Array 1 11-222 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKVW01000773.1 Klebsiella pneumoniae strain AS012368 AS012368_773, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11 29 100.0 32 ............................. GTAACCCATCTATTCTCAATTTGTCGACTAAT 72 29 100.0 32 ............................. GAAACCGCGATCACCCAATTCGGGTTGAACGC 133 29 100.0 32 ............................. CGCTGGCGAGCCGTCATAGATGTTCAGCCGGA 194 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTGTGCCCCGCCTGCGCGGGGATGAACCG # Left flank : GGGGAGGAGTG # Right flank : ACTGGCAACACGGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGCCCCGCCTGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCCTGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [5.0-10.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 70317-74244 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKVW01000010.1 Klebsiella pneumoniae strain AS012368 AS012368_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70317 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 70376 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 70437 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 70498 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 70559 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 70620 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 70681 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 70742 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 70803 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 70864 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 70925 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 70986 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 71047 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 71108 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 71169 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 71230 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 71291 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 71352 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 71413 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 71474 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 71535 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 71596 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 71657 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 71718 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 71779 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 71840 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 71901 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 71962 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 72023 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 72084 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 72145 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 72206 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 72267 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 72328 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 72389 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 72450 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 72511 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 72572 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 72633 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 72694 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 72755 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 72816 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 72877 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 72938 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 72999 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 73060 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 73121 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 73182 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 73243 29 96.6 32 .............T............... GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 73304 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 73365 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 73426 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 73487 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 73548 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 73609 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 73670 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 73731 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 73792 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 73853 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 73914 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 73975 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 74036 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 74097 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 74158 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 74216 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //