Array 1 898044-898313 **** Predicted by CRISPRDetect 2.4 *** >NC_016113.1 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 898044 28 100.0 33 ............................ TTTGCGCCAGGTCCGCAGACTGCGGGTTTTGGC 898105 28 100.0 33 ............................ TCTCCGCGGCGGAGCGCAGGTGGTCCTCCGCCT 898166 28 100.0 33 ............................ GGTACACGGGGCTACGGACGACTACCGGCAGGC 898227 27 89.3 33 G.......T........-.......... GTGGACGGCCGGGGCGATCGGCGTCGCCGCGCT 898287 27 92.9 0 G....-...................... | ========== ====== ====== ====== ============================ ================================= ================== 5 28 96.4 33 ATCGTCCCCGCGAGCGCGGGGGTGTTCC # Left flank : GCCGAGCGGACACCTCGCCAATCCCACAACGATCCGTCCAGCGAGCCAGGAGTGATCAGCATGACCGTCCACCACCGCGGCAGCCCCGCGCGCCGCGAGGCTCCGCCGCCGCTCCCTTCGCGGCTGAACGGCTGGGCGCGAGCCGGGGGGTGCTCAGGTGCATCGGCATGGGGCTTCCACTTCTCCCGTGGACGGCACCAGCGCGGCTCGTTGTGAGGCGGCGGACGGGGTGTCGGGCGGAGGACAGCAGGCCCCCTCGTCGGGGTTGCTTTCCGGTGGAACTCAGGCAGGCTGCCACGAAGGCGCCCATAGTCGCCTCGAAGGCCTGGTGTCCTGGCTAACGTCTGGCCATTGCCCCCTGAACTACGCTAACCGGCGGAGCCGTTCGCGCCCGGTGAACGGTCATGCAGGCAGCAGAGGCCCTGCGCGCCGAGATCGGTCCGTTTTTCCAACTGAATGAGATTGGGCGGTGCCTGGAGTAGAGTCGCAGGTCAGCAAGT # Right flank : CGGGTGTGGGGTTCGGCAAGGTCTACGGCGGGTGGGTCGTCCCCGCGAACACAGCGCACCAACCGCGCAAGTCGGCGAAGGCCCAACCGAACCCCCGCCACTCGAACCGGCCCCGCACCTCGCGGGGAAGGCCCGCACCGCCACCGGGCGTGCCACCGCGGCGTCGCGTACCTGGTGCGCGACCGCGTGACGGCACGAAACCGCTCAGCGAAGCTCAAGCCGCAACGGGGCGTTCGCACTGTCCAAGTGTTCAACCGTGGTGAAGATCAGCTCCGTCTCACCCGTGTTCTCGATGTCGTGGAGGAGGAATTCGCCGGGGCCGAAGGTGAAGTGGCGGGTTTCGCCGGCGTGGTAGGAGACGTCGCGGGTGGTGCCGTCGTGGGTGTGTTGGCGGCTGCGGCCGGGGGTGATGGCGGTCCAGAAGTAGTCGAGGACGTGGCGGTGGGCGTGCCAGCGGTCGCCGGGGGCGAGGCGGATCTCCCATACGCGTACGCGGGCGT # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGTCCCCGCGAGCGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 643826-643614 **** Predicted by CRISPRDetect 2.4 *** >NC_016111.1 Streptomyces cattleya NRRL 8057 = DSM 46488, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 643825 29 86.2 32 ..AC...A.........C........... ACGCGCTCGTGCGTGCGGGGCCGGGTGGCGAT 643764 29 96.6 32 G............................ GATCGCACGGGTGGCATGCGCCGCCCTCGGTT 643703 29 100.0 32 ............................. TCGACCTGGCGGAGTGGGACACACATACCCCA 643642 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 CGGGCTACCCCCGCGCTGGCGGGGACGAC # Left flank : TATGGAATTCCGCCTTCTTCCGCAGTCCCATTATGCGTCTGCCCCCAAGGCGGGGGACGGCGTACCGCGCTGACCCAGACGGCTTCGGACTGCTTCTTCGGCCAGTTTCCGGCCAGTCCCCGTCAACGTGTAGAAGCGGCGGGCTGGGCGCCCGGGGTGGGGGACGACTTCCTCTTGGCTGGCGATCCAGCCACGTTCTGTCAGCCGGTCGAGGATTGGGTAGACCGTGCCAGACCCGAGAGCGGCTTCCTCGCAGATGCGCAGGCCCCAGGCCGGGTCGTCGTCGGTCGACGCCAGAAGTACCTGGAGTACTTCAAGTGTCGGTCTGGTGAGGCGAATCGATGCCATGGCGGCAGTTAAGCACTAGGGTGAGCGTATGTCGAGGACGACATACGCGGGCAGGGTGGTGTTGCTGTGCCCCGAGCCAACCCTGACTTGCCGGGTTGCGATCTTGCGTTCGTGGGACCGACTGGGGACCGGCTCGGGGTGCGTACGCATGG # Right flank : ACTTGCTGACCTTGGATTCTACTCTGGGCGTCGCCCAGCGTCATTCAGTTGGGAAATCGGATCGACATCCCCGTGTAGTGCCCATGAAGGCTGCGGGGCTATTCGGAGGCAGCAGGACCGGTGGGCCATCCTCTGGGATGTGGGCTGACTGCCCTACGTGGTTGCTGCTTCGCCGCAGCTGCCGGACGCCGTCATAGCCAGTGAGGCGGGCTCTCAACTCGGGGCGCTCCGCTACGGTGAGGCACGGGAGGTGCGATGAAGCATGACGAGTATCACTGGGTGGTCACCCTGATGTGGGTGCAGGGGGACCAAACGCTACTCAGGGGGCGACAAGGGATCATCACGGTCCAGCGGCCCGGTACCACTCGGCAGGACCTCTTCCACGAGGTACTGGAGTACACCCGCACTACGGTAGGGGCGCCCGAGTCGGCTGGCGTGATCTTCTGGTCCCTCAAGCGGAACCGGTTGTAACAGTGCCCCGTCCGGCCGAAGTCGGGAGG # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGGGCTACCCCCGCGCTGGCGGGGACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //