Array 1 34000-31768 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWEJ01000002.1 Lactobacillus helveticus strain DLBSA201 Scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 33999 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 33933 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 33865 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 33797 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 33731 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 33664 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 33597 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 33530 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 33463 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 33397 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 33329 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 33263 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 33196 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 33130 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 33063 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 32997 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 32930 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 32863 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 32796 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 32730 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 32664 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 32597 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 32531 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 32465 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 32399 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 32332 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 32264 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 32198 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 32131 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 32065 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 31998 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 31932 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 31865 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 31799 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //