Array 1 12-345 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALDT010000270.1 Dietzia sp. DQ11-71 NODE_270_lenth_2404, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 12 28 100.0 33 ............................ CCGCCACCACCTGACCACCTCGCCAGGCTCGGG 73 28 100.0 33 ............................ CGAGGACTGTCGTACCTGCGGGGCACAATTCGA 134 28 92.9 33 ..AG........................ GACGGCGGACGTGGCGATCGCGGTGCGGCCGTG 195 28 100.0 34 ............................ CAGCAGGGCTTGCGCCCACAGGGTGAGGTTGAAG 257 28 100.0 33 ............................ CGAGGACTGTCGTACCTGCGGGGCACAATTCGA 318 28 89.3 0 ..AG......................T. | ========== ====== ====== ====== ============================ ================================== ================== 6 28 97.0 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : ACATGGCCGACG # Right flank : CTACCTCGGCTTGCAGTACACGGCTGGCGCCGCTGTGAACCCATTGCGAGCGAAAGGGATCGGCAGTGATCGAGTTCTACTGGAATTAGCCAACGTGTTTGCAGCAACGCTATTCCTGCCTTGTAGGGCTGGCAACCTAACCGCGCGGCGCGCGTAACCAGAGTGCGTCGACAGTGGGACCGTCTACGCGGCGACCCCGGACGCCACCGCGTTCCTCGACCGCGTCATGAGGTGATCGCGGGGCCGGCGGCCGCGCGGCCAGGGCGTGGGGCTGGGGTCGCGGGCCGGGTGTGGGGCCGGGGTGGCCGGGCGGCCACCGCTACCCCCATCTACACCGGGTGTCCATATGTGGCGTTTCATAACTGCTGGCCAACGGCATCGGGGCGGGGCACGGCAATGTGACACCCGTCATAATTGTTACCGACTTGTCACCCAGCGCGATTTCAGGTTAGAGTTTCGCCATCGCCGCGCGGGGATGTTTCAGGGACTCCCCGCGCGGC # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1382-13 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALDT010000032.1 Dietzia sp. DQ11-71 NODE_32_lenth_1391, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1381 28 100.0 33 ............................ CGTGAGGAGGTCCCTCGTCTGGGGAGCGAATCG 1320 28 100.0 33 ............................ GGCAGCACCCGGGGGCCGGTTCGCCGAGCTGCG 1259 28 100.0 33 ............................ CGTTGGGCAAGTCTGTTAGTCGCGTAAGTGCGT 1198 28 96.4 33 ...........A................ CTCGCCGCGGCTGTGCAGAAGCTCAAGGTCGCC 1137 28 100.0 33 ............................ CTGGTCCAGGTCGACGCGCAGGGCGTCGAGGTG 1076 28 100.0 33 ............................ CTGTCGATCGCGGCTGCCGAGTTCGCCGGTCGG 1015 28 100.0 33 ............................ CTCGTGTACGGGTTCGAGTCCCGTTTCGTCGAC 954 28 100.0 33 ............................ CCGAGGTGGCGGTTCGCCGGCATCTACTTCTAC 893 28 100.0 33 ............................ CGAGAACATGACCGACTGCACAGGATCGTTCGT 832 28 100.0 33 ............................ CGTCTTGAACCGCGAGGAGATGATCGCGTGCGG 771 28 100.0 33 ............................ CGTCTGGAGGTTCTAACCTATGTCTGTTGCTGA 710 28 100.0 33 ............................ CCGGAGAGCTCGGCGGGGGTGTAGTAGTCAGTG 649 28 100.0 33 ............................ CCGCTTCCGGCGGTCCTTGACCTTGAACACCAG 588 28 100.0 33 ............................ CTGGGACCAGTCCGTGAACGGGAGATAGAGCGG 527 28 100.0 33 ............................ TCGGCGTAGTCACCGCACGGGGACCACACGTCC 466 28 100.0 33 ............................ CTGGCGACGCGTACGCCGCCCCGCTTCTGCCTG 405 28 100.0 33 ............................ CCACTTCGACGGCTGGAACTCCGGCGGCAGACC 344 28 100.0 32 ............................ CTGGCATCGCCATGGAATCGGCCCGGGGCCGA 284 28 100.0 33 ............................ CCCCGGCCTGACCCTCGGCCTGCTCGACGACCA 223 28 100.0 33 ............................ CGCCAATGTCTACGGCGGGGACCCGGAGCCGTG 162 28 100.0 33 ............................ CGCTTGATGAGTGGCGGTTCGCACGTTCATCTC 101 28 100.0 33 ............................ GGAAGGGGGCGACCCTACGGGGGCGACTCCGGT 40 28 92.9 0 .C.........................G | ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : TCTCGACCA # Right flank : GTGGGTCAACGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [6.7-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4056-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALDT010000090.1 Dietzia sp. DQ11-71 NODE_90_lenth_16594, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4055 28 100.0 33 ............................ CGAGAAGGGCGAGCAGGAGTTCAACGGCTGGGA 3994 28 100.0 33 ............................ CGACAGACCAGAAATATCCGGCACCGGAGCATC 3933 28 100.0 33 ............................ CTTGGCTACTTCGGCGACCACCTCTCGGGCCTG 3872 28 100.0 33 ............................ CTCGCTGAAGCTGGGGACCCGCTCGGTCAGCGG 3811 28 100.0 33 ............................ CCCGCCGTCGAGCAGCTCCAGGCCCGTCGTCAT 3750 28 100.0 33 ............................ CGAGCGGAGGTCGCCCTTGCCGCCGCCACCGGA 3689 28 100.0 33 ............................ CAGCATCAGCATGGCCTGCTGCAGTTCGTAGTT 3628 28 100.0 33 ............................ CAACGCCAACCTGGTCCTCCAGGCCAAGGCGTT 3567 28 100.0 33 ............................ CGTCGCCACCCGCTACTGGCGCACCGGCTCCGT 3506 28 100.0 33 ............................ CCTCGGCAGTGACGGTGGCGAGGGCCTTGGCGA 3445 28 100.0 33 ............................ CACCGCCGCCGGATACGCCTCACTCAACGGCAT 3384 28 100.0 33 ............................ CATCACCACCGGTTCCGACAACATCATGATCGG 3323 28 100.0 33 ............................ CCTCAGTGGCCTCATCAGGGTCGAAGTAGACCC 3262 28 100.0 33 ............................ CGCCTCGTGCAGCGCCCACGGGCCCTGCACCTC 3201 28 100.0 33 ............................ CGACACGACGTGGTCGCCGACAATGCGCCGCCA 3140 28 100.0 33 ............................ CGTCGCGGGTCATCTCCTGCCAGGTCGCCCACG 3079 28 100.0 33 ............................ GCTTGGCGACACCATGAACGTCCGCCGCCCCAC 3018 28 100.0 33 ............................ CTCGTAGGTGAACGCAACCCGGTAGGAGGTAGC 2957 28 100.0 33 ............................ TGTGGGCGTGGGCACGTAGCCTTTGCAGTGCGC 2896 28 100.0 33 ............................ CGAAGCCCGCGAACACGTCCGCCGATGCCTCGA 2835 28 100.0 33 ............................ CGGGGAGCACTTGGCCTGGCTCGTACTCGGTGT 2774 28 100.0 33 ............................ TATTGCGGGACGTGTTGGGGTGGCAGACGCGAC 2713 28 100.0 33 ............................ CGACGGCGAGGCGCACGGCACGTGGCCGCTGGA 2652 28 100.0 33 ............................ CGAAGAGATGTCGATGGCGCTGTTCACGCCGCT 2591 28 100.0 33 ............................ CGTTGATGATGCGAGGTCGCCGGCAAGCTGGAT 2530 28 100.0 33 ............................ CGCGGTCAGCGGCTTCTCGGCTTCCATCGCCAG 2469 28 100.0 33 ............................ CCTGGTGGCGGGCACTACCCCCCTCTCGGCCCC 2408 28 100.0 33 ............................ GTACGGCGGCACCTGGTCCTGCGCGAACGCATT 2347 28 100.0 33 ............................ CACCGCATCCAGTACATGGAGCATCGAGAAGAA 2286 28 100.0 33 ............................ CAGGGCGTAGTTGGTCTTGGACCTCGGCGCCAT 2225 28 100.0 33 ............................ CCGTTCCCAGGCAGCCTGACGGCTCATGCCGAG 2164 28 100.0 33 ............................ GTCGGCGTTCCCGATGGAGGTGCCGATAGAGAA 2103 28 100.0 33 ............................ CTGCGGGCGACCAAGGTTGTAGCCGTGACAGAG 2042 28 100.0 33 ............................ CTTCGCCAGTCGGCCCGCGATGATGCGTTCCAG 1981 28 100.0 33 ............................ CATCCACCGCACCTGCACGTAGTAGCCCGGGTC 1920 28 100.0 33 ............................ CCCGGCGCATGGCCTCCGCCACCGCCGCGTCGA 1859 28 100.0 33 ............................ CGTGCCCGTTCCCGAGGTCGGCTCTGAGGTCGA 1798 28 100.0 33 ............................ CAGCCCGAACGTCATGAGTGCCACAGTGATCAT 1737 28 100.0 33 ............................ GTGGGCGCGTGCTCTGGAAAAGCGCGGCTTCCC 1676 28 100.0 33 ............................ CGGGATCAGCTGCAGCCGGCCCCGACGAGCCTT 1615 28 100.0 33 ............................ CAGGACAGCGACAGCGATCTGTGTGTTGCGGTC 1554 28 100.0 33 ............................ ACGGGGACTACAACCCCAACCCGCGCGCGTATG 1493 28 100.0 33 ............................ CGTCGACACCGCCTCCGAGGTCATCGCGCAGCT 1432 28 100.0 33 ............................ CGACCCGACCGGCCTACCCACGGGGTTGGGTGT 1371 28 100.0 33 ............................ CGCGCCACCCGCATCCTTCGAGCACAAGTCCTG 1310 28 96.4 32 .........................C.. CCGCCGAGGGTCCACGTGAGCCATGCGGGCTG 1250 28 100.0 33 ............................ CCGGCCACACGCCGTAAGGCCAACACCGTCACC 1189 28 100.0 33 ............................ CGACGGGCTGCTCAAGCCTGCCCAGGCGGCGGC 1128 28 100.0 33 ............................ CGTAGGCGATGGACCGGGCACGGCGGTGGTTCG 1067 28 100.0 33 ............................ CGACAGGGGGGCAACGGAAGCCACCCACGCCTG 1006 28 100.0 33 ............................ CGTGCGCGGCCTGGGATGCTTCCGCGGCGGCGT 945 28 100.0 33 ............................ GCCGCGCTGCTCCCCGGCGATGGCCGCTTCCAT 884 28 100.0 33 ............................ CGTCGGGTCAGCCCTGCGGTTGATCGTCTGCGA 823 28 100.0 33 ............................ CTATGGACAAGTCACGGAGTACGGCGAGCAGAA 762 28 100.0 33 ............................ CGACGGCTGCGGAAACCTGTCCGGGGCCAAACG 701 28 100.0 33 ............................ CAAGGCCGGCAAGACCACCTTCGTCGCCAACCT 640 28 100.0 33 ............................ CATCACCCAGGGGTAGGTGTTCACCGTGCCCAT 579 28 96.4 33 ........................T... CGCGGCGGGTTCACTGCCCCACGGGTCGGGCTG 518 28 100.0 33 ............................ CAAGCCGCACGGGCGCTGTGGGACCACGACAAC 457 28 100.0 34 ............................ CTTCTTCGCCGCAGAGTGGTCACGTGACATTGAT 395 28 100.0 33 ............................ GTGGACCCCCGAACAAGCCGGACACGTCGGCGA 334 28 96.4 34 .................C.......... GAAGGGCGAGATGGTCGACCGGGCCGTCCGCGCC 272 28 100.0 33 ............................ CATGGCGTGCTCAACGTCATGCGAGCGGATCGG 211 28 100.0 33 ............................ CGCGGACACGCTGACGGCGCGGGACTGCTGGTT 150 28 100.0 33 ............................ CGTCCGCGACAGGTTCGAGGGAGTGATCCCCGC 89 28 100.0 33 ............................ CACCTCCCCGATGCGGGTCTCGGTCTCGACCAC 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 67 28 99.8 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : CCTCACCAGTTGTCCGGCGAAACTCCGCGGACAACTTACCCGCTGGCTGCTTGAGATCAGCGCCGGAGTCTACGTCGGCCACGTTCCGGCTCGAGTACGGGACCTACTATGGAGCCAGATCGTCGAGTACGTGAAGGACGGCAAGGCGATCATGGTGCACAATTCTGACGGGGAACAGCGGCTTACATTCAAGACTCACCGTCACGAATGGGAGCCCGTCGATCTCGACGGCATCACCCTGATCCGTCGTCCGACCAACAACGAAACCACCCGTGGACGAGTTCGCAAGGGCTGGAGCACGGCTGCACAGCGTCGACGCAGACGTTACTGAAGTGATCGGCCGCTAGGAGCCGCGAGATACTGGCGCTCCCGATTAGTAGCCTTGTACAAGTTAGTTCTTCGGCCGAGTACTGCGCCATTTCTCCGTCCGACCCCAGCCACTCCTGTCATAAGTCATGGAAGAGTGCCTTAGTCGATTGTAAGATGGCTGGTCAGCAAGC # Right flank : C # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //