Array 1 53281-50932 **** Predicted by CRISPRDetect 2.4 *** >NZ_SULH01000003.1 Levilactobacillus enshiensis strain HBUAS57009 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 53280 36 100.0 30 .................................... GAAAACTCGGGGCATCCCTCTCAAAGAGAA 53214 36 100.0 30 .................................... ATCCTGAGCCGGCAACTGGCGGGGCAGACC 53148 36 100.0 30 .................................... TATTGGTGCGGACACCCACTCACTATTAGT 53082 36 100.0 31 .................................... ATAGTCATAACTGTTTACCTCCTACTCTTGA 53015 36 100.0 30 .................................... CAAGTTGGCACCACACGGGTAGTTTTTTCA 52949 36 100.0 30 .................................... TGGCGAAGGAGGTCTTGCCTGATGGCAACC 52883 36 100.0 30 .................................... TAGATTTAACATGTTTGCAATTGATGGTTG 52817 36 100.0 30 .................................... CCGGCACCCATGTCCACATCGGTGCCTCTA 52751 36 100.0 30 .................................... ACCGCACCAGCGGAGAACGTCTGCTGCTTC 52685 36 100.0 30 .................................... ACTGGATGCAAGTTACCGGCCAGCTACGAT 52619 36 100.0 30 .................................... CTACGGAATCCACGGCTATGCAGACGATGC 52553 36 100.0 30 .................................... TTTTCCCCGGTGAAATGACGCCGGCCGAAG 52487 36 100.0 30 .................................... ACCTCTTTTCTTAGCTAGCCTTAAAGAACT 52421 36 100.0 30 .................................... GATAGTGATAAAACTCTTTTGGGAGTTATT 52355 36 100.0 30 .................................... ATCCTTGTAAAGTTCGTTTTCAAAGTCAAT 52289 36 100.0 30 .................................... AATGGAACGGAACTTCTGCTTCCACACAAT 52223 36 100.0 30 .................................... ACATTGGTGAACACTTCAAATAAGGAGATG 52157 36 100.0 30 .................................... AAACTATTGCGCCTGTTAACCGGTTATCTT 52091 36 100.0 30 .................................... GCGTCCTCATCCTCTACACGTACCTCATAG 52025 36 100.0 30 .................................... CATAGACCATGTTGTAATTGAACCATGATA 51959 36 100.0 30 .................................... AAATAATGTATTTCCTCACCTCTATAAGTT 51893 36 100.0 30 .................................... TGAGCTTCTGTCATCTTCACGTCATTGTCA 51827 36 100.0 30 .................................... TTAGTGCGGCCCACGTCGAAATCTGTTCAT 51761 36 100.0 30 .................................... TCAAAGGTAACGTTACCAATGACAGCGGTG 51695 36 100.0 30 .................................... TTATTGAACCGACAATTGATATTTGGACGC 51629 36 100.0 30 .................................... CGAGAAAGGTGCGATTATCGATGGCTTGGA 51563 36 100.0 30 .................................... TAAGGCACGCACCTATCATGCGCTGCGTGG 51497 36 100.0 30 .................................... CATAAAGATTTGAATGGCTTTGCGGAAGCC 51431 36 100.0 30 .................................... CTAGTAAGAGAAGCTGTTATCCATGCCGTT 51365 36 100.0 30 .................................... AATATCAGGACTCGAAATACCGCACTGGAA 51299 36 100.0 30 .................................... TGCTGAGTTACACCAAAAGGAGAGTCATGA 51233 36 100.0 30 .................................... CCTTGCTTAGTCGTCTTTGCAGTGCTGTCA 51167 36 100.0 30 .................................... ACGCTGGTTTGACAGCGAAGGTCGATAGCT 51101 36 100.0 30 .................................... TCAAAGAGCTACGTGAACTGCTAGACGAAC 51035 36 100.0 30 .................................... AACTATGGTAATGGCTAGCCTACCCAATCC 50969 36 91.7 0 ..........................A.C.....C. | A,A [50936,50940] ========== ====== ====== ====== ==================================== =============================== ================== 36 36 99.8 30 GCTTTAGGTTAGTAGCAAATCAATAAGGTCAAGAAC # Left flank : ACATTGGACTTGAATGTTCTTTTCCAAAAAAAGTTGCAGGCAAAGTTGACAACGTTGTTAGCAGAAGATCAAGTTGTTCAAATGGCAGATGATTTAAGAAGGCTACTATCTCAATTGTTGGCTGATAGTTATTTGATGGATGTTCCGCTGGAGTTGCCAGAAATACCGGGATTGGCAAAGTTAATCAAGTTCAGTAATATCCAGTTAACGTCCGAATTAAACGATGACGCTTATGCTATAATTGAGACATTAATCAAGGTCCTTTTAGAGTTAAATGATCATAAGCTAATTGTTTTGACCAATGTTAGTCATTATCTCAGTAGCAGCCAACTTCAAATGTTGGTGAGATTTATGGCGAACGCTGATTTGCCACTTCTTCTAATTGAATTTTCACCTACTAAGCGAACATCATACTTCAAGGAATGTGATTATCACTTCATTGATGACGATTTTGTTCTGTGGTAGAAAAATCGGTATGAGATATTAGTGTGAAAATGTCG # Right flank : AATCTACCAAATAGCATCCCACTGTTTCAATATAGATCCTAACTGGTCACTAAGTAGACTATTGTTAGTAATCAAAAAAGACGATTTACTCCTAAATTAAACACACTAGGAATAAACCGTCTTCTTTTCATATAACCACAAATCTAGCCGCAATAAGGGACTGGCTTACTGTAATAGTATCCTTGCGTCATTTGGGCATTGTATTTCTGGGCAAGCTTGACGTCGTCTTGATCCTCGATACCTTCAATGGTGAAGCCGAGTTGATACATGTCCGCAATCTTGCGCCAAGTGTTCAGGCTGCCGAGTAAGTCGGCTTGCCGATGTTGGAGGCGAAAGTTTTGCATCGCGAACTTGATGTTGTCCATGAAGGGCAGCACATCTTGAATCGCCGGGGACCAGGCATTGTCAGTGCCCACGTCGTCCAAACTCAGTTTAATGTCGAAAGCCTTGTAGAGCGCCACGTAGCGGTGTAATTCTTCTAGCGTGGGTGCTTCGGTCAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGGTTAGTAGCAAATCAATAAGGTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 50260-50109 **** Predicted by CRISPRDetect 2.4 *** >NZ_SULH01000005.1 Levilactobacillus enshiensis strain HBUAS57009 Scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50259 29 96.6 32 ............................T TATGATCTAAGCGATGAACCGGATGCGTTGAG 50198 29 100.0 32 ............................. CAATCGACTTGGAACGCCCAGGATAACTTTAA 50137 29 79.3 0 .....................C.ATGTT. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 92.0 32 GTGTTCCCCGTGTATACGGGGGTGATCCC # Left flank : CTTTATCTTTAAGCGGTTAGGGTTAAGTTAGGATATCAAAAAAATCGCGCAACTCTCGGGGAGGAGAGCGGCGCGATTTTTATCATGAGGAGTGGGTTCACATAGGGGGTGTGAATCCATTATTAGAGGAGTCGTTAGGCTTGAGGGAACCTAACGAGGGAATGATTCTCTTAGGGGGAGAGAATCTAAAAGGGATTGGATATAGAATTTGAGTAGTAACAGTTATTGGCTAATTACTATGGTTATTACTATACCCGGAGATTGTGACCAGAAAAGGGCTAAAGTTGTGATGACTTTGCGATAAATTGTTAAAGGAAGTCTAAACGTGTGAAGATTTCTGGGATTTCAGGTCAAGTTAAGATTGAATGTCTCTGGCTGACCATGAGAATTAGGACGATTAATTGATTGTGATGGGGCAATGACTGAGGTATGCTAAAAGCAAGTTAAACAAATTTGGTGGTTTGGGAAAAATAGAATGCCGGTCTATCAAGGATTTTTTA # Right flank : AAAAAAGGTCCGGCAAATTTGCCGGGCCTTTATACTATAAAATTAACCTCTTAATCAAAATAAGTCTGTAAAAATTCCATGACGTGCGCCTGATACCGCGCTGGGTTGATCCAGAAACTTTCGGCATGCGAGGCGTTTTTTACGATCCACAACTGTTTAGGAGCGTGGGTGGCTGCGTAGCTTTCGTAAGCCATGCCCACTGACACGTAAACGTCCCTTTCGCCATGAATGAAGAGAATGGGACGCTTATTCTTTTTGAGTTGATCCGTAGCGGTCACGTCGCCGAGGTAGTAGCCAAGTCGGCGTTTGGAAATGGTGCTGACCAGCGGCTCAATCGGATATTTTGGCAGGTGAAATTGACGCTTTAATAAGTAGGTCAATTCAGCTTCGATGCTGGAGTAGCCACAATCGGCGATGATGGCTTTGACCTGTGACGGGAGACTTTCACCGGAGAGCATCTCCATAGTGGCGCCCCCCATGCTAACGCCAAACATGAGAAT # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTATACGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGTATACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //