Array 1 199237-199735 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QQMU01000003.1 Neisseria lactamica strain M37110 M37110_CHA4301A24_cleaned_ctg_2180, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    199237	    36	 100.0	    30	....................................	ATTACTAAATTTACCAAGCTGCTGGTCGAG 	
    199303	    36	 100.0	    30	....................................	AACAAACCTTTATTTCACAAGCAGTTCGAT 	
    199369	    36	 100.0	    30	....................................	CGACCCCTCTACATCTTCGCACACATCGAT 	
    199435	    36	 100.0	    31	....................................	TCTTTTTTTTTCTTCTTCGGGCATCTCTCCG	
    199502	    36	 100.0	    30	....................................	CATCGCCGGCGGAAAAATCAAATTAAGCCT 	
    199568	    36	 100.0	    30	....................................	TACAAATCTTTCTGGACGTCCTCCCCCTGC 	
    199634	    36	 100.0	    30	....................................	AGAGATAGTGAATTGCATGGTACAACTCCC 	
    199700	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
         8	    36	 100.0	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                               	       

# Left flank :   TTTATTTTCAATTTTATGTTGAACTTTAAAGCAGTTTCGCAGTGCTGAAATTCCGCCCGAGCCCTTAAACCATACACGGCAGATGCCGTTCACAAAGGCGATGTGCAACTTTGCCCGAAACAGTCCGCCTTTACCCTTACAAGGACGAACAGCAAAAGACGGAACAGCCCGTACAGTCCGCGAAAGCGGAAAAACCCCAAGTTTTAGCAATGGATGCGGCAAAATAGAAAACCGCCCTTAATCGGGCGGTTTTGGCGGTCTATTGACTTAAAAGCACAATCAAGGCTAGAATAACCCCAGCATCAATCGTAACAGTCAATTGCAAAGTACCTACGCTAATAGAGATTTGCATTTTGATGTTTCCTGTGAAGTTTCAAAACTTGGCAGGAATGCAAAAATCCCCTTGTTCTCAGCTTGGGGATTTTTGTTTGTCCCCGCCGATTTTTTAAAATCCGCGCCTCTCGCGCCTGAACCTATCTCATAAAGTTCCTTATATATTA
# Right flank :  TACCCCAACGGGAAATCCTTATTATGTAAGGGTTTCCCGTTTTATTTGTTCTGAAAAAATGGGCTTAAAATAATAATAGTTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGCAGGTTTGCACACAGCCTGTTGTGGTGTTTTTGCAACGAATCTCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0   Confidence: HIGH] 

# Array family : NA
//