Array 1 6964-7357 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABSUC010000021.1 Streptomyces lunaelactis strain MM15 NODE_21_length_55516_cov_9.73487, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6964 28 89.3 33 ..........C.....T...T....... GGCCTGTTCGTGTCACCGACCCGGGTTACGGGG 7025 28 92.9 33 ...G......C................. AACAGCAGCGACCGCAGCGACGTGGACAGCGCC 7086 28 96.4 33 ..........C................. TCCTGTTGACAGGATGACACGGAGGGTAGGCAA 7147 28 100.0 33 ............................ GCATTCGGGGGCGGTCCGGTTTGGGGTGCAGAT 7208 28 100.0 33 ............................ CCGGAGTCCTTCGTCCGCACCATCGAGGGACGT 7269 28 100.0 33 ............................ CGCGGTCGTCGACGAAGGCCTCAAGCACGGCGA 7330 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.4 33 GGAACATCCCTGCGGGCGCGGGGCCGAC # Left flank : GAGTACAGATCGGCACCGGCTTCCTGGCCACCGAGGAGTCCGGCGCCAGCGCCCTCCACCGGGCCGCACTGCACGGCCCCGACGCGCGTACGACCGTACTGACCCGAGCCTTCTCGGGGCGGCTCGCGCGAGCCATCCCCAACCGCTTCACCCGTGAGGCACTGGTGTACGAGAACGAACTGGCGCCCTACCCGATCCAATACACACTCACCCGCCCGCTCCGCACAGCGGCTACGGAACGCGGCCTGGCCGACTACGTCAACCTCTGGTCCGGCCAAGCCGCAGCACTCACCCAGCCGCGCGGCGCCATCGCCTACCTCGACGAGCTCATCGTCGGCACCGAGGCGGCACTGAACCGACCAGCGCCCGGGCACCTGCGCCCCTCCCGGAGCGCCATGAACAATGACACCGGAGCCGTCACTCGCACACCCGGGGAGATGGCATAACTGGCGCGGTGCCGGGCCGACGACACCGCCGGCCGGTACCGGATCGTCCCGCAG # Right flank : CCCTTCGTGACCTGTGATGATAGTCGCGCGAGAGGCCATTTTTGATGAGTTGGGCGGAGTCGGCCCGTGGCTGATGGGGCTCGTTGATCCGGCCAGCGAGAACGGCTTCGAGGCTCCGCGCCACGAGCCGGGGGCGGAGCCTCTTTGGCGTCGGTAAGGCACTCCGCTGTGCGCAGGTGCGTCCACCCGCCACTGCCTGTGACGACCTGCAGATTGCGTGCCATCGAGCGGCTTAGGAGGCGCTGTGTGGACGCGGTGTGGACACAAGCATCTGCACAGACCTGCAAAGCGCGATTGAGAGCCGCAAGCAATACGCCCGCTGACCTGGGAAAACGCCCAAGATCTGAGCAGAGACACAAAGGCCGTCACGATCACCAAAGGACTCATAATCCGTCGGCCGTGGGTTCGAGTCCCACCCGCCCCACTTCTGCAGGTCCCTGACCTGCAGAAACGTCTCTCCTGAGGTGCTGTAACGCGAACTCGGGCTCAACGGACAGAAT # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACATCCCTGCGGGCGCGGGGCCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 1 34530-31599 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABSUC010000032.1 Streptomyces lunaelactis strain MM15 NODE_32_length_47193_cov_8.06829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 34529 37 86.5 36 ..A.......T...C..T.A................. CACGATGAAGACGGACCGATTGAGGTGTGGGAGGAC 34456 37 89.2 36 ..............G....A..G.A............ GAACTGACCGCTGTCACGAGCGGTGGTGCCCAGGCT 34383 36 89.2 35 .C........-.....C....T............... CAGGGCTCATATGCGGTGCGCAACACGGGCTCGAA 34312 37 86.5 38 .........A....CA.............G......T GCCAAAGGAGCCGCGTGGACGGTGGATCAGCTCTCGAA 34237 37 91.9 37 ..............GT.......T............. TGCCGCGAGTGCGCTACCTCCATCCTGCGGACGGCGA 34163 37 86.5 38 .....A......T.C.....T.........C...... GTGACGTGGCTGGACGAGCTGGCGAAGGCCGCGCCGAT 34088 37 94.6 36 ..............C.A.................... TGCATCATGGCGGTCGACCCGGACCTGGAAAGCGGC 34015 37 91.9 37 ............T....A....G.............. GTCGGTATCGCCGGGGCCCTGCAGGCTCAGAAGACTG 33941 37 91.9 37 ...T........T.C...................... CAGCTGGACCCGACGGTCATCATCACGGCCAACGGCA C [33924] 33866 37 78.4 24 A......C......CTCTC...G.............. CTGCCGCTGGTCGTGGCAGAGTCG Deletion [33806] 33805 37 94.6 36 ..A.................T................ CAGATTCTCGACCGGCTGGTGACGGCCTCGGTCCTG 33732 37 83.8 37 ....T.....TT..C.....A.G.............. ACCCCGGACGCCCCGGCACGCGATCGTCGACTCGATC 33658 37 94.6 18 ............T.....................G.. ACGACCCGTGGTCAACGT GC [33652] Deletion [33604] 33601 37 94.6 36 A.............G...................... CAAAACGACCAGACCACCCTTCGCTTCATCGAGCGG 33528 37 89.2 35 .C.......A....C........T............. ATCGACACTCTGGTCTCCCATGTGATGGGCCGGGA 33456 37 83.8 35 .C..........T.CT....T.T.............. TTCAGGCGGCCTTCGGAGCCGATGGCCACGACGTG 33384 37 91.9 35 .....................CG....A......... CGCGTCGGGAGATCGACGACAACGGCGATTTGAAG 33312 37 89.2 36 ..........T.T.C........T............. GTCGGCAGCGACACCGGTATGAACCAGACCACCGAG 33239 37 100.0 36 ..................................... CCCGACGTCTACGCTTACGAGCCGAAACGCCTGCGT 33166 37 91.9 35 ........T.....GG..................... ACCGTGGTCATCGTGTGCGTGCCGGCGCTGCCGGT T [33154] 33093 37 83.8 35 ............T.CG......TT.......G..... GCCGCAGCCGTGACCTTCAGGTCTGTCGACTTGAA 33021 37 86.5 36 ............TC.........T....A.C...... CCCGACGTCTAGGCTTGCAAGCCGAAACTCCTGCAT 32948 37 89.2 36 ..........TT..C.......G.............. CTCTGCGCCGACAACGCTGATCAACACGGCCTACGC G [32932] 32874 37 83.8 37 A....A.C..T...........G.....A........ GAAGAACAATTCGGCCAGTTCGAGCGGCGCATGTCCA 32800 37 83.8 37 ..........T.T.C....A..G.....A........ CGCAAAATGGAGGGACGGCTGCTCATCCACCAGGAAC 32726 37 83.8 33 T.......T.T...CT....T................ CACTTCCGCACAGACCGGCTCTACGGTCGGCCC 32656 37 86.5 35 ..........T.T.CT....T................ GGCGACATGGACGGGTTTGTTGCCAAGGTCTAGAA 32584 37 83.8 33 .........C..T.C.C..A.........G....... GGGTCCGTTTCGCCCCACCACATCGTGTAGTAC 32514 36 81.1 32 ......A.....T.C.A......-AA........... AGCTTCGCGACCCAGCGGAGGTGTTCGGGTTG 32446 37 64.9 35 A.CAT..CG.T.GC.GC....C..T............ GAGATCGAAGAGTTCCTTAACCCTGGTACGTGAAC 32374 37 91.9 36 ........TAT.......................... GCCGTCTCCCCGGCCTTCTGGGTCACACGGGCCAGC 32301 37 83.8 39 .C..........T.C.....T.G.............T TGGACACCGATAGCCGTAAGCGCAGCACCAGCGGTAGCC 32225 37 89.2 38 ...........G....C......T....A........ AGCGTGGACAGTGCCAGCAGCAGCACGGCCTTCGTGCC 32150 37 81.1 37 ....T...TC..TCC.....T................ GTCGGTATCGCCGGGGCCCTGCAGGCTCAGAAGACTG 32076 37 86.5 36 ...T........T.C......A.......G....... TCGACCTGAAAGAAGCACTGCGCGCGGGAGCTGCGC C [32059] 32002 37 91.9 35 ............T.C.........A............ CACCGCAGCTACCTGCATTGCGTCGAGATCGGCAA 31930 37 89.2 37 ..........T...C....A..G.............. CACTGATTTCCCGGCCAGCCGCCTCCCAGCATCACAT 31856 37 91.9 37 T...........T..........T............. AGCAGCGCACGAGACCGCACGCAGCCACAAGTCAGGG 31782 36 89.2 38 ..........-...CT....................T CGGCTCGCCGCACCGGGCGACACGGTGTGGACCGTGTG 31708 37 94.6 36 ..........T...........G.............. CGCATCAAGCTCCCCGCCGTCAAGGTTGACGATGCG 31635 37 54.1 0 CGTAGC.GTCGT.C.GC..A..G......G....... | ========== ====== ====== ====== ===================================== ======================================= ================== 41 37 87.1 35 GTGGCGGTCGCCCTTCGGGGCGACCGAGGATCGCAAC # Left flank : GACAACCCAGGCCGACGTCGACAAGGGCAAGGCCACCGAAATGGGCAACAAGCACATCGTCCCCTACGGCCTCTACCTCGGCACCGGCCACTTCTCCGCACCCCTCGCCACCCGCACAGGCGTCACCGAAGCCGACCTCGAAACCTTCTGGCGCGCCTTCACCCTCATGTTCGAACACGACAGGGCCTCCGCCCGCGGCGAACTCACCCTGCGCGGCCTGTACGTCTTCACCCACGACGACGCCTACGGCAAAGCCCCCGCGCACCAGCTCCTCGACCGCATCCACATCAAGGCAACCGGCACTTCAGCCGTCCGCACCTTCGACGAATACCAAGTCGACATCCCGGATGACAACGACCTCCCCGACGGCATCACCCTGACCAAGGTCATCGGCTAGAAGATTCGCCGAATCCTCGGGGAGACATCAGTTGAAGTCGTCTGCCAGGACTGCCGAGAATCGCAGCGCCGTCATGCGCCCCGCAGGCGCCGCCGCCGCCCAA # Right flank : CTGCCGCAGGGCCCGGACACGCCAGGGTTACTGATGATCTCCGCGTGGTGTCGTCTGGCGGTCGGCAATGACCCCAGGTCAGAAGCCCAGCCGCCATGCGACATCACGGGCGGAATCTCAGAAGCCGTATTCATACCGGTCATCGAGCTTGGGGATCGAACAAGGGTCCTGATCGAATGATCTTGGGGTGGCTCATGCATGAGGACAGGGCCTCGTGGCGATTCGGAAGGTGTTGAAGTCTCACCGATCGCCAGGAGGCCCTGCTTGTCGCAGTTGTATGCGGTTGAGGGCCCGGAGTTCAACTCGCCCGTCGTGTCGTGCGATTGCCTCGCGCACGCGTACGGGAACGCGGCGGATCAGCCGGATCGGGTGCGGTGTTATCCGTCGGATATGACGGACGCGGAGTGGGCCGAGGTTCGGGTGCTGCTGCCGGTGCCGGCCTGGCTGGAGGGCCGGGGCGGGCGGCCGGAGGGCTACTGCCACCGGCAGATGCTCGACGC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:-1.5, 6:0.25, 7:-0.03, 8:1, 9:0.05, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTTCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTTCGGGACGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.80,-18.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [85-61] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //