Array 1 45838-47341 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAI01000009.1 Bacteroides caccae strain 2789STDY5834880, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 45838 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 45915 47 100.0 30 ............................................... CTATCGGTCTGAACTCCACCATGCCCGGAT 45992 47 100.0 29 ............................................... AGGTAGATTAAAGATTAATATTGCAGCGG 46068 47 100.0 30 ............................................... AGTGAATCTTTGCAAGACGAAGAAGAAACA 46145 47 100.0 30 ............................................... ATACACATAAGTATTACGTGCGCCAGGTTT 46222 47 100.0 30 ............................................... TGGACGCTTCGAAATATGATAGTGGACTGC 46299 47 100.0 30 ............................................... TCTTTTGGTGTATGTACTGATTGGCAAAGG 46376 47 100.0 30 ............................................... AAAGTCTGAATGCAGCAATATTGATGTTGT 46453 47 100.0 30 ............................................... CAAGGCTTTGGGAAGTGGTAGTAACAATCC 46530 47 100.0 30 ............................................... TAACCATCGAAACGGCACTTGCATCGTTTG 46607 47 100.0 29 ............................................... AGAAGAGGCAAAAAATGAAGAGATAGATA 46683 47 100.0 29 ............................................... AGAAAGAATATTGTAACGGTGCTTGCTGA 46759 47 100.0 30 ............................................... ATCTTCTCACTGGAGAAGGCAGCATGATAA 46836 47 100.0 29 ............................................... TGTAAATAACACAACATAACATTTAAATT 46912 47 100.0 30 ............................................... GGTGAAATTTCCGAGGAAAAACAGAGAAAC 46989 47 100.0 29 ............................................... GAGAAGGCAACGACGACCATAATTGTTGA 47065 47 100.0 29 ............................................... AGTATCATAACGATAACCATATTTCTCAT 47141 47 100.0 30 ............................................... TAAAACCGTCCGTTCGGCACATTGCATCGG 47218 47 100.0 30 ............................................... GGATGCGGACTGGGCGGAACTTGGTAACGA 47295 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 98.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : GCTTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATGCAAAAATGTATGAATTGAATAATTTGAGCTATAGAACAACATATTATGGGATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCACCATTAGGCACTGTATTTCAATCAGTTAATTCACAATATAGAAAAAGAAAATGAGCTGTAAATTCTTTAAAAAATCCCGTAGCCTCACGGGATTTTTTTATTCAAAATAACTCTAATTGCTGCCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //