Array 1 2247365-2246301 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP004353.1 Corynebacterium vitaeruminis DSM 20294 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2247364 28 100.0 33 ............................ CCGGGACCGAGCGCTACGCGACCGAGTTCATCG 2247303 28 96.4 33 ......A..................... CAGCATGTCCCACCACAGTCACAGGAAATGGTA 2247242 28 100.0 33 ............................ GTGCTGGCCCGCCCGTGTCGGCGACGTGCTGGA 2247181 28 100.0 33 ............................ CCCCCAGCGCGCCGGGAACGTCTACCTAGGTAT 2247120 28 96.4 33 ......A..................... CTCCACAACACCACTCCAATCTGGCTGCTTAAC 2247059 28 100.0 33 ............................ CCCTGGCGACCGGGTTCATGATGTATGCGAAGG 2246998 28 100.0 33 ............................ GCCGCCGCCGCCGAGTGAGGCAAGCCTCGACGC 2246937 28 100.0 33 ............................ CAGCACGAGGAAGTGGGCTACCACCACAAGGAG 2246876 28 100.0 33 ............................ TACCGACCCCTAGCCCGGCGCGCCCGCGCCTGG 2246815 28 100.0 33 ............................ TACCGTGCGGGCGATGAGGGACTTGATCTGCCC 2246754 28 100.0 33 ............................ CCATGGGTACGGCACTTGGAATGTGCGCATGGA 2246693 28 100.0 33 ............................ TTCGCCCAGGTCACCGGATTCTCTTACATCACG 2246632 28 100.0 33 ............................ TCGGCCCAGGGATCGGGAATTCGTTCTTGTCCC 2246571 28 96.4 33 .................A.......... CAGCTAGATTCACCCCCTACGCCTCCTCGCTTT 2246510 28 96.4 33 ........T................... CCGCGGCGCTGCGCGTCTGCAACGGCAGTCATG 2246449 27 96.4 33 ....................-....... CTCGACCTCCACGACCTACTCGGCATCGACATG 2246389 28 96.4 33 ........T................... CAAATGGGTTTGCAACCGTTACTCCAGGAGCAA 2246328 28 89.3 0 .............T......A..C.... | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.2 33 GTGCGCCCCGCACCTGCGGGGATGAGCC # Left flank : CTGGCGTAGTAAGTACTTGGGGCGATCTTGATGCCGGCGTCTTTGAGCACGCGGCAGATAGGCTCGACCCCGAAAGTGTTCTTGTACTGGGTGATGAAATCGACGATTACCGATAGGGGCGGTCGAGCTCCGCCGCGAAGAAAGCCGAGGCCTGCTTCAAAAAACTGTTGGCTCTGCGCAGTTCTGTGACTTCTCGTTCCAGTTCAGCGATGCGCTGAGAGTCAGCGGTGGTCGTGCCCAAAGCCGCGCCGCTATCGATGCGGGCTTGGTATACCCAGCCGCGGAGGGTTTCTTTGTTGATACCGAGCTGCTCAGCGATACGTCCGACTGCGCCGTTAGCGGTGGTGGGGTCTTCTTTGGCTTCGAAGACAAGGCGGACGGCGCGGTCGCGGAGCTCGTCGGGGTACTTCTTATTGGCGGGCATGGGATCTATCCTTCCGTGGTTTCGTACCCTCCATCAAACCCGGGAAGACTCACTTTCGTCCCGCCCAAGGCGCTAG # Right flank : CTCCACTTTGTGTCCAAATATGTTGTCCCGGCACCTGCGAGCACACTCCTTGTCGCCAGCACCATGGGCGTCAATCGCGAATGGGTTTTCCCGGGCCCTCAGGTGAACAGCATTTCCTCACCCGAACCAGCATTCTCCGCCGGAACCTTGATTCGCTACCGATAGGCGTCGACAAGCAACGCAAAAGGACGCCCGCGCAAAGCGGACGCCCTTTCTGAGCAGGTCTTTTTAGGCGGTGAGGTCCTTGAGGACGGCCTCAGCCGCGGCGCGCTGGACGGCCTCGGTGCCCTTGATGCAGGCTGCCTTCGTCTCGTACGCCTCGCCAACGGCGACGATCTCACCGTTGCCAGCCTTCAGGCGGAAGCGGTACTTGCCAGCCTTATCTTCGTACACTTCAAACTTTCCGGCCATCTTGTGTCCTTTCCGTACGAGCCAAGAATCGTTCACCACTCATTCTCCTACGGTTAACCGAAAAAGGGGAGGGTCACAGAAAACTGACA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2262140-2250210 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP004353.1 Corynebacterium vitaeruminis DSM 20294 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 2262139 28 100.0 33 ............................ CCACTGGCGACAACGGCAAAAATGGTGGCGAGA 2262078 28 100.0 33 ............................ CATGATCGACCCCTTGAGAGATGAGCCGGACTG 2262017 28 100.0 33 ............................ CCGGCCAATCCTGCGTGCTTCTGGTGTCGTACC 2261956 28 100.0 33 ............................ CACCAAATATGATCCATCAACGATCACATCGGA 2261895 28 100.0 33 ............................ TAGTCAACTGACAACCTTTAGAACTGCGCATAT 2261834 28 100.0 33 ............................ GTGATCCCGCTCTAACCGGGGACGGCACCGCTA 2261773 28 100.0 33 ............................ CCTCACTAGACTTCGCCACCGAGTCCAGCCTTG 2261712 28 100.0 33 ............................ GGTGCCGGACTGGTCGAAGCCGGTGGGGGCGTC 2261651 28 100.0 33 ............................ CTACAGGCCGAGCTTGACGGTCTGCAGGCCCCC 2261590 28 100.0 33 ............................ CACTATCCTGCCGACCTTGGTGAAATACCAGGT 2261529 28 100.0 33 ............................ GCCCTTCACCAGTAGGAACGGCTTGTTGTTTGA 2261468 28 100.0 33 ............................ CGGTTGTCCGCACCCAATCCCACGCGGCTGCGA 2261407 28 100.0 33 ............................ CGCGGGCACCGTTGCGCAGCGCGCCGGTTTCGA 2261346 28 100.0 33 ............................ CGCGTGCGCAGAACTTGATTCAGGCGGCGCTGG 2261285 28 100.0 33 ............................ GGAGCTTTCTAATGGCATCAACCATTAACTCTG 2261224 28 100.0 33 ............................ CTCCGCGCCCGCGGCGATGTTGTGGGTCTGGAG 2261163 28 100.0 33 ............................ GACGTGGAAAATGCGCGCAAATGCCGTCAGGAA 2261102 28 100.0 33 ............................ CCCTCATAGCACTCTCGTGCGCCCTCATGCTCA 2261041 28 100.0 33 ............................ GAAGACAACCACCTCCTAGAAAGCCCCTACGGC 2260980 28 100.0 33 ............................ CCTTGGCGGATGCGACGCCGAGGTAGACGGCGG 2260919 28 100.0 33 ............................ GAGGATTCCCCAATCGTCGACAAGATTCTGAAG 2260858 28 100.0 33 ............................ GACTTTTAAGGCGGTCAGCGCGGTGCTCGGTGG 2260797 28 100.0 33 ............................ TCCGGCCTTCATGTACTCAAAAATCGGATACAG 2260736 28 100.0 33 ............................ CACCCGACCCCATGACAGTCTTGATATCATCAC 2260675 28 100.0 33 ............................ TACCCATCCCATTACGGTGAATGATCTGGTACT 2260614 28 100.0 33 ............................ CGCACCTTGAAGGTCAGCGCGACCTCGGTCGAG 2260553 28 100.0 33 ............................ GCATTCTTGAGCCAGTCGAGCGTATTGCCGAAG 2260492 28 100.0 33 ............................ CCAGCGGCGGATACCGCCTGGCTGCGTTCCACG 2260431 28 100.0 33 ............................ GTCGATTCGCTTCCCCGGTGGCCCGCTGCATAA 2260370 28 100.0 33 ............................ TTCTCCTTATCGGCACGTGTTTTAAAACACACA 2260309 28 100.0 33 ............................ GCACGCCACCAGGAAACGCGACCCATGGTCCGA 2260248 28 100.0 33 ............................ CGGTGAGGAAGTGCAGCGACTCTTTTTCCGCAC 2260187 28 100.0 33 ............................ GGCGCAGGCCATAGCGACAGGGGCGGCCGCACT 2260126 28 100.0 33 ............................ CGAGTGGCTGGGGTGGACGGTTGAGAAGTCGCG 2260065 28 100.0 33 ............................ CGGGCACGAGAACGCTTTGCCACAGCCATGTTG 2260004 28 100.0 33 ............................ CGCCAAAAGCGCCGAATCCTGCGCCTCAACCTG 2259943 28 100.0 33 ............................ GGATACGCCGCATACGGTACGGGTCGACTACAA 2259882 28 100.0 33 ............................ TGTGGTGTATGAGGAGCGCATAGCAAGGCTCCG 2259821 28 100.0 33 ............................ CACGACGCGCCTACAGCGTCGCCGAAACCGCGG 2259760 28 100.0 33 ............................ CGTCTCCGCCGTGAGGCGGAGCCTACGAGGGCG 2259699 28 100.0 33 ............................ CTGTGCTTACCCCGGGATTGTCGGTCTCGAGCG 2259638 28 100.0 33 ............................ GTATGCGGGGGCGGTGATGGCGGGCATGATGTT 2259577 28 100.0 33 ............................ CTTCGCACGCGCACTCGCATCACGCTTCACCAC 2259516 28 100.0 33 ............................ GGACATCAAGAGCTTCGGTGGTAAGAAGCAGAT 2259455 28 100.0 33 ............................ CCCGCCGCGCATGTGGGCGTGGCTCTGCGCCCC 2259394 28 100.0 33 ............................ GGAAAGACTGTGACAATTGACACTATCAAGATC 2259333 28 100.0 33 ............................ CGCGTTCCGTGGTTCACTGGACGAGCTGCGGGC 2259272 28 100.0 33 ............................ TACATCAGGACAATGTTCGGGTATTACCTCGCC 2259211 28 100.0 33 ............................ CAACACGCTCCAGCACAAATTGTGGGGGCATGT 2259150 28 100.0 33 ............................ CTCCACCGTCGTCGGCTCCACCTCCGACACACG 2259089 28 100.0 33 ............................ GCCCAGGCGTACATCCAAGAACGCGAAAAGCAC 2259028 28 100.0 33 ............................ CCACGGTAAGCCAACCGCCAAAGGCAGGAAGTG 2258967 28 100.0 33 ............................ GTCCACGGCGACCTTCGAGGGCATGCTCGGCAA 2258906 28 100.0 33 ............................ GACACCATCTTGACCACCCAGGACGGGACATCC 2258845 28 100.0 33 ............................ GGAAATCAAGAAGATTTCCTCGAAGCGAAGCAA 2258784 28 100.0 33 ............................ CTCGACGGGAATTGCCGAGGTAAATATCCACGC 2258723 28 100.0 33 ............................ GGGTCGCGTTTGAAACGCGAACCCGTCAAACCG 2258662 28 100.0 33 ............................ GAACACTATGAGGCTCCTGCAGGCATTCCGCCA 2258601 28 100.0 33 ............................ CCGGTGACGGTCACGCCGGTCACACCGGCAGTG 2258540 28 100.0 33 ............................ GCCTTCGAGAGATTCGCGTATCCGATCGTCACA 2258479 28 100.0 33 ............................ GACCATCTTCTCGCGCGCCGTAATCGACAAGAA 2258418 28 100.0 33 ............................ TCATTCGGCTGCATCCTGACCAGTGTTTCCCCG 2258357 28 100.0 33 ............................ CGCCGTCTCCGTCCGCTCCGGCGAGTGGGTAGC 2258296 28 100.0 33 ............................ GCCCACGGGTGGAAAGAACTCCCACTGGTCAAG 2258235 28 100.0 33 ............................ CTCTAGGTGTAAGGAAAAAACACCACCCCAAGG 2258174 28 100.0 33 ............................ CGCCCGCCGCAAAGTAAGCCTTGATGCTCCGCC 2258113 28 100.0 33 ............................ CTGGTACACGTCACGGCCCGGGGTGTATCCCGG 2258052 28 100.0 33 ............................ GTTGGCGGCGGCGGTTTTTGATGTTGAGGTGAC 2257991 28 100.0 33 ............................ GAAGCCAACCTCCGAGAAATAAAGATCGGCGGC 2257930 28 100.0 33 ............................ CCGGCGGCAGTAGCCATATCTTAGCCTCCTAGA 2257869 28 100.0 36 ............................ CGGCGGCGGCGGCGGCGGATTCTCGCTCGGTGCTGC 2257805 28 100.0 33 ............................ CAAATCATCGTTGATGGCCTTCGTGAAAACCCC 2257744 28 100.0 33 ............................ CGGCTTGTTGTTTGAGAACTCAATAGTGCATAG 2257683 28 100.0 33 ............................ CAAGGCATTCCATTCGTGTGGCGTCCTCTGGTA 2257622 28 100.0 33 ............................ TTCCGAGCAGAAACTTCAGTAGGTCACTGGTGG 2257561 28 100.0 33 ............................ GAAGTTCTGCTGGGTTTGCCATGAAACCTAGTT 2257500 28 100.0 33 ............................ GTACCTTTGGATCAGCTCGAAGCACTCGTTGGA 2257439 28 100.0 33 ............................ GTACCTTTGGATCAGCTCGAAGCACTCGTTGGA 2257378 28 100.0 33 ............................ CCCTTCCGGCACAGGCTAAGAATCAAGTGAGGG 2257317 28 100.0 33 ............................ CGGCAGAACAATCGCGCAATGATCAGGATTTCA 2257256 28 100.0 33 ............................ CGCGCCCCACCCCCAGTCAGGAGCGAGGTCGTA 2257195 28 100.0 33 ............................ CCGTGGGTGGTCTACGATTTGCCGGAGGGGCCG 2257134 28 100.0 33 ............................ GTCCGCACCGTCTCGAAACGCTTCGAGGGTGGA 2257073 28 100.0 33 ............................ GCGATCCTGACAGGTCGGCTCGCGCACAAGCTC 2257012 28 100.0 33 ............................ GGTCACAAGCGAATACGGACTCCCAGCCCAGCT 2256951 28 100.0 33 ............................ CTGGTTCAAGGACATGTGCCAGTACGGGTTTTC 2256890 28 100.0 33 ............................ GCTCAAGCAGGAAGCTGCTGACAAGGCCCTCGA 2256829 28 100.0 34 ............................ CTGGAAGTGTAAATAAGAAAAGCCACCCCTCGGG 2256767 28 100.0 33 ............................ CACCGGCTACCGCGCCGATTCCGAGCGAGTTTT 2256706 28 100.0 33 ............................ ATCTCGCCGATCGTCGGAATGTCGTCGGGCTCG 2256645 28 100.0 33 ............................ GAAGCTGTCCGGGTTTTTCAATGAGATGGTCCC 2256584 28 100.0 34 ............................ ACGGTGCCCGACCACAAGCCCGAGCAGTCCCAGG 2256522 28 100.0 33 ............................ TCTCCACGGAGCTGTAGTGGGTGGGTGTGAGGA 2256461 28 100.0 33 ............................ GACCACCGCCGCGATCGACTACAACGACGATGG 2256400 28 100.0 34 ............................ ACCAGCACCAACCCCCAAGCGAGCCAAGAACGGG 2256338 28 100.0 33 ............................ CACATCTTGCTCAATGCGGTGGGTACTCGTCAT 2256277 28 100.0 33 ............................ CCAGGTCGCGTCATCTATTCCGAGGATGTTTTG 2256216 28 100.0 33 ............................ GTCACCACACCATGAATGACGAAGCAGTAAACG 2256155 28 100.0 33 ............................ GGACACGTCGCCCACCTCGGTAACCTGCGCATC 2256094 28 100.0 33 ............................ CTGACCAGACACACCCAGCAGCTTTAGATCCGC 2256033 28 100.0 33 ............................ GAAGACGGCAGAATCGGCGTGGAATTTCCTGCG 2255972 28 100.0 33 ............................ GAAACTCGCCGCCGTGATTGACCAGGATTTTGA 2255911 28 100.0 33 ............................ GGAAATGGCCACTAGTCCGGGCGGTTATTGGAC 2255850 28 100.0 33 ............................ TGGGGTGGGCGTGCTGGATGATGAGGTGTAGCC 2255789 28 100.0 33 ............................ TGATGTTTCGTGAGACCATCACGGATTTTCGCC 2255728 28 100.0 33 ............................ CCGGCGATCATGTTGGTGCGGGTGGCGGGGAGG 2255667 28 100.0 33 ............................ CATGGCTGTGAAGCGGATGGTGGATGATGGCCG 2255606 28 100.0 33 ............................ CGCGTTCCAGACCGCGGTCGATGGTATCGCGAA 2255545 28 100.0 34 ............................ AGAATGCTTCCAAAACGTCGATGGCTTCGAGGCC 2255483 28 100.0 33 ............................ CGGGGACAGGAAGGCTACGAAGCCCACCAAACA 2255422 28 100.0 33 ............................ CGGTGCGCGGCGGTGTCCCGCCCTTCAACGGGG 2255361 28 100.0 33 ............................ CGCGACCGGCTCCATGCAGGACACCTACACCGC 2255300 28 100.0 33 ............................ CTCCACAGTACGTCTCCGGTGTGATCACCTACG 2255239 28 100.0 33 ............................ CGCATGCACAAAATCGTGCAAATGCGCGTCATC 2255178 28 100.0 33 ............................ GTCACCTACAACGGCGTGGTGTACGAATCCACA 2255117 28 100.0 33 ............................ CACCGACCGCGTCGCCTCCGCAGACTGCTGCAA 2255056 28 100.0 33 ............................ CTTTGCGACACGAATGCGCAGCTCGGGAAGAAC 2254995 28 100.0 33 ............................ GGCGTGAACTTTCGACCGCGCTGGCTGAAAAAT 2254934 28 100.0 33 ............................ GTAACCACACCATGAATGACGAAGCAGTAAACG 2254873 28 100.0 33 ............................ CTGGCCAACCTACAGCAGCTTCCTCACCGACCT 2254812 28 100.0 33 ............................ CGCGATCAGCGCGGCGAGAATCCACAGCAGAAT 2254751 28 100.0 33 ............................ CGCCGTCTCCGTCCGCTCCGGCGAGTGGGTAGC 2254690 28 100.0 33 ............................ CTCGCTGCAGGGGCGCCTGGACTCGCTCAAGGG 2254629 28 100.0 33 ............................ CCTCCCCCCTGTTTGGTGGGAGGTTTTTTCATA 2254568 28 100.0 33 ............................ CTACCGTCCTACCTCGCCATGCTCGACATGGTT 2254507 28 100.0 33 ............................ TATCCCCGCGAATGGCGTGGCCGATCTCGTGAG 2254446 28 100.0 33 ............................ TCGGCGGAGCCTCAGGCGCACCAGGCGGATCCG 2254385 28 100.0 33 ............................ CAATGTTTGAGCACATTGCCCCATCGCTGAGGG 2254324 28 100.0 33 ............................ CTCCACGCCGCCCTGCTTGCGGCCCGGCATCTC 2254263 28 100.0 33 ............................ CGGGGCGGGGACACGTCAACCCGCTATCCGTTG 2254202 28 100.0 33 ............................ CAGTGGTTTGCTGAAGTACCACGCCGTTGACAA 2254141 28 100.0 33 ............................ GTCCCACGTCTTCTTTGGGGAGTCGCCGGTGAC 2254080 28 100.0 33 ............................ GGATGGGCGCTTCTCTGCTGGTCAGCGCGCTAA 2254019 28 100.0 33 ............................ CCGGAATCACCCGCGACGAGCTGGATAAGATGC 2253958 28 100.0 33 ............................ TCGCTGACCAACTCGGCTGCGGTGTCGGCACGG 2253897 28 100.0 33 ............................ CCGCCTTCTCGACCTGGGTGCACCAGGTGGCGA 2253836 28 100.0 33 ............................ GGCCGGCGATAGTGCTTTCCGTGCTCAGGCGAA 2253775 28 100.0 33 ............................ TAAGCACATCGCCGAAGCTGTTGACGGTCTTGA 2253714 28 100.0 33 ............................ CGTAACACTGTTTAATGTGGCGTTCTATTTAAC 2253653 28 100.0 33 ............................ CCCGGACAGCTTCGCACGAAGCATATCCGGGTC 2253592 28 100.0 33 ............................ CGTCCGCAAAAACCCCTACCGATAAGGATTCAA 2253531 28 100.0 33 ............................ CATCCTTCCAATCCGGGGATAAAAACTAGGTCA 2253470 28 100.0 33 ............................ TTGGCTCCGCCAGAATTTCGACATCCCTGAGGC 2253409 28 100.0 33 ............................ CCCATGAAAATAGTGGAAATCATGGCACCTATA 2253348 28 100.0 33 ............................ GTTCCGCCACCCATCCTCCCGTGCTCGGGAGAA 2253287 28 100.0 33 ............................ TCCGTAGTGCTGCCACTTGGCGAGGGGCAGGTC 2253226 28 100.0 33 ............................ GCTTCCGGGTTGTCGATGGATAACCTGAATGAG 2253165 28 100.0 33 ............................ CCGGGAATCTGACTGGTGGTGTTCTCGGCGAGA 2253104 28 100.0 33 ............................ CCTTTTGCAATAGCACCGCGTAGGGTATCAACA 2253043 28 100.0 33 ............................ GATTAATTACCTAAGGGTGCCGTTCTTGCCGTG 2252982 28 100.0 33 ............................ CGGCGGGGCCGAATGACACCGTGCTGAATACGG 2252921 28 100.0 33 ............................ GCGGCCCCAAATGATTGACAAGAACCTGCTGCT 2252860 28 100.0 33 ............................ CGCCCCGTAAGACTACTCGTAATAGCCATAAAA 2252799 28 100.0 33 ............................ TATGCAGGCGTCGGATGCGTCGGTGGCTGAGGC 2252738 28 100.0 33 ............................ GGACATGCGTGATGCTAATCGACTCGCCCAGGC 2252677 28 100.0 33 ............................ CCATTGACCATCACAGACGCGTCGACGACGGCG 2252616 28 100.0 33 ............................ GGAAAACAACCCCAAGAAGGGAACCCCAAATGA 2252555 28 100.0 32 ............................ CCCTGCCCCACCGTCGCGATCGGCGTCTTGAT 2252495 28 100.0 34 ............................ CCCAGAGTCTCCAGGTCGCACGGTGGAGGTGATG 2252433 28 100.0 33 ............................ GCCGCCCGCGTCCTCGACCACTACAAAACAAAG 2252372 28 100.0 33 ............................ GGCTGTAGCCCGGGAATATTGCATGCGCCACTA 2252311 28 100.0 33 ............................ CGATGATAATTACATCCCCTGGGCAGCCGGAAC 2252250 28 100.0 33 ............................ CATCGACGCAGCAGCATGCCGCAAATCATGCGG 2252189 28 100.0 33 ............................ CTCCAATGCTTGACATCATCCGCACCGATATCA 2252128 28 100.0 33 ............................ GTCGGCGTCGACGGTCGCTGGGAAGGTCGTGGT 2252067 28 100.0 33 ............................ GTAGCCGTTGCCGAAGGTTTTGCCCTGCTCCGC 2252006 28 100.0 33 ............................ GTTTGTCGCCAAAACCCGACCACTCGCCAATCT 2251945 28 100.0 33 ............................ GCAGCAGTCGGCTGCGGCGATTGAGGAAAAGCC 2251884 28 100.0 33 ............................ CTGCTGCCACGTCAGCATCAACAGTGTCGGCCA 2251823 28 100.0 33 ............................ GTCCAAGGCGCAGAACCTCGAACGCGATTTAGA 2251762 28 100.0 33 ............................ TCAGTTTGGGGCGCTCCTTTGGTTTTGTGTTTG 2251701 28 100.0 33 ............................ GGAACGCCCTGTGATCGTGCGTGAGGACGGCAG 2251640 28 100.0 33 ............................ CGAGCAGGGGGTAGGAGGTGCCGAGGTCAACCT 2251579 28 100.0 33 ............................ CCTCGTGGACGAGAAACGGCATCTGCACACGAT 2251518 28 100.0 33 ............................ TCCGTCCTCGTCGACCTGCCAGCGGTAGTCCGG 2251457 28 100.0 33 ............................ CTTGGGCCTAGAAAACCCGGGGTAAGCGCATCC 2251396 28 100.0 33 ............................ CTCAATACCGACTAGCCGATAAGTGGATTCTTT 2251335 28 100.0 33 ............................ CATCGCCCACCACCCCGAGCTCGGCCTGTGCTC 2251274 28 100.0 33 ............................ CCCCGGGGCACCAGTCGGCGGCTTCCTCAAGGG 2251213 28 100.0 33 ............................ CGCCTGCGAAGCAGCAGGGCAGGGAGAGCATGG 2251152 28 100.0 33 ............................ CACGATGGTCTTGTTGCCATCCGCGCCAGCATA 2251091 28 100.0 33 ............................ CGTCCACCAGCGCATAGGTGCGCGTCCCGTCCG 2251030 28 100.0 33 ............................ GCACGGTATCGGGCGATCGGGTGGCCTCGGCCT 2250969 28 100.0 33 ............................ TTACCGTCGCTGTCCTCATGGCCGACGGCCAGG 2250908 28 100.0 33 ............................ GCTATCAAGCCACACATGGACAGCCCCCAAGAC 2250847 28 96.4 33 ...T........................ GTCTGGCCGTTGAAATCGAACGGGATTCGACCC 2250786 28 100.0 33 ............................ CCGCCTGCTGCTGGGAAAACAGCGACCCATCGG 2250725 28 100.0 33 ............................ TGCTTGGGCAGGGCGCGGCCTATGCTGACGGCG 2250664 28 100.0 33 ............................ TGTCATCGCCTACAAGGAGGCGGCGCCCGCTTA 2250603 28 100.0 33 ............................ CGTGGCGACCTCCCACTCTGTAACTGTATTCGG 2250542 28 100.0 33 ............................ CGAGGGGATCGCGGACATGTCGCCGGTCTCGAC 2250481 28 96.4 33 .......T.................... CGCGGTCGGAGACCCCGCAGCACTCGGCCTGTC 2250420 28 100.0 33 ............................ TAACCGCCACGTCACCCTCCTGGGCCGTCAACG 2250359 28 100.0 33 ............................ CTATGTAACTCCCCAGTTCAGAGTTGGTTTTTG 2250298 28 100.0 33 ............................ TAGCCGATCGCGGACACCCACCCTCGTGGGCTG 2250237 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================== ================== 196 28 100.0 33 GTGCGCCCCGCACCTGCGGGGATGAGCC # Left flank : GCGGAACTGCGACTGTGGAGCGACCTTGAGACCGTTGCGAGCGGAATCAACTGGGAGGAAGAGTGACGCGATGATGGTCTTGGTCGTGACCGCCTGTCCAGCTGGCTTACGTGGCGACCTCACGAAATGGCTGATGGAGATATCGCCAGGCGTGTTCGTCGGGCGGCCTAGCGCCCGTGTTCGCGACGCGGTGTGGGAGCGGACCTGCGACCTTGTTCGCGACGGGCGCGCGATCCTCGTCCACAACGCGGCGAATGAGCAGGGCTTCGACTTCAAAGTGCACCGAAACGACTGGGTGCCGACGGACTTCGATGGCATCAAACTCATGATTCGCCCTGACAAGAGGCAGCGCACCGCGCGCCGGACCGGATGGAGCAAAGCTCGCAGGATGCGCTGACACTCGCAGCACCTCATGAACTCCAACCTGGCGAAGGTCATTTCGGAAAAGCAAGTTGCATGTAATAGCATGAAAACGGCTCCAAAAACGCACGTCAGCAAGA # Right flank : TCCACGGCAAAACTGTCAAGCCCCGGGTTTTTTGGAGGGTGTGTTATCTGGTTTTTGGGTTGGTTACGCCGCTGTTTGAACGGGGTTCAGACTGGCCCAGTAGGCGTTCTCGTACTCGACAGGACTGGTGTTGCCGAGCCGTGAGTGCAGGCGGTCATTGTTGTACCAGCCGACCCACGCAGCGGTCGCTTGCTCGACGTCACGAGCATGTCTAAACCCTGCGGGGTGCTGATCAATGTTGTGGATACATTCGCCCTTGTACAAACTGTTCACGGGTTCTGCAAGAGCATTATCGTAGGAATCTCCTTTCGACCCGACTGACGCAATGATCTGGTTCTCTTCCAAACGCTGCCCATAGGCAATCGCCCGGTACGAGGGTGTCAAGTTGTTTGTGTGTGGGGCTGATTTTTACATGTACTTGTCGAATCGGTCGGGGTAGGCCACAGCCATCTGGTTGATGGCGTGTTTCCATCCGGCAACCCGTCCACCTTCCACGAGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2282295-2284957 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP004353.1 Corynebacterium vitaeruminis DSM 20294 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 2282295 36 100.0 28 .................................... TGATCCAGGAAGGCCCGCTTGCGGACGT 2282359 36 100.0 28 .................................... CCGTCGCGGACCTTCTGCACGCCGACGA 2282423 36 100.0 28 .................................... GGGCATGAGGAGGATTGCGGGGGAGACT 2282487 36 100.0 28 .................................... CGGTGACCCACACCATGTACCGGTCATC 2282551 36 100.0 28 .................................... TAAACCTAGCGCGGGAGTAAAACTCCAC 2282615 36 100.0 28 .................................... AGCGCTTTCACAATGCGGGATTTCCTAC 2282679 36 100.0 28 .................................... TGCGCCTTGGTCGGTCAGTGCTAGGAGG 2282743 36 100.0 28 .................................... TGCCGGGGGTGCGGCACAGACTGATGGG 2282807 36 100.0 29 .................................... TGTCGTGGCTGTCAGTGTGTGGGCGGTTT 2282872 36 97.2 29 ..............................T..... ATTGACAGTGCTGGTCTTCTTGTGCTAGA 2282937 36 100.0 28 .................................... TGGTGAGCCACGACGGGATTTCTTGTTG 2283001 36 100.0 28 .................................... ATTCAGACCCATCAAAGTAGGCATGCTT 2283065 36 100.0 28 .................................... ATATCCAGCATCAGAAGCGCGCTCAACA 2283129 36 100.0 28 .................................... GAACGCGTGGACGGGATTCACTACCGGC 2283193 36 100.0 28 .................................... GCAATGGGGCTTGGGTGCGAACGCTTGT 2283257 36 100.0 28 .................................... CATGTGGCGGCGGCGTGTTCCTTGGTCG 2283321 36 100.0 28 .................................... TCGAGGAGATCACGGCCCTAGATCGTAA 2283385 36 100.0 28 .................................... CGCTAACCCCGTGGCGCACACCGAGCTA 2283449 36 100.0 28 .................................... GGTCTTTGGAATGCAAAAACCGCCGTGA 2283513 36 100.0 28 .................................... CCGGTATTCCTATATATGCAAAAAAGAA 2283577 36 100.0 28 .................................... TCATGCGCTGCATGAGCCATTCGTACCG 2283641 36 100.0 28 .................................... ATGGCTATTACCACCTTCATTCCGAAGC 2283705 36 100.0 28 .................................... CGCGTCAATACCTCCCTACTTAAGGCCG 2283769 36 100.0 29 .................................... TTGGCGCCGCGTGATGTTCCACCGCCTAC 2283834 36 100.0 28 .................................... GGTCATGGCATACCTAATGGATAAGCCA 2283898 36 100.0 28 .................................... GAATCAGCATGTCATTGAGGATCTCGTG 2283962 36 100.0 28 .................................... CGCTGCGACACCCACCAATGATCACCCG 2284026 36 100.0 28 .................................... TGCTAGGGATGCGGCTTTTGTTACGAGG 2284090 36 100.0 28 .................................... GTCCATTTTGCCCGAAGATAGCGAGCGC 2284154 36 100.0 29 .................................... CTGATTCATCTCACCAGTAGTCCCGGCCA 2284219 36 97.2 28 .........................G.......... GGGTGGGAAACAACAGCATGTTGCCCCG 2284283 36 100.0 28 .................................... CCTGTGGGCCTTTTTCACGAAGACCGAG 2284347 36 100.0 28 .................................... TGGGGGCGGCGACTGTTTCTAATACGGG 2284411 36 100.0 28 .................................... CTCTCAACCACATGCTCACCAGAGTTAT 2284475 36 100.0 28 .................................... GACATCCTCGCATCAGCTAGCTTCTTGG 2284539 36 100.0 28 .................................... CGAGTGGCTGGGATTGGGTGAAGACCCG 2284603 36 100.0 28 .................................... CGAATGATGCGAAGATTTGGTGTGTGTT 2284667 36 100.0 28 .................................... AGCGGGTGGGTGACGATGTTGTCTCCCG 2284731 36 97.2 28 ...........................G........ ACCCGCAGACGGTTAGCCGGTTCATGCT 2284795 36 100.0 28 .................................... AACCAAAAGGCGATGAGGACCGTTTGCC 2284859 36 100.0 28 .................................... AACCAGAAGGCGATGAGGACCGTTTGCC 2284923 35 97.2 0 .............................-...... | ========== ====== ====== ====== ==================================== ============================= ================== 42 36 99.7 28 GAAGTCTACCAGGGGTTTTATGAACTGAACCCCAGC # Left flank : GTTTTCTCGAGATGGAGAACCCGTTCCAACTGCTATGTCCAAGCTCGCCCAAAACTTTGGTCGATACGTGGAAGACGAGGTCGGGTCATTAGACGTTCCGATTTGGAAAGGCCCATTCGATGCCGAGAAGGGATAGTGAGCCAGTGTGGTGCGTTGTAATGTTTGACCTCCCGGTGAAGACCAAGGCGGAAAGAAAGGCTGCTACTCATTTCAGAAACTCGTTGTTAGACATCGGCTTCTGCATGGCTCAATACAGCGTCTACGTTCAGTTCCTTCCATTAGCTTCTCGTATTCACGCATTAGTAAAGAGCATCAAGCAGGATCTTCCACCAGGTGGCGACATCAGAATTCTTTCCGTCACTGACAACCAGTGGTCAAAAACCATTCGATTCTCAAATGCAAAACCGGAACAACCAGAAGACGCGCCTAGCCAATTGATGATTTTCTAGGACAAGAAACCCCTGATAACTCCAGCTTAGGCGGCCATTTTCGGGCACACT # Right flank : CTGGTTCGCATCGAGATACCCGACTAAAACTACTAGCGGAAATTCTCGCCAAAGAGTTAGGACATCTAGGTTTACCCGCTGAGGAAAACAGACGAAGTTGGGTTGTTGGCGCCGGTTCGAACAGGATTAGACTATTCCCCATGACCGAACCCGTAGCCCCCAAGAACGACCGCCTCGTCTGGATCGACCTCGAGATGACCGGCCTCGACATCCACCGCCACACCATCGTGGAGATCGCGGCCCTAGTCACCGACGCCGAGCTCAACATCCTCGGCGAGGGCGTGGACCTCGTGGTGCACGCCACCGACGAAGAGCTGGCGGAGATGGACGACTTCGTCACCACCATGCACACCACCTCGGGGCTCATCGACGAGATCAAGGCCTCCACGATCACGCTGAAGGAAGCCGAGGACGCGGTGCTCAAACTCATCGAGGAGCACTGCGACCCGGAGCACCCGGCGCCGCTCGCGGGCAACTCGATCGCCACCGACCGCTCCTTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTACCAGGGGTTTTATGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.10,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //