Array 1 30536-31845 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADDNM010000014.1 Escherichia coli strain 18FS16-3 scaf10_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30536 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 30597 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 30658 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 30719 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 30780 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 30841 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 30902 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 30963 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 31024 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 31085 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 31146 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 31207 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 31268 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 31329 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 31390 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 31451 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 31512 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 31573 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 31634 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 31695 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 31756 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 31817 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //