Array 1 509190-512853 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLEQ010000001.1 Elizabethkingia anophelis strain EA11 NODE_1_length_683573_cov_140.609927, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 509190 47 100.0 30 ............................................... CATTGCTTCATCAATTGCGTTTTCCGGATT 509267 47 100.0 30 ............................................... AATTGTTAGAAGTTGGTAGAGACTGATAAA 509344 47 100.0 30 ............................................... CTCAGCAATGTTATATACGATTTGAGTTGT 509421 47 100.0 30 ............................................... TTAAGAGCATAATCAGCATCTACAGTGTTG 509498 47 100.0 30 ............................................... TCATGGAAAGAATCCAATACATTACTGATT 509575 47 100.0 30 ............................................... AAAGTCTATTGAAATAATCTCCAAACTTCT 509652 47 100.0 30 ............................................... CCAGGTGAAACATGGGACCCGAATGCTTCA 509729 47 100.0 30 ............................................... CCAGGTGAAACATGGGACCCGAATGCTTCA 509806 47 100.0 30 ............................................... TTATTACGGGCTTTTTTTCGGTTGTAGTGT 509883 47 100.0 30 ............................................... TTGACATTCTTATTCCTTGCAACCTTATAA 509960 47 100.0 30 ............................................... GAAGTGTCGAACATTGGGGCGTTTGGGATT 510037 47 100.0 30 ............................................... GGGCTGAAAATTTCTTCCATAAGTCTGAAC 510114 47 100.0 30 ............................................... AAGAATGCAATGGAATCGAAAAAATGTATT 510191 47 100.0 30 ............................................... AACCCTTTCCGCTTCTTCTTTGTCGGCGAT 510268 47 100.0 30 ............................................... ATACAGAGGATGCGCAGGAATACGATTATA 510345 47 100.0 30 ............................................... ATCTGCATCAATATCGTCAATTGCCTTTTG 510422 47 100.0 30 ............................................... AAACTGAGAAAGTTTTACAGCTTGATCTGT 510499 47 100.0 30 ............................................... TGTATGGTATCTGCGTTCCAAATTCTAATA 510576 47 100.0 30 ............................................... GTAATTGCGTTTGTAATTTCGATTGAGTTC 510653 47 100.0 30 ............................................... AAAAGGAGTTCTGCAGAATGAAAGCGAAGG 510730 47 100.0 30 ............................................... CATATCTATACCACTTAATAATCGAGCAAA 510807 47 100.0 30 ............................................... GAGGCTCAATGAGCTGTATGGAAGCTGTCC 510884 47 100.0 30 ............................................... TACCCTGAGACTTTGGTGTTTCGGATTTTG 510961 47 100.0 30 ............................................... CGGTATCTGATACCAGAGTTTCGATAGCCT 511038 47 100.0 30 ............................................... TAAGCTCCTCATGAAGATTAAGAGCGTTTG 511115 47 100.0 30 ............................................... AGCCCGTTAATATCCTGCATTAAGGTTCCA 511192 47 100.0 30 ............................................... GGTCGAACGCCTCCGGTTGTTTAACTCTCA 511269 47 100.0 30 ............................................... GAAAATAATCACGTTCAAAAAGGGAAGTTC 511346 47 100.0 30 ............................................... AATAACCCATCTGTTAAATAGCTTAAGTTG 511423 47 100.0 31 ............................................... GGAAAAAGCAAAGATAAGCCTAAAGAATTCG 511501 47 100.0 30 ............................................... TAGAATTTGTATCTGCAAAAGATGAAAGAG 511578 47 100.0 30 ............................................... TAAGACTTAGAATATCCTTACAAAAAAAAT 511655 47 100.0 30 ............................................... GTAAATAGCGTTATTCCCATGTTATGAAAC 511732 47 100.0 30 ............................................... TAAATCCTGCCTGTCATGCAAACGTGCTTC 511809 47 100.0 30 ............................................... CGAGTCTAAATAGCCATGTGGGCGTGCATG 511886 47 100.0 30 ............................................... CGAGTCTAAATAGCCATGTGGGCGTGCATG 511963 47 100.0 30 ............................................... GGGTTCCCATATATAAAAAATAGGATCATA 512040 47 100.0 30 ............................................... GACAACATTATTAAGCTTTCAGAACTTGAA 512117 47 100.0 30 ............................................... AGAAAAAGAGAAGGTATGAGACTGCTAGCA 512194 47 100.0 30 ............................................... TATAGTTCACTACCCCAGAATTGCATAGAA 512271 47 100.0 30 ............................................... TGAAAAAATAACGTGTGAAATTAAGAGTAG 512348 47 100.0 30 ............................................... GCATATGAAGTGAGGTACTTTTATAGATTT 512425 47 100.0 30 ............................................... AGCTTTTAGGGTAGTTTCTGGTACTTCAGA 512502 47 100.0 30 ............................................... GGCCCATTCTTTTAAGGCACTAATAGGCGG 512579 47 100.0 30 ............................................... CGTTAATACATGATCTCCAATTGCTGGAGC 512656 47 100.0 30 ............................................... GTCTCTCTGTTCATCTGTGCAACCAATTTA 512733 47 100.0 30 ............................................... CAATTCCAAGCATACCCAACATACCGAAAC 512810 44 91.5 0 .....................................--..-....T | ========== ====== ====== ====== =============================================== =============================== ================== 48 47 99.8 30 GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Left flank : GATGGAAAGACCAGACCTTTGCTGGTGGCTGTAAAAACAACAGCATCATCACTATATAAATGTTATACAGGAGAAAAACGTTTGATTGCTTATCCTGAACTGATATGAAAGCCGAAAGGTTTAATGCTTACCGGATTATGTGGGTTCTAGTACTTTATGATTTACCAACCGAAACAAAGGAAAATATGCGGGATGCCAATCTATTTCGTAAACGTCTGTTAGATGATGGCTTTTCGCTTTTTCAGTTTTCAATGTATATCCGCCACTGTCCCAGTAGAGAAAACGCAGAGGTCCACATCAAAAGGGTAAAAGTCATGTTGCCTAAAGCTGGAAAAGTTGCTATTATGTGTATTACCGACAAACAGTTTGGTGATATTGAAATTTTCTTCGCCAGAAATAAAGAAGAACCACCGCCGACCTTTCAACAGTTGGAATTATTCTGATTTTTAAATTCTAAAAAATAATAAAATCCGTTGATTTTCAACGGATTAAATTTTGAG # Right flank : TAAATTAAGGTGTTTTTATTGTAAATTAGATTTACATAATGAGCCTTTTGTGGTTAACCCTGTTTAGTCGATAAAGATCATTATAAAAAAACAAAAACCTTTCAGTACTCCTGAAAGGTTTTTTTGTATGGTTTAGGTTTTTAATTTTAATCGTGCATTTCGCTTTCGACATAGCCTTCATCTTCGATCTGGAAGGTCGTATGGCTAATTTTGAAATTACTGGTCGCCTGATCGGTGAGTATCCGAAGCATTTGGTTATGCGGAATGCTTTGATCGGAGACAACATGGGCGCTCATCGCATTGATACCAGAGGTTAGCGACCATACATGGAGGTCGTGCAGGCTTTTAACACCCGGAACTTTTTCCATGGTACTGCGCAGTTCATCAATATCTACATCTTTAGGAGTACCTTCCAATAATACATGAATAGCTTCCATCAGAAGTCGCCATGTTCTTGGGAAGATCAGTAAACCAATACCTGCAGAGATCAGTGGATCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //