Array 1 1723675-1723341 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR130844.1 Anaerococcus vaginimassiliensis strain Marseille-P4512, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1723674 28 100.0 34 ............................ CGAAGCTGGAATAGAGAATAATGTAAACTTTTCA 1723612 28 100.0 33 ............................ CCTACAGCACTTTCTATATTTTCATCAGGATTT 1723551 28 100.0 33 ............................ TTCCCAAAAAGAAAAGTCCCTGTTGTTGTTATT 1723490 28 100.0 33 ............................ TAGTATCTCCAGCACTAAACTTATACTGTGGAT 1723429 28 92.9 33 ........T...C............... TTTCTTCTAAATCTACCTCAAATGCAGTAAAGC 1723368 28 89.3 0 ............C........C.A.... | ========== ====== ====== ====== ============================ ================================== ================== 6 28 97.0 33 GTTGTACCCGCGTAAGCGGGGGTGATCC # Left flank : ATCCAACTGAGTTGGAATATTATATAAGAATGAAAAAAAAGTGGGGAGTTTCAATACAAGCAATGCTTTATCGAGCTTGTGATTTAGGAATCATAACTAATAATCAATTTCAATATCTAATGCGACAAATAAATAGTAAAGGTTGGAGACAGAATGAACCAGGGGATTTCCCACATGTATTAAATGAAAATATATTTAAAATGGGAATAAAATTATTGTTAGAAAATGATTACTCTAAACAAGATATTATTCATATTTTTGAGGAATCATCAGTAAATCTATTTAGTGATGAAATAGAAGAATTATTAAATTTACCGAAGGGGTATTTAAGTGTTGATGATAATGTTAAGAATAATATTTTAGAGTTGAAACTTAATAAAAATAATTAATAGATTGATATATTAATTATATTTTTAACGGAGCTAGTGAAGGCTCCGTTTTTATAATTTGTAATAAAGCAAATTTATCATAAGCTTGACATGAGAGGGTACGAAAGTAGT # Right flank : ATAGAGCCTGATATGGTAAGAAATTATGATTTAGTATCTGAATATTCAAAGGAAGTTCAAAGCATATTGAATAAACAAGCCAATATATTAATACAAGCACAAAAGGCAGACTTAAACCAAGATAGGATTGATATGTTAGTAAATAAGATTAGTGAATATGATTCCTTTGAAAAAGGCAAGTGGTTACTAGATGAACCCATTAGAAATTTCACTCAGTCTATAGTCGACGATACTATAAAGAAAAATGCAGACCTTCACTATAAGGCAGGATTAAGACCTAAAATTATTAGGAGAGAAAAAGGAAACTGTTGTGATTGGTGAAAATCTATTGCTGGAGTATATGACTATCAAGAAGTTAAAAATACAGGTAACAATGTATATAGGAGGCATAGATATTGTAGATGCACTGTTGATTATGTGCCGGATAAAAATAGAAGACAGGATGTTTGGTCAAAACAGTGGAATGATCCTGAAAAACGTGATAAAATAGAAGAAAGAAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACCCGCGTAAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 1809861-1809649 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR130844.1 Anaerococcus vaginimassiliensis strain Marseille-P4512, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1809860 29 100.0 32 ............................. GAATGCTTAGATTTAGTAGATCAGCTTATAGA 1809799 29 100.0 32 ............................. TCTTCAGCTGTAGGATACATGGCAAAGTGTAT 1809738 29 100.0 32 ............................. CTAACCTCGTAAGACCATCTGCAATGATTTCT 1809677 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTTGTACCCGCGTAAGCGGGGGTGATCCT # Left flank : GAAAAGCATAAGATAATAGAAATTGGAGCTGTACTCACTAATAGTCAAGGTGAAGTTTTAGATAAATTCGAAAGTCTTATAAGGCAGGAAATAAAACTATCAAATGAAATAATAAAACTGACTGGAATAACTGGTAATGACCTAATAAATGGAGGGGACGAAAAGAAAGTACTAGAAGATTTCGTTTGTTTTATAAAAAACTACCCTCTGGTTGGCTATAACTTTAACTTTGATATGAAGTTTCTAAATTACAATTTAGAGAAAAATTCTCTAAAAGAAATCACAAACACTACCTACGACCTAAAAACTTATGTAAAAAGAGAAAAAATGTTTCTAAAAAACTATAAACTAGAAACAGTCCTTAAAGAATACGGGATCAAAAAGAAAGTTGACCATAGAGCCTTAGCTGATGCTCTAGTGACAGTTGACTTAGCAAGCCAAGTAAATGAATTTCTAAAAAAGCTATAATAAGAATTGCTTAAAATAGAGAAATATTTACT # Right flank : GCCTTGGAGATAACAGACGGGTTTCGTGTCATAATAGTGATAGAGGCAAATAGTTATGTAAATACAAGGAGTTCAAGACTTCTACCAAAGTTTAAAATTCAAAAAATAAATAGTTGGTGTGCTGCTTAGAGTATCCATTTTAATAATGGATATTGTAAATAGCATACCAATAAAACTAAAGATTCTTTAAAGAGTCTTATTTTGTGATGAAAATTTAATATGCAAATCTCAGACGATAGAAAGCAATAATTCTGTCGTTTTTTTATTTTAAAGAAAGGAGGTAAGAATGAATTTTGATTATTTTTATAATAGGCAATCTGAGATGTATAACTTCATTAGATTACCTATGGTATTAATGGAAGATGAAGTTTTTGAGAGCATTTCTATTGAAGCAAAAGTTTTGTATTCATATATGCTTAATCGAATGGGTCTTTCATATAAAAATGGCTGGATAGATGAAGACGGAAAAGTCTTTATTTACTACACAATTGAAAGTATAA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACCCGCGTAAGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //