Array 1 504244-509579 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046315.1 Schaalia odontolytica strain FDAARGOS_732 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 504244 29 100.0 32 ............................. TGACCGAGATGCTCATCCCCGCCAAGTACAAG 504305 29 96.6 32 ............................C GGAAGTGTGGAAGGAAGGAAGTGTGCGGGGAT 504366 29 96.6 32 ............................T TCGATCGCGCAGCCGTCGTCGAGGCGAACCGT 504427 29 100.0 32 ............................. CCGATCGACCTAGCCGCGTCCCGCCGCTCGCC 504488 29 96.6 32 ............................T CGGGACAACACAAGTATGTCCCGAAACCGGGA 504549 29 96.6 32 ............................C CCCGATCCCAGCGGGCATCACGCCGCCCACAC 504610 29 96.6 32 ............................A TGGGAACACATCGGCGCACTACGTGGCCAGCG 504671 29 100.0 32 ............................. GTTTTCCTCTTCTCTCAGGGCTTCTCGGCTCC 504732 29 100.0 32 ............................. GACCGCGCAACCAAGGCAAAGCTCATTCATTG 504793 29 96.6 32 ............................T CGCGCGGCGACCTCGATGCCTGCCTCGGTTTC 504854 29 100.0 32 ............................. CTAACGGATTCGCTGGGCGAAATCATCGACCA 504915 29 96.6 32 ............................T CGTCTCCTTCGACCCCGGCTCGTTCTGGGACA 504976 29 96.6 32 ............................C CCGCCAATGGCGTGCGCCGCATGAGCTCCCTC 505037 29 96.6 32 ............................C TGGGATGACGTCGAACCCGTCGACATCATATG 505098 29 100.0 32 ............................. TGGGTCGCAGAAATGCGCCGCACGCCCGTCGC 505159 29 100.0 32 ............................. CCAGCACGCAGCGAGGCATCAAGACCCCGCTG 505220 29 100.0 32 ............................. GTTTTCCTCTTCTCTCAGGGCTTCTCGGCTCC 505281 29 100.0 32 ............................. GACCGCGCAACCAAGGCAAAGCTCATTCATTG 505342 29 96.6 32 ............................T CGCGCGGCGACCTCGATGCCTGCCTCGGTTTC 505403 29 100.0 32 ............................. CTAACGGATTCGCTGGGCGAAATCATCGACCA 505464 29 96.6 32 ............................T CGTCTCCTTCGACCCCGGCTCGTTCTGGGACA 505525 29 96.6 32 ............................C CCGCCAATGGCGTGCGCCGCATGAGCTCCCTC 505586 29 96.6 32 ............................C TGGGATGACGTCGAACCCGTCGACATCATATG 505647 29 100.0 32 ............................. TGGGTCGCAGAAATGCGCCGCACGCCCGTCGC 505708 29 100.0 32 ............................. CCAGCACGCAGCGAGGCATCAAGACCCCGCTG 505769 29 96.6 32 ............................C CCAGCTGACCTGCAGGCTGAGGAGATGCTCTT 505830 29 96.6 32 ............................C CCGCCTGGGAGCCGATCGTCGTCGCGCGCCGC 505891 29 96.6 32 ............................T CGCCGCCGCATGGCTCGACGACGAGGGCGACC 505952 29 96.6 32 ............................C CCAGCTGACCTGCAGGCTGAGGAGATGCTCTT 506013 29 96.6 32 ............................C CCGCCTGGGAGCCGATCGTCGTCGCGCGCCGC 506074 29 96.6 32 ............................T CGCCGCCGCATGGCTCGACGACGAGGGCGACC 506135 29 100.0 32 ............................. AAGCCGAAGCCTTCCAGAAAGCGATCACCGAC 506196 29 100.0 32 ............................. TACACCGTCGATGGTGACGGACGCCTCGGTGG 506257 29 96.6 32 ............................C CGCGTTGAATTGGCGCTCGCCGCGTACAACGC 506318 29 100.0 32 ............................. GAAGCCCTCAACCGTGAGCTCGCGCAGATGAC 506379 29 100.0 32 ............................. CTCAACGGGCACGTCGATTTCTCACTCTCTGA 506440 29 96.6 32 ............................C GTTTCCAGGTGGTCAGGGTTATAACCGTCGAT 506501 29 100.0 32 ............................. AACGGCGGCACGAGCATCGATCAGCTCGCAGG 506562 29 96.6 32 ............................C GAGAAAGGCCGCGCCGGCTGGCGCATCCCCGC 506623 29 96.6 32 ............................T AGATTCGGGGGTTATTTACGTGGGGTGAGTGC 506684 29 96.6 32 ............................C CGACGATCGCGCACATCATCACGTCGCCGTCT 506745 29 100.0 32 ............................. GCGACATCGGCGAAGCAGGACGCCAACTCATC 506806 29 100.0 32 ............................. TCAATAACTTGGTTGTGTGTTGTTGGTTACTT 506867 29 100.0 32 ............................. CGCGTCTACGCGCGCCTGGACGAACGCCTGTC 506928 29 96.6 32 ............................C ACGTCGATGGGCGGCTCGCAGGACAACGGCAA 506989 29 100.0 32 ............................. GGCTGGTAATCGGCGGGGATCTGCGCGTGGAG 507050 29 96.6 32 ............................C CCGCATTTACCTACCAACAGGGCCGGGTTGTC 507111 29 96.6 32 ............................T CGATCGCGCGGGCGCTCGTGATGGTGTTGACG 507172 29 100.0 32 ............................. CTCTCGGCGCTCATCGACGGATCGGGACAAAA 507233 29 100.0 32 ............................. CCGCTGCCGCCTGGTTCGAGGCCAACCTCCCC 507294 29 96.6 31 ............................C GCAGCTATCCGCGCGATTCGTCGAATGGATG T [507320] 507355 29 96.6 32 ..........................T.. GCGCGGCCCACGCACGCCTGGTACGTGGACAG 507416 29 100.0 32 ............................. CCGACGATCTCGGTCCCTTCGTGACGGAGTGC 507477 29 100.0 32 ............................. CCGACGATCTCGGTCCCTTCGTGACGGAGTGC 507538 29 100.0 32 ............................. CCAGATCGTGGTGCCCTTCTTCTTAATCAGAT 507599 29 100.0 33 ............................. GGCGGCTGGGACTGGCTCAAAGACGCCGCCGAC 507661 29 100.0 32 ............................. CCGCTCCACGTCAGCCGTCGCTTATCGAAGTC 507722 29 100.0 32 ............................. CGTGCCCGCAGCTGCGTCACGTTCGCGATACC 507783 29 96.6 32 ............................C CTCCACGAAGTAGCAACCGCTCTCCTGCCCAC 507844 29 100.0 32 ............................. ACACCCCGACGAGCGCCCTCGAGGCCGTGGAT 507905 29 96.6 32 ............................T GCCCCCGGCCCCACGTCTTACGCCGGCAACAT 507966 29 96.6 32 ............................C TTGTCGGTCGCATCTGACGCGGCCAAGGCCTC 508027 29 96.6 32 ..........T.................. TCCTGCCCGTCATCGGGAACCTCCTCAACCAG 508088 29 93.1 32 ...C........................C CTCCACGAAGTAGCAACCGCTCTCCTGCCCAC 508149 29 100.0 32 ............................. ACACCCCGACGAGCGCCCTCGAGGCCGTGGAT 508210 29 96.6 32 ............................T GCCCCCGGCCCCACGTCTTACGCCGGCAACAT 508271 29 93.1 32 ........T...............G.... TACTGGCCGATCGGTGGGCAGGATTATGCGAT 508332 29 96.6 32 .......T..................... GCCACAAGGCAGTTCAGGACCAGGATCATGAC 508393 29 96.6 32 .......T..................... TGCACGATTCCGGTGGTTGTCCCTGTCGTGTA 508454 29 89.7 32 ..........T.......A.........C GGCCGTTCAAGGAGTGCCAGCCCGACGAGCGG 508515 29 96.6 32 ............................C TCGCCTTGACGCCAGGGGGTGACGATGAAGGT 508576 29 89.7 32 ....................A....T..C GAGCCGCCTACCTTGGTAAAGCCCAGCTCAGC 508637 29 93.1 32 ..C.................C........ TATGGTCCGATCACCATCGACGGGGTTAAGCA 508698 29 89.7 31 ..............T......G.....T. GACGACTGGCGTGAGCTCGCGGTCGAAACAC 508758 29 79.3 32 CG...T...A.C................C GGCACCAAGCGTATGAGTGGGCTGGTAGCCTA 508819 29 89.7 32 ..........T.....T...........C ATGGCCGGGCCCACGCCCTCCGTGAGTGCAAC 508880 29 96.6 32 ............................C CGGGTGCTGTCAGCCAGGAGCGTGAGCTCCTC 508941 29 96.6 32 ............................C GCCGCCCGCAAGGCCATTGGCGTGCCCTACGT 509002 29 89.7 32 ...C...................T....C GCACATGCCGACCCTGTTCGCACGGGCACAAG 509063 29 89.7 32 ..........T............T....C CCGACACGCCAGCCCCGAGCCGATCGCACAGG 509124 29 89.7 32 ................T........A..C ACCATGGGCGGCTTCTTAAACGGCTTAGGGAA 509185 29 93.1 32 .................A..........T GTGTCAGGCTGGGGGATACCCCGGTTATGGGC 509246 29 100.0 32 ............................. GACTTGGCGCGGCGCTCAACGGCGACCCGCAG 509307 29 96.6 32 ..........A.................. TACGAACCGGGAATGATGGCGAAGCTGCTCCC 509368 29 96.6 32 ................T............ TACTGGCCGACTGGTGGTCAGGATCATGTAAC 509429 29 93.1 32 .......T....................C GACAACGGCGGTGGTCGATGGGTTGTGCCGGC 509490 29 89.7 32 ...........CC.C.............. AAGAAGAGCGGCGGGGATAAGTGGCTCCTCAT 509551 29 82.8 0 ...........CC.C..........A..A | ========== ====== ====== ====== ============================= ================================= ================== 88 29 96.7 32 GTTTTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : GTCGCTGATCTGCGGTTGTGGGATGACCGCGAGGGCGCGGTCGCTGCTGGGGTGTTGTATGAGGAGAGTGGATCCTGGTGATCGTCCTCGTGCTGTCCGCAGTGCCTGAAGGTTTGCGAGGGCACGTGACTCGGTGGTTGATGGAAATCTCCCCGGGGGTATTCGTGGGGACGCTGTCCGCACGGGTTCGTGAACGCTTGTGGGATATTGTCACCGAGAACATGAAGACTGGGCGTGCCGTCATGGTCTATCGGGCGCGCAACGAACAGGGCCTGGAGTTCTTGACGTGGGGAGACCCCTGGAAGCCCGTCGACTTCGATGGGCTGACGCTCATGATGCGTCCCTACTACTCCGAGGGACGAGGCCAATACTCCGAACCTGATCCTGCGGCGCGTCAGTTGCGTAAGCGTCCTGCGATGAGTAACTTTCAGAAGAGGCGCAAAGCTCAAGGCTTTCCAAGATCTGACCGATCTGCGCGATAAAAACGCAGGTCAGAAAGT # Right flank : ACTGGGTATCAAACACCAGTCCCTGTGGTACACGTATTCCCCGCTACCGCGGGGTTCTCCAGTGCGCCGTTGGTGTGCATACCCACCGGAATAAACGACAACGAGCCTTGCGCTTCCTAGTATCTCTGCCGTATCCTGCTCGGCTACCTAACACACGGATGAAGGAGAAATAAGGATATGAACGAGGCACAGGTGACGGACTTGGGTGCTGGTGAGGCGACGGAGATGCAGCAGGACGCAAGCGAGGCAACGGCGACGTAGCAGGGCGCGCGCGGGGCGGCTCAGACGCGGATTCGCGCGTACATCACGCACGTGGGCAGCGAGTATCGCAAGGACGTCACCTCGGGCACCTGCGAGCTCTGCATCGTCGACTGGAGCGCCCGCATCCGCGACATCTCCTTCGAACTCACGGACGTCGACACCGGCGCCACGTGGCAGGCAACCACCCCACCCTTCACGTCTGCCGGTGGAACGACATCTGGGAGATACGCGTGAACCCC # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-37] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //