Array 1 2864928-2865079 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018627.1 Streptomyces hygroscopicus strain XM201 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2864928 29 100.0 33 ............................. CACCACGCCGGAATGCTCCCCACCTTCAAGGAA 2864990 29 96.6 32 ............................G ATGCCGCGCGGGATAGCCGCTCGCGCGGGCAG 2865051 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 3 29 98.9 33 GTCGGCCCCGCGCCAGCGGGGGTGGTTCC # Left flank : CAGGTCGGTCCCCGTAGCTCAGTGGATAGAGCAGGCGGCCTCTAAACGCTTGGCCGCAGGTTTGTGTCCTGCCGAACCCTCCCTGCGTGCCCTCGTTACGCACGTAGCGGCCTGGGCCGTCGGGAATACGGGGAATTGGGTGCGACCCAACAGCTCATCGGCCAGGTGTACGCGACAAGCTGGGCTCGTTCCGGCCAGCGAAGATCGTAGCGAGAGGTCGCGTCCGGTTTGCATACATTCACCCAGCTCCTATGAACCTCACTCATTACCGGAACCTGGTGAACCACCAACTGCCAGCATGGGAACGACCTGCACACCCGCTGCTCCCGTCTCCCTCAGCATTCACCTTCGCGTTAGACCTCGCCTCTGAGAACATCTCCAACATGACCATGAGACCTCGTATTCATGACCGCGCTAGATGGCTCGCTGGCGCTGCTCATGCCGGCGTCCAACTGAATGAAAACGGCATTGATCGGGAGTAAAGTTCCAGGTCAGCAAGG # Right flank : CAGTGGTGTCGTACTCGCCGAAGAAGCTCGGCTTCTTCTGAGCACCTTCACGCCCCGCTCTCCCCGTGCGAGGGGAGAGCGGCCGCGTGCGCCTCATGGCTCCAGTCGGTGATCCATTGGGGGGATGTTCGGCGGCGGCATCTCCGCTGTCCGGAGCCGGGCCGGAGCCGCGGGCTAGCGTGGCGACACTGCCAGTGTGCGGAAGCTTCCTGTGGTGCGGAACGGCCGTTCGCGCGCCCTGGCGGTTCCAGGGAGTGCGATGAGGAAGGGCCTGACATGTCCAACCACTTCACCGGCCTCAGCCTTGGGCCACCGCTCGGCGACCAGCGACTCGACCTGTGTGACCTGTACGCCTTCCAGGCACCCGGCGATTCGAGCAGGACCGTTCTCATCCTCAACGCCAACCCCAACGCTGACGCCCTCCACCCCGATGCCGTATACCGGCTCAACATCGACAACGACGGCGACTACCTCACCGACATCGCCTTCAGCTGGGTCTT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCAGCGGGGGTGGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4680782-4680567 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018627.1 Streptomyces hygroscopicus strain XM201 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4680781 29 100.0 32 ............................. GGCCTGGGACAAGATCAAGGAGAACACGAAGA 4680720 29 96.6 32 ...........G................. GTCCACTCGTCCGGGTTGATCCTTCGCATTGG 4680659 29 93.1 32 ...........GG................ TACGAGCAGGACGTCATGCAGCGTGGCGCGAT 4680598 29 89.7 0 G...........T...............G | C,A,G [4680570,4680573,4680576] ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CAAGGTCAAGAGGAGCCGCCTCACGGCGGCTCTGCGCGGACGATCGAGGGCTGCCCGCCCGAGTCCGCGGGTAGACCGCACGAGACCGGCGGCAACGCCGGTCCTAGATGGATGGCCGCCTCCCCATGGGCCGCAAGGCCCACGGGAGACAGAACCCGGCGTACAGGCCGACTCGTCCGCCACCACCTCTCTGACCTGGGTATACGCCCCGGCCGGGCGCGCCGACTGTACGGCGGCCCGCCCCTGCTCCTCTCCAAGGCCCTCCCGGGTCTTCAAGGTTCCGGGGGCGAAGCTGCTTCGCTTACGTAGCCCTCCATGGCAGGCAAGCGACGCACACCGGGGCGCTGACGGCTCTCCCGCTTCTGCGGGACGATTCGGCTGGCGTCGAAGCCCCCACGATGCGGCTCGCGGAAGTGGTGGGCCGTATGTCCTGGATGCCGGACTCGGGGAAAGTGCTTTGCGAACCACCTACTCTGAGATAAACATGCAGGTCGCAGAGT # Right flank : CCGCTGCTCGGTGGCGGACGACGGCGGTGTGCGTTCCCTGTTCCCCCTGCTCTCCTTGCTTCGCCTGCTCCTCCCGCTTCCCCGCCGGGAAGCCCGTGGCGGGGGCGAACCGATCGGCCGCGGGACTGCCGATGATCTCCGCCGCGGGGGCGTACCCCGACAGCCGTCGAGCTTCCGTGCTCCACGCCGTCACGCTGCCGCCGGGGTCCGTGAGGGCGATGGCGGCTGACGTGTCGAGAGGGTCGCCGATCGTGTCGGGGCCGGTCGGCCGTGTGCGTCCGGTCTGTCCATGGGGTCCTGCCTTGTCCTCCTCTCACGGCCCCGCCCGCCTCAGGGTGGCAAGGCGAGCCTGTGACGTGAGGTGCTTCACGGAAGCGGGTGACGTAGCGAGGGGCGGGGCTGGGTACGCGCCCGCGTGATCACCGCTTGAGATACCGATCTGGTCGGTACATATAGGGCGAAAGCATCGTTGGAGAGGAGGCGACATGTCGTCGAAGCGA # Questionable array : NO Score: 3.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //