Array 1 1497159-1491888 **** Predicted by CRISPRDetect 2.4 *** >NC_015474.1 Pyrococcus sp. NA2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 1497158 30 100.0 37 .............................. GGAACGCAAGGAGAAATACATAGCGGAGATGGATGAG 1497091 30 100.0 37 .............................. TGGGACGAATTGCCAGTTCTAGCGAAGGCTTACATCA 1497024 30 100.0 37 .............................. GGCTGGTACATCACTGTGTACGTTGAACGGAGCTCTA 1496957 30 100.0 39 .............................. AATGTGCATCGCTAATGGAGTGCTTACTATCAAGAGCAG 1496888 30 100.0 38 .............................. CTCTACGAATTTTTCAAACTCTTCTTCTGTCGCATCGT 1496820 30 100.0 37 .............................. TTGATATCTTGTAAACTTCTGCGAGGAATTGTTGTAG 1496753 30 100.0 37 .............................. GAGGATGCTAAGGTATTGCAAGAGTTCATCGGCTACA 1496686 30 100.0 36 .............................. AGGAGTTACCGAGAAACGTTGTCTATGTTGTCTACG 1496620 30 100.0 37 .............................. GGGTCAAATGGGCGTTGGACAACATGTATAGCGTCAT 1496553 30 100.0 38 .............................. AGCCATGTGCCTCCTAGACCCATTGCGACCTTCTCTGG 1496485 30 100.0 37 .............................. AGTAGTGCCCCAGTTTCTTGTTCTTCCTCATTTATCT 1496418 30 100.0 38 .............................. TGTATAAGGGTAGTATTGTCTGTATCATTTGTAGTTTC 1496350 30 100.0 36 .............................. GGGAAAGGCCCTCGACGACTTCACGCCTGCGGACGT 1496284 30 100.0 37 .............................. CAGTTTTACCTTCTCTTTTAGGTTTAGCAACTTAATA 1496217 30 100.0 36 .............................. GTTTCTGGCAGAGTACACCGTGGAGGTGGCCCTTTT 1496151 30 100.0 39 .............................. CGGCACTGGTCAGAGCCAATAGCGCGTGGCTACTTCAAC 1496082 30 100.0 36 .............................. CTGGGTTTCAAGATACCAGAAGGCGGCCACGAGTGG 1496016 30 100.0 37 .............................. TGTCCCAGCCGTCGAAGTTGTTTGCGTCGAGCACTAT 1495949 30 100.0 36 .............................. TACAATTTCATAGGTGTACTTGGCTATGTGGAAGGA 1495883 30 100.0 37 .............................. TCACATACAACAAAGTTCACGTATATGGTTGCCCTCC 1495816 30 100.0 37 .............................. GAAGAGGGTTTCAAGGGGGATATACGAGATCGCCGAG 1495749 30 100.0 43 .............................. GCTTTTCTCAGCCAAAACAGGCACGGGAGCACTTTTCCGCCGA 1495676 30 100.0 36 .............................. TTAGGGAGGTTCTGAACTACGCCGACAGGAGGGCAG 1495610 30 100.0 35 .............................. CGTTCCGCGTTGGCGTCAAGTATGCGGACAGCGTG 1495545 30 100.0 38 .............................. ATGAGCAAAGCGATGTTCTCGTCCCCCGCATACGGCAC 1495477 30 100.0 38 .............................. TGAGGTTCAGGAACACCGCCTTCATACTACCACCATCC 1495409 30 100.0 39 .............................. AAGGTAGAGCATAGTGCCTTATCCTTGGTGATCGCGTTG 1495340 30 100.0 41 .............................. AAGGAATAGAGGTTGTTGTGGAGGATGTAAGCAGAGTTATA 1495269 30 100.0 37 .............................. AACTTTTTCTACCTCCTCACTCTCCATTTCCTAACCA 1495202 30 100.0 36 .............................. CCTCATAGATAAACTCGATAAAGACTATCGTGTCTA 1495136 30 100.0 37 .............................. CTACAAGGAAATAAGCTACATATGGAGCAAAGAAGGA 1495069 30 100.0 37 .............................. CTTAATCCGTTTAGAGACAAAGTTCGAAGCTCTCATA 1495002 30 100.0 37 .............................. AAAGGCAACGAAACAGAGTTTACAATCTACAAAAAAG 1494935 30 100.0 37 .............................. AGCACCGAGTTCCCCGAGTTCGACGCCTTCTACAACG 1494868 30 100.0 38 .............................. GTACGGTAACTTATTCCCATTAACGTCATAAAACCTCA 1494800 30 100.0 37 .............................. TGCTCCCTGCCTGTATCCCGTTCCACATGAATTCGAT 1494733 30 100.0 37 .............................. GCAACGAAAAGCTCAAGGAGTCGACGTATGCTTTTCT 1494666 30 100.0 37 .............................. TGGACGACCCTGCCTGGTGGGAGCCCCTGAAGGCCCT 1494599 30 100.0 40 .............................. CGCTGACGACGACAGGTATGTAGACGGCGTCGACGACCGA 1494529 30 100.0 34 .............................. GCACCAGATAACGCTGAAGTACTACGCCGAGCTC 1494465 30 100.0 36 .............................. GCTTATCTGTGGCGGGAACTTCAGGTAGAGCTCGAA 1494399 30 100.0 38 .............................. TAATCGTTCTTAAATAGCTCTAGACCTCCCCAAATCTC 1494331 30 100.0 36 .............................. GCACCAGCAGGGTGTAGACGCCGGCCATCAGCTTCG 1494265 30 100.0 37 .............................. TCAAATCGTCAAACTCAAAGTTCCTCTTGTCGCCCAC 1494198 30 100.0 38 .............................. GGTCATTGGGGCTAGGCCGGGCCTTTGCCCCGGCCTAG 1494130 30 100.0 40 .............................. GAATACCGATGACTTGTTGAGCTTCAGATTCAGAAGTCTT 1494060 30 100.0 36 .............................. ATCGTCTTGGGAAGTGCATCATTCAACAAGGGAACG 1493994 30 100.0 36 .............................. GGGTAGATGGTATTCTCGAGGATCTTATAAAAGCTT 1493928 30 100.0 37 .............................. TCGGTGGTGTTCGGTGGTAACGGCATGCTCTTCACGT 1493861 30 100.0 36 .............................. CAACGTCTTTTTCTCTCCAGCCCTTGCTTAGCAACT 1493795 30 100.0 35 .............................. ATTGCACGTCCGTGTCCGGGATCACGAGCTGGCCC 1493730 30 100.0 38 .............................. GGGAGGTCAGTATAATTGCGTCCCTGGGGACAATTACC 1493662 30 100.0 37 .............................. TCCGGGCTCCTCAGCCACTCTAGGAACTTCACCGCCG 1493595 30 100.0 36 .............................. AGGTTTTGATTTTCAAGATTTTAGTTTTGGGGTCCA 1493529 30 100.0 37 .............................. TTGAGGGCGTGAAGAAAAACGCCAGCAACCCAGGGAC 1493462 30 100.0 36 .............................. TCAACAGCAACTGGGAGACCTTGGCCGAGGGCTCCC 1493396 30 100.0 36 .............................. CTTTCACTACAAAGTTCACATAGATTTTCCCAACCT 1493330 30 100.0 37 .............................. CCTCGTCATCGGGGAGGAGATGGAGGTAGTCCACCTG 1493263 30 100.0 36 .............................. AGAGTCAAGGAACGATCTTGCCGCTGGATAAATCTC 1493197 30 100.0 36 .............................. TTTGGATCACCGTACATGTTTTTCAACAGCGAATAC 1493131 30 100.0 37 .............................. CTCCCATCACCCACTCGACAAACCTTTCAAACTCCTC 1493064 30 100.0 36 .............................. GCACGGGGTCATCGACGAACATCCTCTCCTCCCAGT 1492998 30 100.0 36 .............................. AGGAGTAGCCCGAGCAGGAGGATCGGGCTCATGCCC 1492932 30 100.0 37 .............................. GTACTTCACGGCGGTCTTGGCAAAGGCCAGCCACGTC 1492865 30 100.0 37 .............................. AGACCACGACCTTCCCCTCCTTGAAGGGGCCGATTGG 1492798 30 100.0 38 .............................. CTGACCGGCTCCCTCACGACGAGCATCCACCAGTCCAC 1492730 30 100.0 37 .............................. CACGGTGACCGCCACTACAACGTCCGACGCCTCCGAG 1492663 30 100.0 38 .............................. TGCAAGATCTGGAGCCTGCCCAACCCGCCGAACGCCCG 1492595 30 100.0 36 .............................. TATACAGTCTATTGATTCTTTTGTCTTGCTCGTCAT 1492529 30 100.0 38 .............................. TGGGGATATACTCCCGGCCGGCATTGAATTAGCCAAGA 1492461 30 100.0 37 .............................. GTACCCCTGGAACGCCGTCCACGGGACTATGTTCAGC 1492394 30 100.0 37 .............................. ATAACGGCAATGGACAAGAACAGGGGTTTTGTAGTGG 1492327 30 100.0 37 .............................. CAGGCAAAAAAGTAACCGTCCCACTAACATTTTCCCT 1492260 30 96.7 37 ..C........................... AATTTGGGCGGGGGAGGCGGCGGGTGCGGGAGGGTTG 1492193 30 100.0 45 .............................. TGAGCGCGCTGTCGAGCTGGCCCGTCGCGAGCCTCAGCGCGTAAA 1492118 30 96.7 37 ..................T........... CTGAAACTGTTATAACATCATTCTGGAGCACAATAGG 1492051 30 100.0 36 .............................. TTGGCGGTAGGGGGGCAATCACCCCCCTACCCTCCA 1491985 30 96.7 38 ..................T........... CGGCCTCAGCTGGGGCCTCCCTGAGGACGAGGAACCCC 1491917 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================= ================== 79 30 99.9 37 GTTCCAATAAGACTAAAAGAGAATTGAAAG # Left flank : CCCGGCCACCGCACCATAACTTCTTTCGAAAATTTTTAGAAACCTAATTAAAATCCATTATTCCGAGTATTAACCCTCCTCATGCCCCCAACATTCAAAATATCCCCCCACGCTGATTATGGTTCGTTTAGTAATCAATTGTTAATAAATTACATGTCACCACAATTATCCCACGAAAATGTAACGAATTATTTTCAAAATCTTTAAAATTTTGATTTTGAGCCGCCATTTTAGCTTTTAAATGTAGCCAGCATGCCATCCTTTAAATTTAAACTTAAGGAATCTAAATTTCAGGATTTAAATTATCAAAAACCATAGAGCTTGAATTTAAGGGTTCCTAAATTTAAGATTTGAATGCCCTATTCAACAAACAAAGTGTTCATAGAAACTTTCCGAGTTAAGATATTTTTCCTTAAGCAGAGGGCTCCAATACCAGAAAAGCTTATAAAATTAGAGTAATGTAATTCCTCTATAGGAGAAATAGAGCAAAAATCGCGCCT # Right flank : ACATTAGCAGGGGTCTACATCAAAAGCAAATTCAGCAGGCTGAAAACTAAATTTCTCTATTGAGACCAACATAAGTTTTAAAAAGAGAAAAATTTACTCCAGTGAAACCTCGTTCTCCCATAAACCATGGATGTTACAGTAACTTAAGGCCTGAAGCTTACCCTTCTTGCTGGTCTTGAAGAAGAATATCGCTTTGGGTTCAGTTAAGGGATCTGTATGGTTCGTAAATTCCACCCTACCAACTAATATTGGGAACTGACCATCCTCTGGATAAAAGTATAGCTCGATCCATGCTATGTGATGCTCAGGTGTGTTTGGGTGAGGAATTTCTTTTCCAACGCTTACCTCAACCTTGACTAAATCTCCCTCCTTCTCGTACTCTATAACAGGCACGTGCTTTTCTCCTTTCCAATCTCCACTCCTTATCGTGTCCTTCAACATCTCCACCACCTCAGCTCAAATCTATTCTATTTTCTCGAACATGTCCTTTGGGGCTCCAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTAAAAGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: R [matched GTTCCAATAAGACTAAAATAGAATTGAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : III-B [Matched known repeat from this family], // Array 2 1693860-1688112 **** Predicted by CRISPRDetect 2.4 *** >NC_015474.1 Pyrococcus sp. NA2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1693859 30 100.0 37 .............................. CACTTATGTCCTCGTATATACCTATGTATAAACTCCT 1693792 30 100.0 43 .............................. GTAGGATTGCTCAAAGTTGCCATATTTTACGGTAGATGGACAA 1693719 30 100.0 37 .............................. GGGAGTATCAACAGAAATTGGAGCTATACAAGAAGGG 1693652 30 100.0 37 .............................. ACCGAAACACTTAAATATGAGTAACGCATAAGTAAAA 1693585 30 100.0 37 .............................. GAACTCCTCGTCCCTCATGAGCCTGACGACCCAGCGC 1693518 30 100.0 38 .............................. CTTGTGTATTCCCCTCTCAAAATCAAAATAGCCTTTGG 1693450 30 100.0 37 .............................. GTTTTCTTTTCTTATAACTTCATCAGCTCTTCTGAAA 1693383 30 100.0 37 .............................. TCTTAGTCCCTCAACTGCCCACTTCAGAACGTAGGAT 1693316 30 100.0 38 .............................. CAATCTCCAGCTCGAATTCTTTTGTCGAACTCGGCTCA 1693248 30 100.0 37 .............................. ACATGCCGCGGTTTTGCGTGACCCCCACCTTGGTTGT 1693181 30 100.0 37 .............................. CTGGTTGGAGCCTTATCGCTTCCGCTAATGTTTCTCA 1693114 30 100.0 36 .............................. AAGCCTTCTGCAACGTCGAACTCAATTGGATTATTG 1693048 30 100.0 38 .............................. CAATGGCGCAACATCACTATCAATCTCACCCGTCTCCA 1692980 30 100.0 37 .............................. TGGAGTGGAAAATAGACTTCGTCGAGAAACTAAAGTA 1692913 30 100.0 37 .............................. GGAAGAAAACCAGTCCCAGGGAGAAACAAAGGAAGGT 1692846 30 100.0 39 .............................. GGGAACCCCAACCCATGAATTCTGCTTCATATGCTAACT 1692777 30 100.0 39 .............................. CTCAGTTTTGGAACTTGTTGGGGAGGTTGACAATTGGGG 1692708 30 100.0 38 .............................. ACAATAGACGACACCCAGGCTTTCTTCCGCCGTTGGAG 1692640 30 100.0 37 .............................. AACTACCTCTCAGTGATACAATTGCCAGTAGAATGGA 1692573 30 100.0 38 .............................. CTGGTATTTTTCGGAAAAACGTCAAAAGAAGAGCGGAG 1692505 30 100.0 36 .............................. TGCGGTCTCTAGCCTTTTCTCAATTTCTCTTATCAA 1692439 30 100.0 36 .............................. GCGGTCAAGTCGACCCTCGACTGGTGGTTGAAATGG 1692373 30 100.0 37 .............................. CTGGTCGGTCGAGACGTACATCCTGTCAAGGACTTCC 1692306 30 100.0 37 .............................. TTCTTATGAACTTCAACAGGCTTAGATGGAGCATCAA 1692239 30 100.0 38 .............................. GAGATTACCGTAGCTGCTGGGTAAGCTGGTTTAGCTAT 1692171 30 100.0 36 .............................. AACCCACAAACTATGAAGCCTTTTATGGCATACCAG 1692105 30 100.0 38 .............................. TTTGTCCAGCATTTTCTCTATTTTCTCAACAGCATCAT 1692037 30 100.0 36 .............................. ACGGCTCCGACAGACATAAAGGCAGACAAGGATGTT 1691971 30 100.0 36 .............................. TCGCTCTCGCTCACTGCACTACTGTTCCCATAATAC 1691905 30 100.0 38 .............................. ATTTCTAGAAAAAGAGAAAGCAACTAACAAGATCGGAG 1691837 30 100.0 38 .............................. TCTCTTTTCTCTACAAACTTAATGAATTCGCTTAGGGG 1691769 30 100.0 37 .............................. AAAGCTTAATCGCTTCCTCAATAACCTTCCACTTAGA 1691702 30 100.0 38 .............................. GTCTACGCCGAACATGTCCTTGGCCATCTCGACCTGCT 1691634 30 100.0 36 .............................. TGATCTTCGAGGTGGTGGTATGAGGGTCAGGCTCAG 1691568 30 100.0 36 .............................. GACGGCGAGCGTCGTGACCGGCAAGGCCACGCAGGT 1691502 30 100.0 37 .............................. CGGCATCTAACCCGACCTCCTTCACGACCCTCTTGGC 1691435 30 100.0 37 .............................. TTGAGGAAAACCACGATACGGTCTTGGCTTTCGCCAC 1691368 30 100.0 37 .............................. CATCGTAGAACCTCAAATCTGCCCCACGCCTTGACCA 1691301 30 100.0 36 .............................. TCATTACGGCGTGAGCTTCTCTCTCGTCTAAAAGAT 1691235 30 100.0 39 .............................. AATCTCGTCGAAAGTAATTGGCAGGGTGGTTAGGTTGAG 1691166 30 100.0 38 .............................. TAGGCTTCAGGAGAGGGGGGACATCCTCGTATTCAACG 1691098 30 100.0 37 .............................. ATCTCATTCGTATCTTATCGAAAAACGCATCTTAGAG 1691031 30 100.0 38 .............................. GATCTTGTCGTATATTGTCGGGTGTAGCTCCCAAGTGA 1690963 30 100.0 37 .............................. TTTTTGGGGGTGGTTGCTTTTGTGTGTCCACACTTAC 1690896 30 100.0 37 .............................. CAAAACCTTTACAATCTTCACTCCTCATCCTCTCCAG 1690829 30 100.0 37 .............................. TTTTTTTATATTTTAAAAGAGTTGGAAGGTGGTGAAA 1690762 30 100.0 36 .............................. TCTTCTCGCTGTATCCCTGTTCCAAGAGCCATTGCC 1690696 30 100.0 38 .............................. ACCACAGCTCTACACTTCTGATGAAGAGCTTGTTTCAA 1690628 30 100.0 38 .............................. AGCATTATGTACCCTTCACCATTTCTCCAGCTGACTGC 1690560 30 100.0 37 .............................. TGATTTTGTGGCTCGACAGCCTCGAGGAGGGGGGTGA 1690493 30 100.0 37 .............................. GATATACGGCTCCTACGCCCTGATCAGGATAGAGGCG 1690426 30 100.0 37 .............................. AGCAAGTAGATAACAGAAAAATTTTCGAAATTGGAAG 1690359 30 100.0 36 .............................. TTTTACAGATATCTAGCCTACAAGGTTCTGAAAAAA 1690293 30 100.0 39 .............................. GAAGTTGAGATCGAGGAGGGAGAGGAATGAACGTTGTGA 1690224 30 100.0 37 .............................. GCAAAAAAATAATGAAATCAGGTTCAGAACCTGCTCT 1690157 30 100.0 37 .............................. ATCCTTGGCGCCGGCCCCCGGGCCGGGCTCACACCGG 1690090 30 100.0 37 .............................. TCACGTACATCCCGTGCCTCTTTGCGATGTACTTTAT 1690023 30 100.0 39 .............................. TTGCCACCAGACGTAAGAGATAAAGAAAAAAACATCTCG 1689954 30 100.0 38 .............................. TCAAGCTTGAGCACAACCTCATAACGAGTAACACGCAC 1689886 30 100.0 37 .............................. CACACAGGGCAAACCCAAAACCCATCTTTGAATTCAG 1689819 30 100.0 36 .............................. ACTTTTCTAGAATCAGTTCTATATTCTTCTTGACGT 1689753 30 100.0 37 .............................. TAAAATTTCTGATAAACTGCCATCCCCTGCTTCCCCT 1689686 30 100.0 37 .............................. AACCTCAAACGCAATATTGGAGCTATAGAAGATTTTC 1689619 30 100.0 38 .............................. GCAATACTAAGAGCCCCCCCTTCTCAGGCCATAGCGTC 1689551 30 100.0 37 .............................. AAAGATTGAGCGTAAGGGTGAGGATGGTAGTAAGAGG 1689484 30 100.0 37 .............................. AGGCTAAGGCTGAGGCTATGCTCTCTAAGGATAACCT 1689417 30 100.0 36 .............................. AAATTCTTCATGAGCCTCCCAACAGACGAAGATAGA 1689351 30 100.0 36 .............................. CTATTTGGTCTTCGTTGAGGATTATCGGCTTAATCT 1689285 30 100.0 38 .............................. AACGAGGCGTTGAGGGATTACGGGAACATCGAAAAGCT 1689217 30 100.0 37 .............................. GTTGTTGCGTCGGATGTGTTGGTTAGTCTCTGTAGAA 1689150 30 100.0 37 .............................. GTACTGGGCGAAGATGTAGGTCAGGACGCTCTCGTAG 1689083 30 100.0 36 .............................. ACTGTCCCCTCACCCGGCTTTTCGCCGGGCTCATGG 1689017 30 100.0 39 .............................. GTCTTCTTCAAACTGCTCAGCAGGGAGGAAGTGGTCTAC 1688948 30 100.0 36 .............................. TCACCCACACGACGGCCTTCCCGTTCGCCGAGTCCC 1688882 30 100.0 40 .............................. GAACGTGAACAGCTCGCTCTTCGGCGAGGGGCTGTCGTAG 1688812 30 100.0 38 .............................. TTATGTTGACGGAATTGCTGACGTAGGTCATTGCCTAC 1688744 30 100.0 37 .............................. CACACGCCTGTTGACGGTGCATTGGGCGTGGCAGTTA 1688677 30 100.0 36 .............................. GCGTTACGTACACCTTGAACTTCGACTTCGGGTAAA 1688611 30 100.0 37 .............................. ATACGCTAACTCGATAGCCCTCATGAGTTCATCATCA 1688544 30 100.0 37 .............................. CGTTAAGAGCAGAATAGATAAAAACAGAGGTTACCGC 1688477 30 100.0 38 .............................. TATGTCGTCAGGTATATAGCTAGGATCAACTACATAAA 1688409 30 100.0 38 .............................. TGCTAGTCATCTCACCTCACCTTACCCTCTTGAATACT 1688341 30 96.7 37 .........................T.... TAAACATCCAGACCTTGCGCCCTTTGGGCGTTAACCC 1688274 30 100.0 37 .............................. CGGTCATGTACACTAAGTTGAGCGATGGGAGCTATTA 1688207 30 100.0 36 .............................. AGGGTTTTTCCAACCCTCCTCGGCCCGACGACGAAG 1688141 30 96.7 0 .............C................ | ========== ====== ====== ====== ============================== =========================================== ================== 86 30 99.9 37 GTTCCAATAAGACTAAAATAGAATTGAAAG # Left flank : CAACAATTATGTACATAACAATCACCGAAGATTATTCGATCCCCAACGATATAACGCTTTTGGAGTTTTAAAGCCTCTCTAAGGTCTAAATCTTTAAAAGGGGTGATAACTGTGGATATGGCATGTTTAGTAATCAAAAGTTATTAAATTACATGGGGTTATAAGTGAGGGAAATTGATATTACGAATAATTTTCGAAAATTGATAAGTTTTGTTTAGATGCTCGCTATAATAAAACAAGTTGATGAATTCACACCAATTGCACTGTAGTGTCAGTAAAGTTTCTCAGATTACAATACAAAGGTGTCAGATACGATGGTGTTGGAAAATGAGCATTTTAAAAGATGTCGTTGTATTTGGGGGTTGGGCAAAATAACGTCATTTGGAGGTTGTATAAGAGCTCACCAATATTAAATGGGGGAAACCATCGATATCCAAAAAGCTTATAAAATTGGAGTAATGTAATTCCTCTATAGAGAAAATAGAGCAAAAATCGCGCCT # Right flank : AATTATCAAAAATAGAGGGCTTTAGAGCTTTAATGTTATCCCGATTACATCGACTTTGCTCTCCTCATCGAGCTAGGACGAGGAGGTTTGTTTGGTTTTTAGCTATAATTTACAATACTTGGTAAGCTTAAGCTATAGCTTTTGACGAAAATACTTTTTAATTCTAAGAAAGGGTTTTAAGTCCAAGTTATTAATCATTCTTGATGGTGAGATTCCAACTTAAAACTAAGTTATCATTTCATGACATAATTATAGTTATTATGGCTCTAGTCTACACAATAATCATGATTTACTTAAGTTTTATTAAATTCACGTACTTTCGCTACTCCAGCTTCGATCTTGGCATCTTTACTCAATCGCTTGCAAGCTTTATTCATGGTAGGTTTTTCTTCAATACACTTGAATGGCAGTTTCATAGTGCCCCTAATCACTTTGCCGTTCACTTTCAGCCGATACTTTTCCTTCTAGTGCCTATTTTCAAGTTCTTTCCATCTCCTAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTAAAATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTCCAATAAGACTAAAATAGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : III-B [Matched known repeat from this family], //