Array 1 787823-789706 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCUA01000007.1 Streptococcus oralis subsp. tigurinus strain RH_49702_11 s_oralis_RH_49702_11_ID_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 787823 36 100.0 30 .................................... TCAACTTACTCGTCTACGAAATCTGGGACA 787889 36 100.0 30 .................................... CAGTCCTTTGATAGCCCGCTTGCGCAGAAT 787955 36 100.0 30 .................................... TTATGACTGCGCGTTTGCTGTACGAGTTGC 788021 36 100.0 30 .................................... CAAGGTTGCAACCCCCAAGCATTTCAGAGT 788087 36 100.0 30 .................................... CGAATAAGTGTTTGTAAAGGTTTTCAAGCT 788153 36 100.0 30 .................................... CCTTTCCCAAAGTCAGTGACAACACAACCA 788219 36 100.0 30 .................................... ATTATGATGTGACTATCACTGCTAACTCTG 788285 36 100.0 30 .................................... TTTCAACTTTGTAAAATCAGTAAGTTGTAA 788351 36 100.0 30 .................................... TGTAATTCATTTCTTGCATCATCAATCTCC 788417 36 100.0 30 .................................... TACAACTAGATCAAGCGACACAGCGCTTGG 788483 36 100.0 30 .................................... TTTCTGTACAAGAACTTGTAGAGTCATTTA 788549 36 100.0 30 .................................... TGAAGGTCCTACGATCCTGGATGTCACTGT 788615 36 100.0 30 .................................... AGAGTATGGTTATACTCTTATTGTCATTGA 788681 36 100.0 30 .................................... GAATTTCACGTGCTAGACTATCTTGAAACT 788747 36 100.0 30 .................................... ACATAAACTGTTCCGTACTGCGTCGCAGCG 788813 36 100.0 30 .................................... GAACGTTCATATCTGCATGCTGGCTTATAC 788879 36 100.0 30 .................................... CAATCCGTGATCTAGACGATATCGAACGAA 788945 36 100.0 30 .................................... TTTATCAGCTTATCCAAGAAGATATGTTGA 789011 36 100.0 30 .................................... TTGCCCCGATGCGCTTGCTGCTTCCCTCGT 789077 36 100.0 30 .................................... GCGGAGAACTTGCAGACAACCCAAGTTTTG 789143 36 100.0 30 .................................... TTAGCAAAGAAAAACCTTCTTTGTTTATCA 789209 36 100.0 30 .................................... AAATTGTTGAGCCATCAAAAACACTGCTCC 789275 36 100.0 30 .................................... AAAATCAAATGGAGCATACGCAACTTACTT 789341 36 100.0 30 .................................... CCAATAACAATTCAGTAGAACCTCTTAGTC 789407 36 100.0 30 .................................... GTGTTAAACCAATTTTGTTTGTTAACTTTT 789473 36 100.0 30 .................................... AGGAAGCTCAGAAGATTATCGCAGATGCGA 789539 36 100.0 30 .................................... CTTGATAAGCAACCGTATATCTGGCAACTT 789605 36 100.0 30 .................................... ATCTTGGACATCGCAAGTTCCTGCGCTTAT 789671 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GATGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTTACTAATCATAATGATTCATTATATATTGTTTTGTTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCGCTAGAATTCATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTCCACATGAGTCTATCTGTAGAAGATCAAGTGGCATTAAAAATTTTGAATAATTTGTATCAGTATGAAATGAAAACAAAATTTCGTAGTGAATCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGGAATTTAAGAATTTATAATATTTTTGAGGGGAGCAAAAATCAAAATTGACGAATTTGAG # Right flank : CACCTCATGCTTGAAGATGGCCGATTGGCTGAAAAAGAAAGTTTCAACATCGAGCCTGACGGATTGATCACTACAAAATAATTTTTTAAAAATAGAAAGGAAATTTTCTAAAATATTGTTCGAATTGTAACCGCAGGCTCAGGCTTGCGGGCTTTTTTGTTTGCAATAATAAAAGCAGTGACGGAAATCACTGCTTATCAGCTGTAGCAAATTCATAAAGTTTTTCTGCTGTGAGAAGTGCCATTTTGTCCATGCTTGTTTTTCCTTTTCTGAGGTCAGAAACGGTAGTCCATGGCACACCGGCACCTTGTGAAATAGCAGATGTAGAAATAGAACTATTAAGTAATTCTTGAATAATTTTTCTCATATTTTTCTTTACCTCAATTTTTATCTTAATCATATTATATAACGGAGAACCGAGATGTCAAGTGTTTTGATAAATTATTTCTAATTCTAAGATGAAATAGATAAAACCCGCTCAGTTGAGCGGGTTTCGTCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //