Array 1 26303-24617 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAMC01000022.1 Neisseria meningitidis strain Neisseria meningitidis isolate 99661, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26302 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 26236 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 26170 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 26104 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 26038 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 25972 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 25906 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 25840 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 25774 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 25708 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 25642 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 25576 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 25510 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25444 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 25378 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 25312 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 25246 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 25180 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 25114 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 25048 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 24982 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 24916 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 24850 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 24784 36 100.0 30 .................................... AGAGCGCGCTGAGGCGTTCGTGGGTTTGGA 24718 36 100.0 30 .................................... TTGGTGGTCGCGCGTGTTAGACGGCAGCTA 24652 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.4 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //