Array 1 20213-22192 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEQX010000006.1 Lactobacillus acidophilus strain s-13 Scaffolds_6_87217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 20213 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 20274 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 20335 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 20396 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 20457 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 20518 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 20579 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 20640 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 20701 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 20762 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 20823 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 20884 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 20945 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 21006 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 21067 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 21128 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 21190 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 21251 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21312 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21373 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 21434 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 21495 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 21556 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 21617 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 21678 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 21739 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21800 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 21861 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 21922 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 21983 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 22044 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 22105 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 22166 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //