Array 1 67177-70389 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010901.1 Moraxella catarrhalis strain MC6 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================ ================== 67177 28 100.0 32 ............................ AATACGAAAAGATGCCAAATTTTATGCGTCTG 67237 28 100.0 32 ............................ ATGCAACTGGGAATAGTGGTTCAATAATCTTA 67297 28 100.0 32 ............................ GTCATAAAGCCGATAAACTTTTTCTTTTGGTT 67357 28 100.0 32 ............................ TTCAAAAGCTCAAGCACACTATCATCATTAGA 67417 28 100.0 32 ............................ ATCAAGCGTTAATAGCTTAAGCGACAGTTTAG 67477 28 100.0 33 ............................ ACTGAGCGTAACCGCATTACCGCCGCCATCTTT 67538 28 100.0 32 ............................ GACACGGACGAACACGAAAAAAACTAATCGCC 67598 28 100.0 32 ............................ CAAAACTTCAATTTTGCCTATCATCAAGAACC 67658 28 100.0 32 ............................ AAGGTGAGATAATGATAAGAGTTGATAAGTGC 67718 28 100.0 32 ............................ TTTGACAATCATCGTATGTGGCTCAGGGGCAA 67778 28 100.0 33 ............................ CACCAAAACCTTGACACGGTCAGGATTTAGCAC 67839 28 100.0 32 ............................ GCCTCTTCCAATTTTTTCTTCAATGCTGCTTT 67899 28 100.0 33 ............................ ATTTTGATTTTTGAAGCATTGAGCGAATCTGAG 67960 28 100.0 32 ............................ AAACAAGTCGGTGAGATTATTAAGCCATTATT 68020 28 100.0 32 ............................ ATAGTTTCCGCCACAAAGCAACCGCCATACCT 68080 28 100.0 32 ............................ ATCATAGTTAATGACTTCTTGCACACCGTTAC 68140 28 100.0 32 ............................ AATTGGCGTACGCAGTGATTGGTCAAGATGGC 68200 28 100.0 32 ............................ ACGCTCTAGCTTGATCTTATCAATGCGACTTT 68260 28 100.0 32 ............................ GCACACACCTGACAGCCAACACTCAATCAATC 68320 28 100.0 32 ............................ TAAAAGCTCATAGTTAAGCTGAGTTGCGTGAA 68380 28 100.0 32 ............................ TGTTGAAAAAATCTTTAGTACGCAGGATAGAT 68440 28 100.0 32 ............................ AACTTACTGAGCTTTCGACTGTTCTGATGCGT 68500 28 100.0 33 ............................ ATGGCAGTATTATGAAACGGGCAAACTTATCAT 68561 28 100.0 32 ............................ GCACGAAATACACGCATTACCATGTTCGCTTG 68621 28 96.4 32 ...........T................ AACTAGGAGAAATCTCATGGCAAAAGTTGTAG 68681 28 100.0 32 ............................ TTGATGTACTAAAGTCGTGTTAATAACATAAT 68741 28 100.0 32 ............................ AAGCATTAATAAAATTCCAAGCATTGAAAGTG 68801 28 100.0 32 ............................ AACTTTTTAAAATACTGCTTGATGGATTCATC 68861 28 100.0 32 ............................ TACTTTAAATAATTGATTGTTCATAGTTTTAA 68921 28 100.0 32 ............................ AGTATTTGTATTGATTGATGGTGATTGAGTGC 68981 28 100.0 32 ............................ GTTGAGCTGTATCCTCTGATTCTCTTATTGAT 69041 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 69101 28 100.0 31 ............................ GTCAAAGACTCGTAAAAAACAGGCGTTGAGA 69160 28 100.0 32 ............................ ATCAAGACAAGAAAGCTTGATGAAACTGAAAC 69220 28 100.0 32 ............................ TACCCTACCAATAAGCATGAGATCACTGGCTT 69280 28 100.0 32 ............................ AGAGCTGACCGCCCATTGGGTTTTTAGCACAT 69340 28 100.0 32 ............................ TAAAGGTGTTGGCAATGTTACTTATCATAAAT 69400 28 100.0 33 ............................ CTATTTACCCACCTTTCGTGAGAAGCCTATCGG 69461 28 100.0 32 ............................ TGTTGATACCTTACGCCTAGAATTCCCCAACG 69521 28 100.0 32 ............................ TTGCTTTGTTGTTAACGCACGCTCTTTTTCTG 69581 28 100.0 32 ............................ AGTTGAAAGCTCTGTGAGTGGTAACACATCTA 69641 28 96.4 32 .......G.................... AAATGATGGCGAAAACTGGACAATCATTGATG 69701 28 100.0 32 ............................ GGTATTTTTACCAAAGAAGGCACGGCACAAGT 69761 28 100.0 32 ............................ GAAAACATGGGCTTTTTATCGCCGTGCGGACT 69821 28 100.0 32 ............................ TACAACACTCACAGGCTATGGTATTGGTAATG 69881 28 100.0 32 ............................ TTACACGCTACTGACCTACATTTGGGTAGGAC 69941 28 100.0 32 ............................ AGTTTCAAAATATCAACTTCCCATAGTAGCTT 70001 28 100.0 32 ............................ CGTAGCATTCAACGCATCAATCGTATTTTTGA 70061 28 100.0 32 ............................ TTTGCCATAAATCTCACGCACGGACTGCCGTC 70121 28 96.4 92 .........................C.. CGCCACTTGGGCAGTGGGTGGCTGAATCATGGTAATTATTTGGCGTATGGTTTGTAGAAACGCCACTTGGGCAGTGGGTGGCTTGGCTTGTT 70241 28 100.0 33 ............................ AACCGCTTTAAATGCAACAGATAAGGCATCTGT 70302 28 96.4 32 .....T...................... TGGGGAAGTTAGGCATTTAAAATGGCAGGATA 70362 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================================================================ ================== 53 28 99.7 33 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGACGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGCGCCATTAAAGATACTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //