Array 1 784265-785858 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDLK01000002.1 Leclercia adecarboxylata strain FDAARGOS_404 pRIID_108.contig.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 784265 28 100.0 33 ............................ ACGGTGAACGCCGCGCTGTGCTCCTCTTTCCAG 784326 28 100.0 32 ............................ AGTTCGAGCTGCCCGGCAAGATGGATGACCTG 784386 28 100.0 33 ............................ GCGCAGCTTGCGCGGTTCATAGAGCGGCAATGG 784447 28 100.0 32 ............................ AACCGTCTGAAAGCTCTGACTTACCAGACCAA 784507 28 100.0 32 ............................ GTCAAGCACTAATAGCTAATTTAGTCCGTTTC 784567 28 100.0 33 ............................ CTGGTTGTAATACTGCTCAAATAGCCCAGCCTT 784628 28 100.0 32 ............................ TAACAGGGTTCGCATGCATATCAGTAATAATA 784688 28 100.0 32 ............................ TTCGGGCCTTTCAGTTCTGTCGCGTGCTCAAC 784748 28 100.0 32 ............................ ACATACCCGGCCACATTCAAGATAGACAAGGA 784808 28 100.0 32 ............................ TTTTCGGTGCCTTGCCATCAGCAATGCGTCGC 784868 28 100.0 32 ............................ AGTATCCCCACAGCTTGAGAGGCGGGATTGTC 784928 28 100.0 32 ............................ CTTAAAGACAGTAAAAATTTACGGTGGAAAAT 784988 28 100.0 32 ............................ ACGCACCAGCGCACTCGCTTTCTGGCCTCGTC 785048 28 100.0 32 ............................ GGATAATGCGTTACCAGTCAGGCTCACCGCTC 785108 28 100.0 32 ............................ TCCCTGAAGCATGGCGGCGCGGCAGGCGTTCC 785168 28 100.0 32 ............................ CAGGTATTTCAGCGACAACCACAGAAGCGCGT 785228 28 100.0 32 ............................ TTCACATGACAAGTCGATAAAAGGGAATGACA 785288 28 100.0 33 ............................ AGCAGCGGCGCTGAGCGTGACGCCGGGCTGGTC 785349 28 100.0 32 ............................ ATGGTAAAGGCGACAAATCCAGCCAACCCTAA 785409 28 96.4 33 ...............T............ AATGTGGGGATGACTTGCGCTCGGAGCACAGAT 785470 28 100.0 32 ............................ AAGAATGCTACTGACGCCGCCGGCAACTCCTG 785530 28 100.0 33 ............................ CATACAAAGGGCCGTAGTGGTGTTGTTCACTAC 785591 28 96.4 32 .............A.............. TGGCTGTACCCGTCTGCATCGAGACGCGCAGC 785651 28 100.0 32 ............................ GCCCGGGTTGAGCGTAGACTTACCTTCTGTTT 785711 28 100.0 32 ............................ ATATTCACGGAGAGCTTTGGCGCTTCGTCAAT 785771 28 100.0 32 ............................ TGACGAAGAATGCCCCGTCTGTTAAGGAGGGC 785831 28 96.4 0 ...............A............ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGCCGCGCTCGGTAAACTCGAAGAGAGCCGATGGCGAGCGGGCTTGAATGATTACTGTCGTGCGACGGCGATCCTGGCGATACCCGCCAACACTGGCTGGCGCGTGGTCAGCCGTGTGCAGGTAAAAAGCAGCGTTGAGCGTCTGGTTCGTCGTTCATTACGTAAGGGCTGGATAACTGAAGAACAGGCGCAACAGCGAATAGCGGAAGGGAAGGACAAGCGTTGTCATTTGCCATTTTTACCGCTTAGAAGTTTGTCTACGGGTCAGAGCTTTAAGTTATTTATCCGCCACAGTGAAATACAAACGGCGCCAGTAAGTGGTTCGTTTAGTAGCTATGGCCTGAGTGACACGGCAACAGTCCCCTGGTTTTGACCCTTTTTTTCGTGATTTTATAACTCGTTGATTTTTAATGGGGGATAGTGACGGTCAGAAAAAAGGTTTAACGCTTGAAAAGGGGGGTTATATAACAGGATCATAGGGATAGGTACTTTGGGTTCCA # Right flank : AAAAGTGGCCCCCGATATCGAGGAGCTGAAATCGTTCACTACCTATTCCATTGCCGATTCGGTACAGGCACCCATTTTTTTGCCCCGCCTGACTTATCGCCAGGCGGGGCATTTTTACGTCCGCACCCGCTCAACCGTCTCCTGCCAGGCTTGCCAGCGGGTCTGCAGTCGGGCGTGGCGCGCCATATCCGGGGTAAAAGTGACATGCTCCGGCAGATACTGTCGCAGCTGCGTGGTAGTCAGGTTAAACAGCGCCTTACGGGCCAGCAGGGCGGCCCCCATGGCTGAGAGTTCCGGCACGTCACTGCGCATCACCGGGCAGCCAAGCAGATCCGCCTGGTACTGCATCAGCCAGTCGTTTTTCGTCGGCCCGCCGTCGACCATCAGCGCATTCAGCGTAAAGCCCGGATGGACGCGCATCGCCTGCACCACGTCAGCAATCTGATAGGCAATTGCCTCCAGCGCCGCACGGATCAGGTGCGCCCGCTTCACGCCCCGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //