Array 1 2065-821 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FXQB01000022.1 Klebsiella pneumoniae subsp. pneumoniae strain 3189STDY5864884, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      2064	    29	 100.0	    32	.............................	GGGGCCAGCTCCCGGACGAGAAATGTGACGCC	
      2003	    29	 100.0	    32	.............................	CGATTACGGAGTCGTTCACAAACCGACCACCG	
      1942	    29	  93.1	    32	............TG...............	TTGCGGACGTTCAGACGCTGCATGGCGTTCTC	
      1881	    29	  93.1	    32	............TG...............	TTATCAATGGGGAAAAATCTTCATTTGTAACT	
      1820	    29	 100.0	    32	.............................	AATCCTGGAGCTGGAAAGGGAGCTTGCCTCGC	
      1759	    29	 100.0	    32	.............................	GCACCCTGGGATGCCTTTTGCACAGTGTCAGG	
      1698	    29	 100.0	    32	.............................	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
      1637	    29	 100.0	    32	.............................	CAAAAATGCCAGGCACTGACTAAACCGCCGTC	
      1576	    29	 100.0	    32	.............................	GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG	
      1515	    29	  89.7	    32	A...........TG...............	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
      1454	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
      1393	    29	  89.7	    32	............TGA..............	CACTACCAGATCCGAATGGACACCCGTAATGA	
      1332	    29	  96.6	    32	.............C...............	GAATGAGAGCAAAATAATGAAATTAACAGGAC	
      1271	    29	  93.1	    32	............TG...............	CTAATGAGCGGTATATTTTTTCTAATCTGAAA	
      1210	    29	  96.6	    31	.............T...............	TGACTTTTAAAAAAATCAGCTGAAACAGCCG 	
      1150	    28	  89.7	    32	.....-......TC...............	TGCGTGCAGTAAACGAAAATACATCGGTCAAT	
      1090	    28	  89.7	    32	.....-......TG...............	AATGGTGACAGGCAGTGCACCGGCCTAGAGGC	
      1030	    28	  89.7	    32	.....-......TC...............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
       970	    29	  93.1	    32	............TG...............	TAAAAGCGTTTTACATGCATTCAAAAAAGTTA	
       909	    29	  93.1	    32	............TC...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
       848	    28	  82.8	     0	..........A............-.C.TT	|                               	
==========	======	======	======	=============================	================================	==================
        21	    29	  94.3	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTGCCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAATTCCAAAAGCTGGTGGATTTTAGTAGTGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CACAAAGTCACAACAACAGTCAGCAAAAACCACGCGATGATCGTTATTGAGGATTTGAAGGTTTCCAGCATGTCAAAATCTGCAGCGGGTACGGTAGATGAGCCGGGGCGCAACGTTGCGGCAAAATCAGGTCTTAACCGGGCGATACTGGATCAGGGCTGGTACGAAATGCGCCGCCAGCTCGAATATAAGCAGCGCTGGCGTGGCGGGGAAGTGCTGGCAGTAAATCCGGCCTACACCAGCCTGAAATGCGCCTGCTGTGGTCATACCGCGAAGGAAAACCGTCAATCGCAGGCAGTATTTGTCTGCGTGGCGTGTGGTTACGAAGCGAATGCTGATGTAAACGGCGCGTGTAATATTTTAGCGGCAGGACATGCCGTACTTGCCTGCGGAGGGACGGTGCAGTCAGTCCGCCCGATGAAGCAGGAACCTGGCACTGAGCGATCAGTCGTCACCCACTAATAATGGGAATCCCCCTCCTGAATCTCGCAGCGTGAAGG

# Questionable array : NO	 Score: 5.45
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [30-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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