Array 1 44-620 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSLG010000110.1 Raoultella sp. 18098 isolate 18098_WYC41_B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44 29 100.0 32 ............................. CAGCCGCTGCAGATGGTGGATGGCCTTGCGGA 105 29 100.0 32 ............................. AAGAGTCCTCGCGGGCGAAGAGGACCGACACA 166 29 100.0 32 ............................. ACGCCGACACCGAGCCCGGCCAGGATGAACCA 227 29 100.0 32 ............................. CTGGAATGCCATCAGAGTCCCCGCTTGATGAA 288 29 100.0 32 ............................. GGCTCCACATCCTCTTCGGGAAAAAGCACGTC 349 29 100.0 32 ............................. CTGTTCGGCGGGGGCGCGTGCCCGGCCGACAA 410 29 100.0 32 ............................. GCACCTGCCGGCACCATGCCCAGCGGTGAGGT 471 29 100.0 32 ............................. CAGCACCAGAACCAGAGCCGGAACCGCCTGAG 532 29 100.0 32 ............................. CCCTGCCGCGCCCGAGACCTCTCCCCCAGCTG 593 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.7 32 GGTTCCCCCGCATGCGCGGGGATAGGCCC # Left flank : GGGATAGGCCCCAGTCGCGGCGGCTTCGGCGCAGGACCTGATCG # Right flank : | # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCATGCGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [20.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 264099-264615 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSLG010000003.1 Raoultella sp. 18098 isolate 18098_WYC41_B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 264099 29 100.0 32 ............................. GCCCCGTTGACCTGCTTATCGTCCTTTTTCGC 264160 29 100.0 32 ............................. ATTGTTTTTCTTAAAATGTTTACGTTGGATCA 264221 29 100.0 32 ............................. CGCGATGTTGAATTTGCGTCAGGATGAAAGCC 264282 29 96.6 32 ............................A GCTCCATAAAAATCGCGCCGAGGAAATCATGA 264343 29 100.0 32 ............................. TGATGATTCAGGATGCGTTTATTCGATTACGA 264404 29 100.0 32 ............................. ACACTCACACCGGTTCAGATCGCTGACGCAGA 264465 29 100.0 32 ............................. GCGACTGTTAACCAGCGGCTGGATACATTAAC 264526 29 89.7 32 .T........T................A. ATGATCTGGATAAACTCCGCGAAGAGTATGAA 264587 29 79.3 0 TG.......A.C.......AT........ | ========== ====== ====== ====== ============================= ================================ ================== 9 29 96.2 32 GCGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TAAGCAGGCGTGGTCGGAATAAACGAAGCCGGTTCCTCGCAGCTCTTTTCCCAGCCAACCTTGCCCGGCCTGTTCCTGCCATTCTGGCGCTAAAATATGCAGTATCGGTGGCTGACGTTCATCGGGCAGTATCGCTTTGCGTTCCCCACCGGCAGTGCGGATATGGCGCTGAAGTCGACCGGCGCGCTGGATCAACAAATCTATTGGCGCCAGATCCGAGATCATCCAGTCAAAATCCAGATCGAGGCTTTGTTCGACAACCTGAGTGGCGATTAACACTTTCCCCCGCCGCGCTGAAACGGGGGCATCTTTACCGAACCAGCCGAGGGTTTTATTCTCAATGGCAATACGATCGGCAAAGGCGAAGCGGCTGTGGAAAAGTAGCAGATCCTGTTCAGGGATGCGCTTTTCATGCAACAGCTGCTGATAATCTTCGCGTGCTTCATCAACCGTATTACGGATCCAACATACGCATTGCCCGGCTTCGACTGCACGATAAA # Right flank : GCATTGTGCATTACTGCCAGATAACGTAGGAACGTACTCTTCCACGGCTGCAGCAAAACGCCGGCTAGCCGTGCTTATTGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGCTCGATGCGGCCGGGCAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCAGATGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCGAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGTCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTCAGCTTGCGAATCGCCGCCGGTGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGGTTA # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.90,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //