 38 .............................. TCATCCGCAGTGTACCCAGGGAGTGATTCCAATCGTTT 684614 30 100.0 39 .............................. TTGCATGCACCCTCCTGGACCCGCAGAACGGGCACACCA 684683 30 100.0 39 .............................. TTGAGCTCTTAAAACAAAAAAGAGGATTTTAGACAGCCC 684752 30 100.0 37 .............................. ACCGTCGACTGCAGACGCAGACGAGTCTACGATTCCA 684819 30 100.0 36 .............................. ACATGTCCTTGAACCCTTTCAGATCCACCTTATCCT 684885 30 100.0 36 .............................. TCTGTCACCCCTGATCACCACCCCTCCTCTTCTTTC 684951 30 100.0 37 .............................. TGGTTGAAGATGACTGGGACCTCCGGTCTCGGGTATC 685018 30 100.0 37 .............................. GGGGATGTCACTTGGTGGGCGCCAAAAGAACTTCCTT 685085 30 100.0 37 .............................. TAATACAAGGTAATGACACAACAGCGGATTACCGCAC 685152 30 100.0 42 .............................. TCGAATCGTTTCTGACTCCCCGCCTCCACGATCTCGGAGTGC 685224 30 100.0 37 .............................. TACACGCAGGGGGCTCCAGAGAGAAATCATCGACCAT 685291 30 100.0 36 .............................. CTCCTTCAATGGCTTCGGAGTAGGCTTCAGGGTCCT 685357 30 100.0 37 .............................. TGGTGCGAGCGTCAAATTCAGTTATACAAGCACACAG 685424 30 100.0 38 .............................. GATGACGGCACCGCGACGCCACAAGAAGTGGGATCCGC 685492 30 100.0 36 .............................. AGAGCCTCCCTGATCTCATCCACAGGGACACCACAC 685558 30 100.0 36 .............................. TGTAGTCGGGGTCGTTCATGGTTCTGCCTCGCGGAT 685624 30 100.0 37 .............................. CAAGGAGGTTCAGAGGAACGAGGCCCACGCCCAGAAA 685691 30 100.0 37 .............................. CCCTGTATCATCTGATTCCCCAGGGCCGAACCGAACA 685758 30 100.0 38 .............................. ACTGTAGGTGTTGTTTTTAAGGGCTCTGATGACTGGTA 685826 30 100.0 37 .............................. ATGTATGAGTAACCAGGAAATATTTGAGGAACTACTG 685893 30 100.0 38 .............................. AGCGCGAGGAATTCCTCAAGACCCTTGAGGAGAGGGTG 685961 30 100.0 42 .............................. TGAGCATGTGGAATTCGGGGCCCTGGTACTTCTCCACATCAG 686033 30 100.0 34 .............................. GGTGAAATGTTCTGCAAGGCCACAGGCACCCAAC 686097 30 100.0 36 .............................. CTACACGGATAAAGCAGACTCCATAATCGCCACAGT 686163 30 100.0 36 .............................. TTCCTTGAGAACCTTCGCACTGCAAGGAGGGGGATC 686229 30 100.0 36 .............................. ACCTGCAGCAGGTGTGGGGCGGATTACTGTGGAGTC 686295 30 100.0 37 .............................. ACATACCCTGAACTCTCACTCCCAGGGGCTATAATGG 686362 30 100.0 38 .............................. CCTCCCAGTTACAGTCATTGATAAGCCGATTGATGAGA 686430 30 100.0 37 .............................. TACGACTCTCCCAGGGAGTAATGTGCATGGGACAAAC 686497 30 100.0 37 .............................. GAGTATCCTCCCATAAGGGTAGTCTAGTTGTTTTCCT 686564 30 100.0 37 .............................. ATCATCCAGTTTTTAAATCTGCCAGAGCCAAGATTAT 686631 30 100.0 37 .............................. CTGGTAGAATGGGACGTGGGGTATGTAGGGGTTGAGG 686698 30 100.0 39 .............................. TTTGTAACAATATATGACCATACATCCATCCATGTCAAA 686767 30 100.0 37 .............................. AATGATGAAGAGGTGATGAATCCTCCCCCTGAGGATT 686834 30 100.0 38 .............................. ACGGTGAAGTGGAAGTGACTGTGTATGCGCGTTGATGA 686902 30 100.0 37 .............................. ATGGGAGTGTGATATGTTGTGACTTGGAAATTGTATA 686969 30 100.0 37 .............................. TCGTGGAGAACCATCTGTCTAAGACTTCGTTCTCAGG 687036 30 100.0 38 .............................. TTGTTATCACAGCCAATCTATGGGGCCAGTGTTGTATC 687104 30 100.0 37 .............................. AACTAGTCTCTTTAGTATGTCAATATTACTCATCCAA 687171 30 100.0 37 .............................. CCGCCAATGTAGGGGCGCTCCCTCCAGAGGTTGAGGG 687238 30 100.0 37 .............................. TTGTGACGGCGGATCCGGTGAGGGCGTTCTGCATACC 687305 30 100.0 37 .............................. ACTCGTAGTCGAGTAGGTCGAGGAAATCCTGCATCAA 687372 30 100.0 37 .............................. CTACCCTCAAAGAAGATCAAGAGCAAAAATTCCCGCG 687439 30 100.0 37 .............................. CTGAACCGTCCATCCAGTCTGATGAGTTCCTCTGTAA 687506 30 100.0 37 .............................. TTTCCCTGATCTGGTTTTTCTCATAGTTTCTTTCCTG 687573 30 100.0 37 .............................. CGAAATATGAGAAAAACCCATACCAGAGAGCCTTATG 687640 30 100.0 38 .............................. AATATAAATAAACAAATACTTAATGTATTAGAATATAT 687708 30 100.0 38 .............................. ACTGTCCGTGGTGAGGGTGTCCGGTCTGAGGATGTTGT 687776 30 100.0 37 .............................. TTTTCGTATCGTATCAATTTTATGTTTTTATATGTGT 687843 30 100.0 37 .............................. AAGTTCGCCTTCCAGCAGTTGAAGATGGCATGGGATC 687910 30 100.0 35 .............................. ACAGTGAACTGAACCTCAAATTCGGTGAAGGAATT 687975 30 93.3 35 ........G....T................ ACAGTGAACTGAACCTCAAATTCGGTGAAGGAATT 688040 30 96.7 90 ........G..................... ATCAACTATTAGTTGACAATTAGTTCAATAGATAAATTATGTAAATAAATATTTGGTATTGTGTGTGGTTAAGTTCTTGAATTGGAAATA 688160 30 73.3 0 T...A...TC....C....G.G..T..... | T [688177] ========== ====== ====== ====== ============================== ========================================================================================== ================== 143 30 99.7 37 GCTTTAAACTAGACGAAATCGTATGGAAAT # Left flank : TCAAACATGTTCTAGGCGATCAGGAGTATGAAAGTTTTAAAGCATGGTGGTAATGGGTTAGTTGCTTGTATCTTACTTGTAGTTTATTATGGGATCTCGCGGTGTAGTTGAGTATCTGGTTGTGTGGTCGCATGTATTTACTTGTAGTTTATGATGTAGATGTTAACAGAGTTAATAAAGTGCACAAGTTTTTGAAAACATATCTCCACTGGAGACAGAATTCTGTATTTGAAGGTGAGATCAGCAGAGCACAATTTAATGAAATAAAAAGAGGTCTTAAAGAGTTGATTGATGAAACTTCTGATTCTGTCCTGATCTATAGGTTGCCTAATAAGAATTATTTATACATAGATGTTATAGGAATTGAGAAAAACCCCATTGAATTTATTATCTAGGTCTACCTTTATAAGTAAATTGCATTATTGCAGGTAGACTTATATGTATATTGAAACAAAGGATTCTCAGTAAGTATTTCATTAAAATATCAAAATATCGGCTCG # Right flank : TTGACATGACTTGACTTCGTAATATATGGCTATAACGAATAAAAAAATGAGGGCTCATCCGGCCCCACATAGAAACCTTCCACCTACAGCGTCAACCCATGCCTCACCAATCACCATTTTGTAGGAGGGACTGGAGGGATTCCAGTCATACACCAGGACATGGTAGACGGGCCTCTTAACTCTAAGACGGACAATCTTCCCCCTCGTATTAAAACCTGAGATGTACCTTGGGGCTTCTTTATCAGTTTCGCCTTCAACTTTAACTTACTGTAATCCCCTGGAACGGATTTTTTAACAACCTTAATGGCCTTTGAGGGGGATATAAGGCCATAGGAATATTCACTGAAGGCCATGGACCCCACAAAAACAATCGCCACAATTAAAGCAGCGATGGTGACTCTTCTCACAGAAACACCTCCCATAAATGATGAATCAGATCATCAACTCTCAATTGATTTTATAATTAACATTTCATTACACCCGGTCTCCTCATGGTATGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAAACTAGACGAAATCGTATGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1123740-1128342 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043480.1 Methanothermobacter sp. THM-2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1123740 30 100.0 37 .............................. CGATCCTCCTCATCTCTGGGATCCATGAGGCCGCTAT 1123807 30 100.0 37 .............................. TATGAGGAGTTCAGGGAGGAGTTCAAAGACTATTTGA 1123874 30 100.0 36 .............................. GATCAGCCCCAGCGTCGCTATAAACAACATCAGAAC 1123940 30 100.0 35 .............................. AAGTAGGGATTATATAGGGAATGAAGTAATACAAA 1124005 30 100.0 38 .............................. TCTTATGACGGTTTCTGCCCTTTTTTGGGGCATTATGC 1124073 30 100.0 38 .............................. TTTCTGCAAAAAAATTCACAAAAAATTTTATAGTTTAT 1124141 30 100.0 38 .............................. TAAATAACGACAAATACACATTAAACTAATTTAAATGT 1124209 30 100.0 34 .............................. ATTTATTTTTTTAAGTGGGTAGGTAGTAGGTAGG 1124273 30 100.0 37 .............................. TTAAATATATCATATGATTCTTTATCTTTTAAGTTAC 1124340 30 100.0 38 .............................. GGTGTATGCCCTTTTCTCGTACTTTATGGATGCTATTG 1124408 30 100.0 36 .............................. GGTTCTATTTTGAGAATATGTAAAATTTGTATATAA 1124474 30 100.0 36 .............................. TGATAAATCATGATAAATAGTAACCCGGAATTAAAA 1124540 30 100.0 36 .............................. TGGCTGTTCTGGCGCCTTTTTTGAGCTCCCCGCTGA 1124606 30 100.0 35 .............................. TAAAAATTTTGAAACCGTGCTTAACTTTTGTGACC 1124671 30 100.0 36 .............................. TCGATTAACTGCTTAATATCGTCAAGACGGTCATTT 1124737 30 100.0 35 .............................. GTCAGAGAATGGGGAATACCTTGTCACAGTACTGG 1124802 30 100.0 36 .............................. TAGTGAGATACATCAGGACGTTCCTGCAAGTGATGA 1124868 30 100.0 36 .............................. TCGGGGTTCCCCTCAGCCGCTTAACGTCCAGGATGT 1124934 30 100.0 36 .............................. TGAAGGAGCCTCACAATTACCGAGACCATGGAAACT 1125000 30 100.0 35 .............................. GAACACAATAAGTTTAGGTATTCCTAAAAATTCTT 1125065 30 100.0 36 .............................. CTTATTTTTACAACTGTTCAATTTGGCAAATTTTGG 1125131 30 100.0 36 .............................. CGATATCGCAAACCATATTCCTATATTCACTATCGG 1125197 30 100.0 36 .............................. GGGTAAGAAAATAAAAAATGTTCAAAATTTGGGTCT 1125263 30 100.0 35 .............................. ATAGATATAGATATGTGGTTGGAAACAACCATAAA 1125328 30 100.0 36 .............................. TCTTTCTTTCTAATTTTTTCTTCATCTATTTTGTCT 1125394 30 100.0 35 .............................. TTGAAGTTCAACCACATGAATTAACCATATTACAG 1125459 30 100.0 37 .............................. GAGAGATAATATTATTGTATGAGGCCCATGGTTCCTC 1125526 30 100.0 36 .............................. GGTCTAAATCGATCTCACTACTCCTATCCTTCAAGT 1125592 30 100.0 37 .............................. TTTAGGTATAAAGCCACATTTGGGTTTCCATATTGGG 1125659 30 100.0 36 .............................. CGAGGCAGGCGGTGGCGACGCTGCAAGGATGCAGGT 1125725 30 100.0 35 .............................. TCAGATAAGGATTCTAAGTCCCCCTCTACATCAGA 1125790 30 100.0 36 .............................. CTTCGATGTGGCGGCTGCGACACTCGGGGCATTCAT 1125856 30 100.0 35 .............................. TACACCCGATCCCCAGGGCCCATCATCTTGATATG 1125921 30 100.0 37 .............................. GTTTTGAGGTCGTGGAGGGTGTCCTCCACGATCCTCC 1125988 30 100.0 36 .............................. AATACAGTGTCCGCGAAGACAAGGATGCAGTGGAGG 1126054 30 100.0 39 .............................. GGAGGGCCTCCGCGGTCTTCCAGTACATATTGTATTCAT 1126123 30 100.0 35 .............................. ATAAATGATTTTATGCGGTTTTGTGAACATATTAG 1126188 30 100.0 39 .............................. TGATTTTCTCTACGACTTTTCCCATCTTCATGTTTATTC 1126257 30 100.0 36 .............................. AAAACGAAGTCATCGACATGCTCCGCCAGCATGTCG 1126323 30 100.0 38 .............................. CCATCATGTCACCTCATGCCCAAAACGTCCTTTTCCAC 1126391 30 100.0 36 .............................. CAGGCTCTGCATGCACCTACAGGGCATGCAGGAAGG 1126457 30 100.0 37 .............................. CATGGTCGTCGGGGATGTCTCCGATGACCTCCTCCAG 1126524 30 100.0 38 .............................. TCATTTCTGGAGGTAGTGGAGGACACCCTCCACGATCC 1126592 30 100.0 37 .............................. TGTCTGTCAACATGACTGCGGTGCCGTAACCTACCCC 1126659 30 100.0 35 .............................. AATGGTAGATCAATCCTCATCCCAGCCACATAAGG 1126724 30 100.0 36 .............................. TATTCTCTGAGTAATTGTTTTATAGCCTTCTGGAGA 1126790 30 100.0 32 .............................. CCACTTCTCCTATCACCTCGAGAAACTTCTCG 1126852 30 100.0 35 .............................. CGAAGGAGCAGAAGAACTCCCCGACGGCCGGATGA 1126917 30 100.0 36 .............................. CACCCCTTGCAGAACAAATGATACTCCTTATCAACC 1126983 30 100.0 37 .............................. CTCAGCATCAGTACTGTGGAGCCACTGGCACGCGCGG 1127050 30 100.0 38 .............................. TCGATTAAATGGAGGACCTTTAAAAGAGACTCAGCCTC 1127118 30 100.0 37 .............................. TATTGTAGAACTCCTCAAATCTCTTCTTCATATCAAG 1127185 30 100.0 40 .............................. ATGAAAACAGATTCAAAAGGAGTAATAACCGGGGAAACAC 1127255 30 100.0 36 .............................. TGCCCTGGACTTCCTTAATATCGGAGCCTAGGATGT 1127321 30 100.0 36 .............................. ACGCATGCGAGGTTCTCATAGATGCTGCGTGTTTCA 1127387 30 100.0 37 .............................. AGGAGATAAAAGGCCTCCTTGAGGAGGCCATAACAAA 1127454 30 100.0 31 .............................. ACGTGCAGAGCTTCAGCCTAGAGTACGATAA 1127515 30 100.0 35 .............................. TCGGAGATGTATGCACACACAAAAAACTGTGCGCA 1127580 30 100.0 35 .............................. TCGGCCTATCCAGGAGTAACCGGGTGACCTCAATA 1127645 30 100.0 37 .............................. TTAGGGGATGGTTTCTTGGTGGGCATGAATTATCTGT 1127712 30 100.0 37 .............................. GCGGTTTGTGGTTTCTTGTCGGGGAGGGGGATGTAGT 1127779 30 100.0 36 .............................. CCTTGATGGTGGCAGGGCGGGAATGGTCTTCACAGA 1127845 30 100.0 36 .............................. TGTATAGGACTTACGATTTGAGGGTCTATGATGAGA 1127911 30 100.0 36 .............................. AGGAGGTCAGTGACCTCTTCGAGAGGAAGTACTTGT 1127977 30 100.0 38 .............................. CAGATAGTCTTTTATTTGTCGTTGAAAGCACCTACCTC 1128045 30 100.0 37 .............................. CGTACACGTTCTTCGCTGATCGTGTCCGCGCAGCGAG 1128112 30 100.0 40 .............................. CAGTTACACAGTGAAGGTGAAAAGACTCAATCAAACCACA 1128182 30 100.0 35 .............................. TGTTGAGTTGTTACATGAACGACTCGACAATTTCG 1128247 30 100.0 36 .............................. GACACAATATAAACCCAGCGCACAAACACCGAAACA 1128313 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 70 30 100.0 36 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : AGGCTGTTAATGATCCATATAATTGCTTAAATTTTGTTTTTTTAGATTATAAAGATTTAAAGGATTTTGATTCAATAATGGAAATTCCAATAAACTCTTTGAAATCATAAAATATTTTTAATGACTCTAATGATCATATATCACGCTAAAAATTATTTTTAAAAATTTTAATCCAATTAAATTATTTTTTGAGACCATTAAAGGGATATCCTCCAGAAGTTTTTGACCATTTTCCAGCCAGCATTTTATAATAACCCTATGTTATTTTAAGCTTATTTTATAATTAAAATGTCTCATAGTTCATTTTTAACTTTTTATCTCGCTAAAATTCTGATTTTCATTTTTTAAATTATTCATGATCTTTATTTTTTAATTATAAATCCCAACAGCAAGTCGTCTGTCAATATAAATGAACTGCATTATTGGGGATCGACAAATTTATAAGTCTGAGAGAAGAAACCTTAGAGTGATATAGGTCAAATAGAGAAAAAATCCGCCCT # Right flank : TCTTATTTATTGTGAATTTTCAAAAAAAGACGTCCTTTGAATTAAAAATGTGTATAAATTCGTTTAAAAAAATTTAGAGAGGTTAATGGTACTGAACCTGTTCCTCAACGCCACCCTTTGGTTTTATTTTTTCCATGGCCTCAAGGAAGTGTTTCATCGGGACATCCTCCGCGTCCATGTTCTCTCTGAGTGTCAGCATGGCGGCCTCCCTGCAGACGGCTTCAATGTCGGCACCAACGTATCCTTCTGTCTTATCCGCCAGTTTTTCAAGGTTCACGTCATCTGCAAGCGGCATATCCTTGGTGTGCACCTTGAATATGGCGAGCCTTGCCTCCCTGTCTGGATCGTCGACCTTCACGTGTCTGTCGAATCTTCCAGGTCGGAGGAGCGCAGGGTCCAGGATGTCTGGCCTGTTGGTTGCGGCTATCACAGCAACGTCCTGTAGCTCCTCAAGTCCATCGATCTCTGTGAGGAGCTGGTTCACGACACGCTGGGTCACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA //