Array 1 3013-2792 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCID01000012.1 Enterococcus hirae strain L22 NODE_12_length_85656_cov_41.197196, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3012 36 94.4 30 ..........................C........C TTTCGCAAGCTCTAACCACTCGTCGTCGTT 2946 36 100.0 29 .................................... GTAGAAGCGTTGTGCTTTACTCGATCGCT 2881 36 66.7 18 .......TTT.G....A......G..C.GA.CTC.. CAACTATGATAAGAGGTA Deletion [2828] 2827 36 75.0 0 .C.......T................AA.GA.G.TG | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 84.0 26 GTTTTAGAGCTATGTTGTTTTGAATGTTTCCAAAAT # Left flank : ACTAAAATCAAGGATTGATCAATTAACCACCAAGGTTCAGGAATGGATTAGTGAGGAACTCTTAGAACATGAATTAGATTTAGTCTGTGAAGAAATGAGTATGGTTGAGCTATTCAAAGCATTAAAAATAAGAATTACGATGCAACCAGAATCAATCTTTCAAAAAATAATGGAGATTTTACAGATTTATAAGTATCTAGTGAAAAAGAAATGCTTGGTTTTTATCAATGTTGGAGCGTACTTAACAACCACAGAAATGGCTGAACTACAGGAATATATTTCTTTGTGTCATATGCCTGTCCTTTTTATCGAACCACGAAAAATAAAAGGATTGAAGCAAACTGTTTTAGATCAAGACTATTTTTTGTGTGAAGAAATGTGGTAAAATAAGAACAATCAAAATAACAAAAAACAGCATGAATGAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCGCGATTACGAGATTTCGTGAGAAAAAAATTTTTCTGCGAG # Right flank : CCTACTTTATCATGAAAAGTAGGCTCTTTTTTTACTTATATATAGGAAAGTGTCTTCAGTTGTTGAATCTGCTAAGTTTTGATCATTGAAAGGGGGAATCGTGCCTTTTAAAAATGAATGGGTATGTATACGGAACAGGACACAATTGTTCAGTCTTATCAACATTGAAACGAATTCATTTTCTCAAAGAAAAGATGAGTTGCTAATTTCGTGCTTTTTCTCTATCATCAAACAGTAGGCATTTGTTCGTGAACTAAAATGAATGTGAGAGGGGACAGTGAGATGTTTGATACAAATTTGATAACTTATTTGGACTGGTTGATCGCAATTTTGAATATTGCTTCAATCATTATTTTGCTGGTAGGGATTTTTTTAGTCTTAAAAAATCTTTTTGACTGGCACCCACTGAAAAAAGACTACGAACAGCGTAATTTCCGAAATGCGGAAGTACGCAAATTATTGGCTAGTTATATTTTGCTGAGTCTAGAGGTGCTAGTGGT # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.20, 5:-1.5, 6:0.25, 7:-0.49, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGTTTCCAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //