Array 1 139303-142198 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMUL01000013.1 Streptomyces termitum strain JCM 4518 sequence13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 139303 29 100.0 32 ............................. ATGGAGGCGGCGAGCGCGTCGGTCGTGCGGAT 139364 29 100.0 32 ............................. TTCGCAGACAGGGTGAGGACCTGGGCCGAGCC 139425 29 100.0 32 ............................. GACTACGCCGGCCGCATCGACGCGGCGCACAA 139486 29 100.0 32 ............................. GGCGGCGTACGAGCCGGCGAATCCGATCCCGG 139547 29 100.0 32 ............................. GGGGGATGGAAGGGCCCCGTGCTGGGGGTCGT 139608 29 100.0 32 ............................. TCCACGCCCTCGACATCGCGTCCGGTCAGAGG 139669 29 100.0 32 ............................. CGCTGATGCTGCCGCTGGAGGCGATCGAGCTG 139730 29 100.0 32 ............................. TCCGCTTCCCGCAGTTTCACGGGATTCGGTTC 139791 29 100.0 32 ............................. GCCGCTGCGGCGCCTGGCGGACACCGCCGGTC 139852 29 100.0 32 ............................. TGCACGCGTTCATGGCGGCCGCCGGCTTCCAG 139913 29 100.0 32 ............................. CGGTTCCAGGTGGCGGCCGGCGGTGATGCTCG 139974 29 100.0 32 ............................. GACTCGCCTACACCCTCGCCGCGCCCGTGCTG 140035 29 100.0 32 ............................. TGGCCAAAGGCCATGTGGTGTCGAAAGACGGC 140096 29 100.0 32 ............................. CTGTACGAGTCCGCCGGGGCGCCGCCCTTGGA 140157 29 100.0 32 ............................. TGCTGATCGACGACGCCAAGCAGGCCGTCGCC 140218 29 100.0 32 ............................. TTCATCAACGCGGAGAAGTCCGGGGACGGGGG 140279 29 100.0 32 ............................. GCTCTCCTGCGCGTCGACGGCGAGCAGCCGTT 140340 29 100.0 32 ............................. GCGTACTTCGACAGGTTGCCCTCGCCTCGCTG 140401 29 100.0 32 ............................. GTCGGCGGCCGCCTGGTCGTCATCTCCAAGCC 140462 29 100.0 32 ............................. GAGGCCGCCGGGGCGCCGACCCTGAACACGCT 140523 29 100.0 32 ............................. ATCCGCTGGGTCCTGGTCGCGTCCGGCGCGAT 140584 29 100.0 32 ............................. TGGATCGACACCTTCCTCGCCGCGCTCACCAC 140645 29 100.0 32 ............................. GACCAGCTCGTCAAGCGGAAGATGGGCGGCGA 140706 29 100.0 32 ............................. TCCTACTTCGACGCGCACCCCCAGTACGTCCT 140767 29 100.0 32 ............................. GGATCTCGGTGAACCTCCCGCACGCCCTCGGT 140828 29 100.0 32 ............................. TCCGCCGGCTGGAGGCGCTGCTCGCCGAGGCC 140889 29 100.0 32 ............................. AGATAGTCGATCCCGGTGTCCTCCAGGAAGAC 140950 29 100.0 32 ............................. GCGATGCGAGCCTGACCCTTACCCAGATCGAG 141011 29 100.0 32 ............................. GAACCGGAGCCACCGACGGAACTCAGTACGGT 141072 29 100.0 32 ............................. CGCGCCTGGGGGGAGTCGAAACGGACGACGGT 141133 29 100.0 32 ............................. GCCGAGCCGATGGCGAGGACGGGCACGAACGG 141194 29 100.0 32 ............................. TCTCTTCTGAAGCCGCTGCTGTGCCACGCTGA 141255 29 100.0 32 ............................. CCAAGTATGTCGTTACTCCTGCGCGTTCAGGG 141316 29 100.0 32 ............................. GACTCCGCCCAGTTCCTGGAGACCCGCAAGCT 141377 29 100.0 32 ............................. CACATGCCGCAGACATTCACAGGTCCCTTACA 141438 29 100.0 32 ............................. GAGCAGACCCGGTGCCCGAGGTGGTACCGGCC 141499 29 100.0 32 ............................. GCCTCGGCGTCGGAAACCTCGGGGTGCCAGTG 141560 29 100.0 32 ............................. GCCTCGGCGCGAGAGGCGGCCATCCTTCATGC 141621 29 100.0 32 ............................. TACCGCTCTACACCTTCATCGACGAGGGCGGC 141682 29 96.6 32 ...........A................. TACGACGAGGTCGTCGTGACCGAGGCCGGAGG 141743 29 100.0 32 ............................. GTGTAACGATGAGGGCGTCTCCGGCGTGCCCG 141804 29 100.0 32 ............................. GAGATCGACGTCCCCGAGGGCGATGTCGGCGA 141865 29 96.6 32 ..............T.............. CGTGAGGCGGCCGACTGGTACGCGCCGACGGC 141926 29 96.6 32 ..............T.............. CCGGCGCTCGACTCCCGGGTGACCGACACCCT 141987 29 96.6 153 ..............T.............. CGGCCGCCCTCGGCGGACCGGGGCCTCTGGCAGTGGTCCCCACGCACGCGGGGACCACAGGTCGTTGATCGTGTCGTTCGGGAGCCAGCGGGGTCCAACCCCGCGTACGCGGGGATCACGCCGAGGTTGAAGGGGAGGACGAAAACGCCAGAG 142169 29 86.2 0 ..C.A.......TG............... | C [142171] ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 46 29 99.4 35 GTGATCCCCGCGCACGCGGGGTTGGACCC # Left flank : CCAACTGCCCGGTCGGCCTGAGAGGGTTTCTCACCCGCTGGCTTCTGGAGATCTCTCCGGGAGTCTTCCTCGGCTCTCCCTCGGCCCGCATCCGCGAGGCGCTCTGGAACGAGGTCCGTCAATACGCCGACCAAGGCCGTGCTCTGCTCGCCTATCAGACGAACAACGAGCAGGGCTACACCTTCGAAACCCACGATCACGCGTGGCACCCCACCGACCACGAGGGGCTGACACTGATCCGCCGCCCGAACCCCGCCTCGGGCCGCCCGGCGCAGCGAACGCCTGCGGTTCCCCAGCAGGGGTGGAGCAAGGCGTCCAAGCGCCGCAGATTCGGCGGCAGATAGGAGACGGCACCCTTGGGGAGGTCCGGAGCGGCAGGCATGGGCATGCAGAATAGAGGTTCATCGAAATCCGCTATGCGAGATAAATGCTCAATGTCGCAATCCTGGGAAGTAAGCAAAAACAGGCACCTGACCGGATAAAGCCGCTGGTCAGCTCCT # Right flank : CACGCGCTGCGCCTCCTCTGAGATCTCTTACCGGCGACAAGTGCCGGTGAAGCACGTTCACTCATCCGTGCCGCACGTTTCGAGGTGCTGCGTTAGCGGTTGGAAAGCTCGGCCAGATGCGCTTCCCTCGCCCCTAAACCATGGTCATTATGGCGTTCTGACGCCATATCGCTGCCAGAACGCCATTGCCCCTCGAACCCCACCAAAACTACGCGCAGCGGATGTGTGTCTCAGTACGTCCTACGGAACCTGATGCCCGGCTGACGCACCGCGTCCGCCGGACCGGGGCCCGGCGGACGCGGGCCGCGGCGCGGCCCGGTGGTTTTCCGCCGTTCTTTCCGGCCGTCCGGTGGTTTTACGGGTGGAAGGAAGACGGTGCCCGGAAGCGTCGGGTTGCCCCGGTCGCGGGACTTCCTTCCCGTGGCGTCCGCTTCGCCGGAATGGGGCGGGACCATTCAGCTTGTGAAGGCACTCGGGAAGGGTCCGCCGGCCGGCCGGGG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCCCCGCGCACGCGGGGTTGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGACCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2786-2451 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMUL01000021.1 Streptomyces termitum strain JCM 4518 sequence21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2785 29 100.0 32 ............................. AAGCCCCGCCCGACCCTGGGCGACGGCCCGTT 2724 29 96.6 32 ..........A.................. TGGGCGGTGCCGGAGAACCGCGCCAAGCCGAA 2663 29 96.6 32 ............................T CGTGAAGTACGAACAGGTACTTGCGCAAGTTC 2602 29 100.0 32 ............................. GAGGAAAAGGCCGCCGCCGCGGCCGGGGTCAC 2541 29 100.0 32 ............................. CGGGCCCGCACGGCGGAGATCCACGCCAGGGC 2480 29 89.7 0 ....C.........C............T. | C [2471] ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.1 32 CTGCTCCCCGCGCCTGCGGGGATGGACCC # Left flank : CTCGGCGGCTACGGCTACACCCGCGACTTCCCGGTCGAGCGCTACATGCGCGAAGCCAAGATCATGCAGATCTTCGAGGGAACGAACCAGATCCAGCGCCTCGTCATCAGCCGAGGGCTGGCGAAGCCGGAGAAGTAGCAGGTCGAACCATGTGTGACGAGGGCTGGGCTCGCCCCGGGAGCTGCGGGGCCACCCTGTGCGGAGCGCCCCTTGGACGCCGCTCGGGAGAAATCCGGGGCGAGGGGGGAGGCGTGTGGGGAGGAAGGCGGGGCGCACGGCCTTTACGAGGGCACGGAGCAGCCCTCACCACCGACCGCGCGGTCTTCCCCCTGCTGCGCCCTGGTCGGCCTGCGACCGCCCCGCCCGGACATCCCAGGCGGGGCGGCGGCCGTCCAGGCCGGACCGGCCCACCTCGGCGATGCGAGGTGGGTGTTTTGCCGGTTTCAGCGAAAGTTGCTCGAAGGGTGCCCGATGTGGGGTAGAAGTGCAGGTCAGGAAGA # Right flank : GAACACGCTTGCCGAGACCCTGAGTGCGTCCACGCGGAGGGTACGAACGGTGCTGAGGTCGAAGCGTTCTTGAGCCACTGGAGAGGGTCTGCTCATAGCCTGCGTGATCCCGACGGGCGGCCTGGTGGCGGTCTGCCATGGCGCGGATCGGCCGGGCCGGCTCTCCTGACACCCATGGTCAGGGTCCGTAGGATCGCGCCCATGATTCGTGCGGTGGTGTTCGACGTCGGTGAGTGCCTGGTGGACGAGACCAGGGAGTACGGCACGTGGGCGGACTGGCTCGGTGTACCCCGGCACACCTTCGCGGCCATGTTCGGCGCGGTGATCGCCCAGGGCCGGGACTACCGCGAGACCTTCCAGGCGTTCCGGCCGGGCTTCGACCTCTACGAGCAGCGGGAGGCCCGCGCCGCCGCCGGCCGGCCCGAGCAATTCGGCGAGGAGGACCTCTACCCCGACGTCCGCCCCGCGCTCGCCCGGCTTCGCGCCGATGGCCTGTGGCT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCTGCGGGGATGGACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //