Array 1 22098-23956 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000023.1 Streptomyces sp. ventii NODE_23_length_39445_cov_66.927754, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22098 29 100.0 32 ............................. CCGCGCGTCCCGCTCCGCCGTCCCGGCCCCGA 22159 29 100.0 32 ............................. TTCCCGCGTAAGCGAACCCGCTGGTCAGGCCA 22220 29 100.0 32 ............................. ACGACGGCGGCGGCGAACCCGATGCCGCCGCC 22281 29 100.0 32 ............................. CCGTCCGCGAACCGGCGCAGCACCGCCCGGCG 22342 29 100.0 32 ............................. GACCCGTCGGACGCCCAACGGGAGTTGAGCAG 22403 29 100.0 32 ............................. AGCTCCACGCCGGAGCCGTGGATGCGCACCGG 22464 29 100.0 32 ............................. CCCCGGCGGAAGCGCGGGGGTTCGGGGTTGAG 22525 29 96.6 32 ............................T CGCGCGAACACGGGGGGCTCCTAACGAGGTAT 22586 29 100.0 32 ............................. CTTCAGTGAGACCGCTCAAGCTTCGGTGAGAC 22647 29 100.0 32 ............................. GCTCCCCCTCCCAGCAGCATCTGCCGCCGAGG 22708 29 100.0 32 ............................. GCCAAGGCCCAGCAGGACGAGCTGTACGACTG 22769 29 100.0 32 ............................. TGGGCCGGAGACCCCATCTCGTCATGGGTGAA 22830 29 100.0 32 ............................. GCGTACAACAAGATCGCCTACCCGGAGCTGAT 22891 29 96.6 32 ............................G AGCTGATGAACTGAGCGGTGCACCGTCTGTCG 22952 29 100.0 32 ............................. GCTGCGGCAACCTTCAAGCTGAAGATGACGCT 23013 29 100.0 32 ............................. CGCGGCTTCGCCAGGCATCCGCGGTGCGACTG 23074 29 100.0 32 ............................. TGCTCCGCGTGGATGCCGACGGCGACACGCGC 23135 29 100.0 32 ............................. TTGCAGACGGCCTGGGGCAGGTAGACCGTCGC 23196 29 100.0 32 ............................. GCCCTGCCGCCCACTACCGTCACCCCGTGGAC 23257 29 100.0 32 ............................. GGCAAGGGCGTCATCCTCAACGTCTTCCGGAC 23318 29 100.0 32 ............................. GGGCAACGGGCAACCCCCGCGACCGGGTTGCA 23379 29 100.0 32 ............................. GACGGCGGCGTGCGGCGCGGAGTTGGACACGG 23440 29 100.0 32 ............................. GTGCCCGCCACCTTCGGCGGCCGATTCGTCAA 23501 29 100.0 32 ............................. ACCCGTGAAGTCGCCGCTCTCCGGCTCGATCC 23562 29 100.0 32 ............................. CGGCTCGGAGAAGTCGTCCCCGATGGACACGG 23623 29 100.0 32 ............................. GCGGTGGCGTATGCCTGCCCGTGGTCCCGGCC 23684 29 100.0 32 ............................. CAGCCGGGGCCCATGGAGCGGGCACGGTCCTC 23745 29 100.0 32 ............................. GGGCGCTGCGCGAGTGGGTGCGTGCGCACGCC 23806 29 100.0 32 ............................. CGACCCATGCGGAATTGACGAATTCGTCAAAG 23867 29 100.0 32 ............................. ATGGCGTCGCGTGCTCGTCGTGCTGGTCTGCC 23928 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.8 32 CTGCTCCCCGCACACGCGGGGGTGTTCCC # Left flank : GACGACCGGCACCTCGGCGGCCTGGCCCGCGTCTGGCTCACCGAGCGCGGCGCCGCCGACGTGCCGCCGCCGTCCGAGGAGCTGATCTTCTGGCTCACGGTCGACACCCTCGCCGCCCAGCTCGACAACGAGGACCCGGCCGGGCTCCAGGAGCTGGTCAGCGGACTCTCCGCGCAGCACAGCAGCTTCTTCGAGCACGCCTGGCAGGTGGACCACCCGGCCACCACCGAGGTGCTGGAGGCGGTGGGCCGCCTGCACCCGGACGAGTCGCTGGCCAAGGAGGCCCGCGCCGCCGCCGAACGCGCCCGCAGCCGCACCACCGACTGACCCCGCGTAGCGCCGCATGCCGACCGCGCCGCCCCGGACCGGGCACCGAGCCTCGCCCGGGGCGGCGCGGGCGCGGTCGGTTGGCGCGGGGGAGAGGAATGGGAGAAATGCCGGAGTTTGGCAAAGTAAGTAAAATCCTGTTACTCGCCAGTTAACGCACCAGGTCACGCACT # Right flank : CCAGTCCTCATCAAGCGTGTCCGGGACAGCGCCGAGCAGCCGCAGCTCTGCCCAGACGTTCTCGTGATCACCGCTCAGGTACCGGTGTGTAGAGGACGTCACCGACGCACCTTGCCCGGGGAAGCGTTCACGGGCAAGCCGCGATGGCCGGCGGGCCGACCATCCGCCCACGGCGGCTCATGCGAGCGGTCCGCCGGCCTCAGATGTGAAGTTCCGGCGGGAGGCCGGTCCAGCGGATGTCCGCTGGGAGGTGGCCCGTGTCGTTGAAGAGGAGCACGGTGGCGGGGCGGTCCGGGGCGTAGCGGATGACGGTGAGGCCCGCGTTGGCGTGGTTCATGCCCATCCAGCGCCAGTTCGGCGCACTCATGGCGGCTCGCACGAGCCAGCCGATGAGGAAGGCGTGGGTGACGACGAGTTCGTGTCGGGGCTCGTCCCCGGACACCGGGCCGGTGAACGTCTCGACCGCTGAGGCCGCGAGTGCTGATCCGGTCTCGCGTTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9342-9500 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000116.1 Streptomyces sp. ventii NODE_116_length_15540_cov_91.155847, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================= ================== 9342 26 96.2 40 .....................A.... ACGAACGGCAGCCCGGCGAAGGCCACGAACGTCGGTTGCC 9408 26 100.0 41 .......................... GGCATCCCCCGCCCCGGGGAAGCCGGCTGCGGGTAGTTGCT 9475 26 96.2 0 ........................C. | ========== ====== ====== ====== ========================== ========================================= ================== 3 26 97.5 41 ACCCCTCGTAGGGGCGATGAGGACGC # Left flank : ATGCACCACATGGCCGACCCCGCGCACGCACTCGCCAAGGTCCACGAGTTGCTACCGCCCGGCGGCCTTTTCGCCGTCGTCGAACTGGACGGCTTCCCTCGGTTCCTTCCGGCCGACGCACCCGCCGAACGCCCCGGGCTGGAAGAACGCTGCCACCGTGCCACCGACAGCTTCCACGCCGAACACGTCCCCCATCGGGGCGCCGACTGGGGCCCGATGCTCTCGGGCGCCGGGTTCACCGTCGAGGACACCCGCACCATCGCGGTGAACATTGAGGGCGACCGCAGCGAGGCCATCGGCCGCTACGCCCTCGGCAGCCTCCAGCGGCTCCGCGACACGGCAGCGCCGGGCCTGGACCCCGCCGATGTCACCGCCCTCGACGCCCTGCTCGACACCGCCGGCCCAAACAGCATCCTCCGCCGCACCGACCTCACTGTCCGCACCACCCGCACCGTCTGGGCAGCCCGCAGGCGGTGAGCCGTGCGGCGACGGCTGGTGCG # Right flank : CCATGGTGAAGGTCCAGGTCAGGGACGGTGCGGCCGGGGTTGTGGGTGGGGTGGTTTTCAGCGGACCTCCGGTTGTGCTCGGAACCTCGGCGTGTCGCTGAAATTCGGGGCTGGCCGGGGGCTGGTGCGGGCTCGCTCAGGATGGCATGGGCGGGCGGGTGGAGGTGGGGCTTTCGGTGGGATTCGGCGGCGCCGGGCGGCCTGCGGCGTCCCGAATCGGTGTCCCAGCGGGGTGGTGTCTCTGCTGGTCAGGGGTGGTCCCGGCATCCCGGTGTCCCGGAAAGGGCTGTGGGGGTCGCGGCTGGGACGGGGGCGGGCGCAGGGTCGGTCCCGTCGAGCTCACCGCTCGGCGTTCCGACTGCGACTCCGACTTCGAACCCGAACCTGAAAGAGGTAGACGCCATGGCTTCCTCCCTTCCTCGCCGCCCCCGCTTCCGCACCGCCGTCACCGTCGCTGCCGCCGTCGCCGCGCTGGGCGTGACGACAGGGGTCGCCACCGC # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCCCTCGTAGGGGCGATGAGGACGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 40392-39697 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000002.1 Streptomyces sp. ventii NODE_2_length_86715_cov_68.976130, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 40391 37 100.0 37 ..................................... GCGGCGGCCTTGGAGCACATGAGGGGGCACACCAAGT 40317 37 100.0 36 ..................................... ACGCCGCGCGGCTTCGCCCGGTACGGCGTCGCCCCG 40244 37 100.0 36 ..................................... TACCGGGACCAGTGCAACATCCTCCGGAGGAAGCAC 40171 37 100.0 35 ..................................... GATGTGGTGCTGGACGTGGCCCTCTGGCGTGTCGG 40099 37 100.0 35 ..................................... GTCGTCGCCGGGGCGATCGTCGCCACCCACGCCCG 40027 37 94.6 35 ........T..........T................. AGTTGTGAAAGATCGGCCGTCGCAGGGGGTCCCGG 39955 37 100.0 35 ..................................... AGTTGTGAAAGATCGGCCGTCGCAGGGGGTCCCGG 39883 37 100.0 38 ..................................... TCGTCCAGCATCGAGTCGCAGCTGTCCCGGGCGGCGTC 39808 37 100.0 38 ..................................... TCGTGCGCGGTGAGCCCGCGCTCGGGGTCGAAGACGGT 39733 37 91.9 0 ...........................A......G.T | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 98.7 36 GTGGCGACCGCCCTCCGGGGTGGTCGAGGATCGCAAC # Left flank : CGGACCAGGCCTTCCTGCCACACGCACGTGCCCTTACCAACGTCGTGCACGAGAGCCAGGTACGCCGCAGCCTCACCAGCACCAAACACCTCACCAAACCGCCGCGCCAGCGCCGCCGAACCCCGCAGATGCGCCGCCAACTCATGGCGGACTCCGGCCCCATTGACACTGTGCGCATGCAACGCCCTGTCACCCATACAGACTCCACTCCCTCAGACGCGCACACCGTAAAGCACGCCACTGACACACATGCCGCACACGGCGAAAATCGCACGAAACAGGCCACTCATCAGGTAAAGAGCCCGCACAATCTCGCGGCCCTCAGGCTGCCCGGCATGCCAGACTGACCAAGGCAACACCCACACCGCCGCGCTTCGGAACCACAAGCGCACACACGACACTCGGATCACACCGAAGCAGAATGCCAGCAATGACCGATATCTCCCGGAGTCGGCTCGCTTCCAGGGCGGCACGTCAGGGCGAAACCGCAGGTCAGGCAC # Right flank : GATGCGCTGATCTCCGTGATGACGGGGCGGGGGCGGTCTCCGCAAGGTGGCCTGCGGCACGAGTGCGACAGGCGGCACGGCCGATGCCCCGGCGGCGGAGATGTCCACCGCCGGGGCCATGCCATTCCTCGACGCGAGCGCACCGGTGGGGACCGTCCGGGGTAGTGGGGTCATCTCGGAGCGCCTCGGCCCCATCACAGTCCAGTGAACTCGGCCGGCCCCGGGCGAGTCCAGCGGAATGGTTTGCAGCAGGGCCGGGCGACAGGCGCCAGGGCGCCTGTCAACGGAGCAGGATGAAGACCAAGGCGGACACCGCTCCTAGCGCAGTGCCGCATAGGAGCTGGGCGACAGTGTGTGCCTTGAGGACGCGGCGCGACCATCCGACGAGCGGCACGAGGAGAACTGCCGGGAGCGCAGGCGCGCCGAACACCAGCACGAGGATCATGACCGAGCCGCCGGCCACGGCGTTGTGAACGGAGATCTGCCACCGGACGGTGACC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGACCGCCCTCCGGGGTGGTCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.40,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 48896-53032 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000002.1 Streptomyces sp. ventii NODE_2_length_86715_cov_68.976130, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 48896 37 100.0 38 ..................................... CACGAGGTCGACCGCATCTGCCGCCGCCGGACCCGCAC 48971 37 100.0 34 ..................................... CTCAAGGCACACGGCCACCCGCCCTGGAGCGACA 49042 37 100.0 38 ..................................... CGGTCATGGGGTTGTCGCGGTCAGATGGGACGTAGGGG 49117 37 100.0 37 ..................................... CATGCGCCGCCCTCCCGCCTGTCGGCGCCGTCGCCCC 49191 37 100.0 36 ..................................... CTCACGACGATTCGTGTCTCCAAGCTCTCCACCACG 49264 37 100.0 36 ..................................... GCGGCGCAGAGGACGGGGCGCTGGAACATGCCGAGT 49337 37 100.0 36 ..................................... GCGGGGAGTCTCAGACAGGTGCGTCACGTACTCCGT 49410 37 100.0 36 ..................................... CGCCCGGCGTGATGGCCTACGGGATCGACGTCGGGG 49483 37 100.0 38 ..................................... CGCTCGCCAGACGCGCATGCGGGTCAGTCGGCCGCCGC 49558 37 100.0 36 ..................................... TTCATCGAGCTGAGCGAGTGCACCGACGAGCAGGGC 49631 37 100.0 37 ..................................... CAAATTTCCGACCGCCCGCGAGGCGGTCGGGGCGCGC 49705 37 100.0 35 ..................................... TTGGTGGCGGTCAACCTGCACGATCCTCGCGACGG 49777 37 100.0 38 ..................................... CAGGAGGCCGGCAACCGCACCGATGAGATGTACCACCG 49852 37 100.0 36 ..................................... CGCTGCGAGCGGGACGTGGGGGAGCTGCGCACCGTC 49925 37 100.0 37 ..................................... GCGTACGCGGTCCGGCGGTCCGCGCTCCACTCCGATG 49999 37 100.0 37 ..................................... GATGCCATCCGTGCCGAGTCGCTGAAGGAGCGGCAGG 50073 37 100.0 35 ..................................... GGCGAGACGGTCGCGGGCGGTGTCATCGAGCGGTG 50145 37 100.0 35 ..................................... CGTAGAGGTTCAGGTTCAGGAAGTGGGTGGTTGTA 50217 37 100.0 36 ..................................... GGCCATCACCTCGCGGCCGCCCACCATGCGGTGCAG 50290 37 100.0 37 ..................................... CCGCAGATCGCAGGGCCCTGCCACGTGGGCAGCGCAC 50364 37 100.0 36 ..................................... TACGGGCCTGGCGAAGCCCGGTTCGACGCGCACGGC 50437 37 100.0 36 ..................................... CGGGTGATCAGGGTGTCGGGGTGATCGGGGCCGAGC 50510 37 100.0 36 ..................................... TTCACGGCGTGTCCTCTCTCTACGTCGGGACGGCGG 50583 37 100.0 36 ..................................... TTCACGGCGTGTCCTCTCTCTACGTCGGGACGGCGG 50656 37 100.0 35 ..................................... CCCCGGGCGGTCCGCGTGTGCGTGCGGCTGGTCAC 50728 37 97.3 35 .......................C............. CTGAACCCCTTCCGTGGGTTGCCGGCGCCGCCCGC 50800 37 100.0 34 ..................................... CACCACGACCAGGACCAAGAGCAGCAAGGGCGGC 50871 37 100.0 36 ..................................... GGGGCGCGTCCCTTCGGGCGGCACCCGCCGACGGTG 50944 37 100.0 33 ..................................... GGGCGCCCGGCCATGTCCAGCAGGTGGCGCAGC 51014 37 100.0 35 ..................................... TCCGTTGGCCAGGATCTCGGCGTAGACGGCCGCTA 51086 37 97.3 35 .........................C........... TCCGATCCGAGACCACGTCGCCCCCGAGATCCGGG 51158 37 100.0 36 ..................................... GACGGCACCCGGAGAAGCTTCGGGGCCTCACCCCGG 51231 37 100.0 39 ..................................... CGGACCATCGGGTCGGGGAGGGTGTCGGACGTGACCCGG 51307 37 100.0 36 ..................................... TCGTCCTCGGCCGCGCGCCGCGCCAGGGCGGCGGTG 51380 37 100.0 35 ..................................... CGCTCGCACGGGTCGCCGATCTCGCTGGGCCCGAT 51452 37 100.0 38 ..................................... GAGTGAGCCAAGTTGACCTGCACCTACGAAGGTACATG 51527 37 100.0 38 ..................................... ATCGCCCACTGGGCGACGGCTGCGACGGCGAGCGCCGC 51602 37 100.0 37 ..................................... TGCGGGGCGTAGGCGTCGCGGTGCTCGGGCGCTCCGT 51676 37 100.0 37 ..................................... CTCCCGCTGCACGAATGGGTGGGGCTGGGGCCAGCGG 51750 37 100.0 37 ..................................... GTCGAGTGCTGGAGGAAGGAGATCGGGAACGTCGTAA 51824 37 100.0 38 ..................................... CCCCGACCCCACCACCACCGCCTGGTGGTGGGGCCGGG 51899 37 100.0 36 ..................................... TGGGCCGCCGTGAACGGCGCCGCCGCCGCTGAGGCC 51972 37 100.0 35 ..................................... GCGACGGCGGCGGCGCTGCCGGCGAGCAGACCCGC 52044 37 100.0 36 ..................................... AACGTCTCGCCGCCCTGTCCGCGCCTCCGCGCCGGG G [52064] 52118 37 100.0 37 ..................................... CGATCTGGTACGACCGACCACGACGCATCCTGTACAT 52192 37 97.3 35 .............................G....... CCCGTCGATGTCGACCGCGTCCACCTCGGTCACCG 52264 37 100.0 35 ..................................... CCGACCGCGACGAGGACCCCGATCCCGCTGACGTT 52336 37 100.0 37 ..................................... TTCTCCGTCCCGGTGGGGACCATGAGCATCTGGAACG 52410 37 100.0 39 ..................................... CGGCGCGAAGTCGCCCGGCTGAAGGGCAAGATGCCAGGT 52486 37 100.0 35 ..................................... CTCTCAGCCGATGAAATCGACCTAGAGTCATGGGT 52558 37 100.0 36 ..................................... CAGCCGTCGGCGTCGTAGCTCGTGTCGTCCTCGATG 52631 37 100.0 36 ..................................... GTGATCAACCGGGTCTACAACGACGGCATCCGCAAG 52704 37 100.0 35 ..................................... GAGTTGCCAGCGGTGGCGTTGCGGCAGCACGCGAT 52776 37 100.0 36 ..................................... TCCCGACCCACCACCAGGCGGTGGTGTGCCCGGAGA 52849 37 94.6 37 ...........G.C....................... CAGGAGAAGGTCGGCGCCTGGCTGCACCGCCGCTCCG 52923 37 91.9 36 .....A........T....A................. CATGATTTCATCTGCTGTCGCCACGGCGCGTCCCGC 52996 37 94.6 0 ..............T.....................T | ========== ====== ====== ====== ===================================== ======================================= ================== 57 37 99.5 36 GTGGCGACCGTCCTCCGGGGCGGTCGAGGATCGCAAC # Left flank : GCCCGTCTCGTCGCCCGCCACCTCCGCGGAGACCTACCCGCCTACCTGCCCTGGACGGCCACCTGATGGACCTCCTGCTCACCTACGACGTCGACACCACCACCCCCGAGGGCGCCCGTCGCCTCCGACGCGTCGCGAAGCTCTGTGAAGGCTACGGCCTACGCGTCCAGAAGTCCGTCTTCGAGATCGTCGCCGACGAAGCCGGCCTCCTGCGCCTCCTGGCCAGCATGGACGCCACCATCGACGCGGACTCCGACAGCATCCGGATCTACCGTCTGCCCCACAACGGCCTCACCTCAGTCGAGACCCGCGGCATCGCCCAGCTACAGTCACACCGTGACGACTTGGTCGTCTGACCACCCCCAGACCAGCTTCGGAACCCCAAGTGGACACACGACACGCGGATCGCACCGAAGCGGAATGTCGGGATTAACGGGAATGCCCCTGCAGAGTGCGAGTCGCCGCCGGCACCGTACAGACAACACCGCAGGTCAGATACT # Right flank : TGTCTTCGGAGCCGCCCTCGGCGACGTCCTGCGACCAGGTGGCGACCGTTCTTTTGGCTGGCGACGGTCTGTCCGCCGCAGTTGCGCAGCGCGCCGTTCCCCTACCGGCTTATCAGTTGACGGGCTCGGCGGCGTGGGCCGGAGCAGCGTTCGCCGCTGAGTGGGCCCCGCGACCGTTCGGCCTAGCCGGTCGGCGGACATCTCGCCGACCGGCTCCTGCCGCGCGTGGTGCTGCTGACCGTGGCGCTGATACGGGTGCTGGCGATGGCCGGAGGAGTCATCGCGCTTGCCTCTGGCGCAGGCGTAGCAGTGGCCTTGGCCATCGCGGGTCATCGAATATCCCAAGCGGGGCTTCGCCATCGAACAGGATGTCTCCGACGACGTACGCACGCCAAGGCAAAACTCGGCTGCCGCGCCCAGGTTCTGCGTACCGTTGTCCACCCGTCTCGCGGGCGCCGACCACGTCTCGCGCGCTACTGCGCCGGTCTGCCAGCCTCGGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGACCGTCCTCCGGGGCGGTCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 24810-22767 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000036.1 Streptomyces sp. ventii NODE_36_length_30282_cov_55.709559, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 24809 29 100.0 32 ............................. GACCGACGCCTTGGTGTCGGTCCGGGTGACCT 24748 29 100.0 33 ............................. GGGTCCGCCCCGCCGGCGGCGCCGTGCTCCTGG 24686 29 96.6 32 ............................A GCATCATCTACGACCTCCCGAAGAACGAGGGG 24625 29 100.0 32 ............................. TACTGGATCCACCCGGAGGTCGTGGGCGGGTT 24564 29 96.6 32 ............................T GGTTGACGCGCGGTACATGCTGATCGTCGAGG 24503 29 100.0 32 ............................. TCCTTCCCGCCGCACGCACATTGGTCGTACTC 24442 29 100.0 32 ............................. GAGACGATGACCGCCCTTCCCGGCGTCCTCGA 24381 29 100.0 32 ............................. TCTTCGCCGAGAGCCCCCAGGACACGCCCTTC 24320 29 100.0 32 ............................. CGGATCGCGGAGGGTCGCTCCTACGCGGACGC 24259 29 100.0 32 ............................. GAAACCGGGTTGGCGTGGATGCCGTTCATCGC 24198 29 100.0 32 ............................. CGGCCGTCCGAGGACGGGACGAAGTGGCTCTG 24137 29 96.6 32 ............................T GAAGATCAAGCGCGAGGTCGAGACGCGAATCA 24076 29 100.0 32 ............................. CACAGCGAGTCACGCCCTCAGCCTCCTGTCCA 24015 29 100.0 32 ............................. CGGTGCGCTGGACGGGCAGGTCGCCGGGGCAG 23954 29 100.0 32 ............................. ACTCCGAGAGACCCTGCTCCTGAATCTGCCCA 23893 29 100.0 32 ............................. GGCGTTACGTTCTTCGCTGACCTGCGGTGTCG 23832 29 100.0 32 ............................. CCCGGGCGGCTGTCCCCCGACCTCATCTGGGG 23771 29 100.0 32 ............................. TGGTCAAGGATGCTGGCGCGGGTCGTCTCGCT 23710 29 100.0 32 ............................. CTTCGGGCCATGACCACCCACCTCGCTGCCCA 23649 29 100.0 32 ............................. CGTGGCTACCAGAATGGGCGACGAGGAAAGCA 23588 29 100.0 32 ............................. TGCGCACCGCCTGCATCGAGTCCAATGTTCTG 23527 29 100.0 32 ............................. GCGCTCACCCGCTCGGGGCGTGGCGGCCAGGT 23466 29 96.6 32 ............................T AATCCACTCGATGATTCGCTTTTTGCTGCGGC 23405 29 100.0 32 ............................. CGCCTGGCGGTCGCCCACCATTACGCCTACTC 23344 29 100.0 32 ............................. CTGGTCGTCCGCGTCGACCCGGGCGGGCGCAA 23283 29 100.0 32 ............................. GATGACATGTCGTCAATCTTCACTGAGACATA 23222 29 100.0 32 ............................. CGGTCTCGCCCGCGCGAGAGCCGTGGTCTCGC 23161 29 100.0 32 ............................. GCGAAGGCGCCCCACCCATCCCGAGTGGGGCG 23100 29 100.0 32 ............................. TCGCCGGCGACTTCCCGGAGGGCGTCCCCCAG 23039 29 100.0 32 ............................. GTCACCCACTCCAGCGGAGACGAGGTCACGTA 22978 29 100.0 32 ............................. ATCATCGCCAAGGACAAGGCCAGCAAAGTCGT 22917 29 93.1 32 ............T........A....... TTCTTGTGGCTGGGGTGCCACCAGATCAGGAG 22856 29 100.0 32 ............................. GCGCGGCGCGGAATGTCTACCGCAGGGACGTC 22795 29 75.9 0 .........T.G.....CA......G.TG | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.7 32 CTGCTCCCCGCACACGCGGGGGTGTTCCC # Left flank : CCGCCCCGCGACTGCCCCGCTCCACCTCCTACGCCGCCGCCTCCACCACGCGGTCGCCGGTGGTCGCGGACTGCTGACGTCACCGCCGGGCAACGACCTCCGGGCGTTGCGCGACCACGCCCTGCCGACCGCCGCCGAGTTGCTGGAGAACCTCCACCGGGCCGCCGCCGATCGCTCCCGCGACACCTTCGGACGGCTGCGGGCCACCGACCCCGAACGGTTCGCCCGCGCATGGCTGGCCGTCGCCCTGTACACGGAGGAGCTGGACCGGGCACTGTGCGCAGAAGCCTGGACGGGTGCGGGGGCCTGACGGGGCGCTCGCACTGCGGCCGGCGCACGCGACGGCACGACCCGGACCGCCGGAGCAGGCCCGAACACCCCAGCCGCGTCGTATCGTTGCCCCGAAGTCGACCGCGCGACCTGGAATGGGCGAAATGCCGGAGTTTGGTAAAGTAAGTAAAATCCAGTTACTCGCCAGTTAACGCCCCAGGTCACGCACT # Right flank : GTTTCGGGATCAGCGGTGGACAGGGCGACCCGGTGGTTACCGCACGCGCGTGGCCGACAACTCAGCCGCCGTGAGGGCTCCACTCGCCCAGACCCTCGTAGATGTGCGCCTCGAGGCATTGCGGAGCGTCGAGGCCCACGGCTTCGCCCCGGTACACGGCGATGAGTGAGTCCTTGCCGCGCCACCAGGAATCGGTCGCACCCTCCACTTCGGGTACTGGATCGAATGCACGGAGATCCAACGTGTCGACGTCCTCACGCGTGACTCTTGTGACGGTCGCGGCCAAGCGGCGGGCATGCGCGGCGAGCGCCAGGGATTCCACCCAGCCGTCAGCGCTGGCATGCAGAGGCGTCCAACGGTGGGCGTTGATACCGAAGGCGCCGTCGGGCCCGATCTCGAAGCTGTAGGCCATGGACGCCCGGCAATCGCCTGCCGGGAACGACCAGCCGCCCCCGGGTGTCTCCTCGGGGCAGTCGGCGTCCAGAATGCGCGGCCCGCCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11342-11675 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000041.1 Streptomyces sp. ventii NODE_41_length_27615_cov_82.529061, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11342 29 100.0 32 ............................. TCCCAGGGCGAGCGCGTCTTCCGCGACCCACA 11403 29 100.0 32 ............................. CAGCAGGAGGAGGCGATTGCCAGGAGCCGCGC 11464 29 100.0 32 ............................. GTGGGTGATGTCGTCGCCGCACTCCTCGCTGA 11525 29 100.0 32 ............................. CACAACGGCCGGGGAGACAGCCTGCGCATGGG 11586 29 96.6 32 .............A............... TTGATCTGCCCCGGATCGTGATCCCCCGCGGC 11647 29 93.1 0 .....................T...C... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTGTTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : CGTGGTCATCATCGGAGGCCGAGCACAGCGAGTTCTCGACGCACGGCGGACCTACACCGGCGTACAACTCGGCGGCCGCGCCTGGCGCGTGGGAGTACCGCACGGCACTCCGATGACGGTCGTCCGCGCCATAACGCTCTCGCCGCCGGTCACCCCGGAGCAGCCTCGCCGGCCCTGGTGGCGGCGCCTCCGCCGCTGACCCCACCCGCACCCGAGTCGCGCCTGCAGCTCCTCCACCCCGCCCGCCGGCTGCCCAACCAGGGCGGCCACATTCCCGCGCCGGCCGAGGTGACCACCACCCGGCTCCCCCGCTGCCCCTCGGCCGGCGCGGCACCACTGGAACGCAGCTCCGCCCATCGCAACGACTGCCCGCTCCATCCCAGGCCCTCTTCCGCAGGCTCGGGCGGACTGTCCGTCAGCTCTGGCAGGATGCCGGTATGACTCACTCGACCGATGGCAAAGGATTCGCAAAGCCCACTTAACGTCCCAGGTCGCGAAGG # Right flank : GTGGCTTGCTAGTGCCGCGTCAGGCAAGGTTCGCCCTGTGGTGATGCGACGCGCCGTCTCGGTACTGCGCCGGGCGGCGCGTGTCCCGCCACGCTGTCCGGGTGGCGGAACGAGTACGTGTACGCGATAGACGATGACGAGGGCAAACGGCTGCTGCGATCACCCTCCGCGCTGACGCCTTCGATGTGTTCGTGATCGAGGCCCAGGCGGGCCGATTCGCCGGCTGAGACGAGAGGACCCCGGCCGGGCGGCCTCGCCGCGCTTGGGGGCTGTCGGTCGCGACCTACTCCCACACCTGCTCGGCGACCCGGCGGAAGTTGCCGCCGAGGATTCCGGTGACCGCCTCGTCCGGGTACCCGCGGGCCAACAGGGCGTCCTCCAGGGTCAGCAACTCCTCGGGCGGCATGAACGCGATGGGCCCCCAGCGCGTGTAGCACTCGGGGAACAGCTCGGGCGTCTCGGTGAGCAGCGCGTTGAAGTCGTCGTGGTCGAAGGGGTAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11586-12413 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000033.1 Streptomyces sp. ventii NODE_33_length_34255_cov_85.785463, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 11586 29 100.0 32 ............................. CTCAACCCGGCGGACGCCGCGCGCCTCGGTGC 11647 29 100.0 32 ............................. GAGCGCCTGGCCGAGTCGGAGACATACGTGGA 11708 29 100.0 33 ............................. AACAGCGACAACGCCAGGGCCTGGTACGGACAC 11770 29 100.0 32 ............................. CCCCACTGGGCCGTGCCCACCGCGCCGCCCTC 11831 29 100.0 32 ............................. ACCGCCGCAGCGGCAGCGGTCGGGTTTCCCGT 11892 29 100.0 39 ............................. GCGTGCGGCGTGCGGCGACGGGACGCTGGCGTCCATCGC 11960 28 96.6 32 .....................-....... GAGGCAGCGTGCCCCGACTCCGAGTGCTGCCG 12020 29 86.2 31 .....................TG.TC... CCATTCCGGGGCCCACCAGTGGGACGGTCGC 12080 29 96.6 32 ..A.......................... TACCGGGCCCGCGTGCTGCGTGTCCCCAGCAA 12141 29 100.0 32 ............................. GCAGCCCGGGAGGACTACGAGGACGAGCCGCA 12202 29 100.0 32 ............................. TTGGCCTTCACCCGGGCGTACCGGTTGGCGTT 12263 29 89.7 32 ..TC........................T GCCGGTGGGGGGTCGCGAGTCCGCGACCCCCA 12324 29 93.1 32 ..TC......................... CTGGGGTACCAGTTCGCCGGGTCGATCCGTCG 12385 29 93.1 0 ..TC......................... | ========== ====== ====== ====== ============================= ======================================= ================== 14 29 96.8 33 GTGTTCCCCGCGCAGGCGGGGGTGGTCCG # Left flank : TACCTGGCGCTCTACTGGGCGCAGGAGTTGGCGAAGCAGACCGAGGACGCCGCCCTGGCGACCGCCTTCGGCCCGCTCGCCGAGACCCTGTCGCAGCAGGAGGAGACCATCGTGGCCGAACTGGCCGCGGTGCAGGGCAACGCCGCGGACATCGGCGGCTACTACCAGCCCGACTTCGACAAGGCCACCGCCGTGATGCGCCCGTCGAAGACCTTCAACGACGCGCTGGCCACCCTCGGCTGACGCGGGTGGGGTGAGGCGGGGCCGGGGGTTGCTCTCCGGCCCCGCCGCCCCGCTCCCCGCACCACCGCCGACGGCGGGGGAGGCACCCCGACAGGGTCCGCCTCCCCCGCCGTCGGCGCGTGCGGGCGGGGGTGCGGGCGGGGCGCTGCCGAAGGCAGCGGACGCGGGCGCGTCGACTCTGACAAGATGCCGCCATGACCTCCGCGACCGCAGGCAAAGGATTTGCAAAGCCCCTCTAACACCCCAGGTCGCGAAGG # Right flank : GCACCTCCGGTCGGGACGGCTTCCGGTGCGCCGAACGCTCCCCGCCTGGCAGTCGCTGACTCATGAGTCGCGGCATACGTTTCCGCGCAGGGCTTGGCGACGCGCAGTACCAAGGCTGTCGGCGCGATACCACGGGTTGACCGTTCGCCGAAGTGGACAGGCTGTCCGTGTTGAACGGGGGCCGATTACGCACACGAAAGATCGGCAAGGAGGTCGCTTTGCCAGTCCCATACCGTGGTCTGATCCTCGACTTCGGCGGCGTGCTCACGACGCGAATGCGATTGAACGGGCGGGCGTTCGAGCGAGCAGAGGGGTTGACCCCGGGCGCGTATTCTGCGGCGCTTACTGAACATCCCGACGGCGTTGCGGTCTACGCCGCGCTGGAGGTCGGTGAGGCAACGCAGGAAGACTGGAACCGAGTCATCGGCGGCATCCTCGGCATCGACTCGACCGACCTGATGCGGCGCGCTCTGGCCAATCTGCACCCGGAGCCTCAGATT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16824-18743 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000033.1 Streptomyces sp. ventii NODE_33_length_34255_cov_85.785463, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 16824 29 100.0 32 ............................. GACCCGCGATGAACTCGATCACGACACAGGCC 16885 29 100.0 32 ............................. CTGCGTGCCGGTGAGGAGCGCAGCAGTCATGT 16946 29 100.0 32 ............................. GCCGTCAAGGTCGACAACGGCTGGCGGCTCTC 17007 29 100.0 32 ............................. CCGGTGCAGGACAACGTGGGCGCGATCCTGCT 17068 29 100.0 32 ............................. CATCAGTGAGAACGACCAACCTTCACTGAGAC 17129 29 100.0 32 ............................. AGCCGGGTGAACCGGTCGCGGACGTCGTCGGG 17190 29 100.0 32 ............................. CAGTACCAGAGCGCGTCGGAGTTCCGGGGGTG 17251 29 100.0 32 ............................. TCCGCGGCCACCGCCACTGGAACTCGGACCAC 17312 29 100.0 32 ............................. ACCGAGCTCGGTCGTCTCGATCTCCCGCACCA 17373 29 100.0 32 ............................. ACCGCGCAGCCTACGAGGCGACCGGTGTCTCG 17434 29 100.0 32 ............................. CTGGTGTTGCACCGCCGGCGGACCTTTACGTC 17495 29 96.6 32 .C........................... ACAGTGTCCAGCCTGCTGCGCTGGCTCACCTA 17556 29 100.0 32 ............................. GCACAAATGCAAATGGCCCCGCTCCCTTGTCT 17617 29 100.0 32 ............................. GCAGTGACCAAAGCATCCGGGTCCAACCCGCG 17678 29 100.0 32 ............................. GCCCGCATCGCGATCCAGGGCGTGTCCGGCTC 17739 29 100.0 32 ............................. ACCACCACCGGTCACCGGGTCTACCTCCACAT 17800 29 100.0 32 ............................. GCGTCGACCTGCCGTCCCTCGGTGCCGCCCGT 17861 29 100.0 32 ............................. CCGATCAGGGCGAGGGCGAGGCCGCCGATGAC 17922 29 100.0 32 ............................. CCCGCCGACTTCCCCCGCCTCGACGAGCAGGC 17983 29 100.0 32 ............................. TGCGGTCACCTCACGGTCGACGCCCGCAGCGA 18044 29 93.1 32 ...............A............C GTGCAGGAGTCACTCCGGGCGCTGGCCGAGCT 18105 29 100.0 32 ............................. ATGATCCGAGTCCGGCGCGCGGTCGACGTCCT 18166 29 100.0 32 ............................. GCGATCTCGCCCCGCTCATTCATCGTCAGATC 18227 29 100.0 32 ............................. CTCCGGGGCATGAAGGCGGCGCGGTTCCGGTC 18288 29 100.0 32 ............................. GCGCCGCGGCGTCCCACGCAGCAGGGACAGGC 18349 29 100.0 32 ............................. TCGCGCCCCACGGGAGAACCAGCCATCGCAGC 18410 29 100.0 32 ............................. TGCGGTTCGCCTGCCTGTTCCGGTGACCAGTC 18471 29 100.0 32 ............................. CGGCGTGCAGCACGGCCAGGGGGTGAGCGATG 18532 29 75.9 153 .............A........CAACAA. TGAGCTTCCCCGCCGCGGGGGCCTCAGCCCGCCCCCGCCCCCACCGGCGGCGGCCGGTCAGAGGAGGGCGCCGCCGGAGACCTCGATGCGTTGGGCGGTGACCCAGCGCAGGCCGCCGGTGGCCAGGGTGGCGATGGCGTCGCCGATTTCCTC 18714 29 72.4 0 .G....G.......GC..AA..C....T. | A [18724] ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 30 29 97.9 36 GTGTTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : CGCCTCCCAGGAGACCGAACTTCCCCCAAGCCGCCCCCACACCACGAAGGGGTCCCTCGATCTGGGCGCCGCCACGCGAGTCCTACTCTCCGATTCCGCGCCTCCCGCCAGCCACCGACGATCCGCCGTCCCCACGAGCGGCGGACTCAGCCCAGACTGGCCTGACTTGGGTGCCACAGTCCTCCACAGCGGGCTCGACGGCAACTCCGCCGATGCCATGGATCACGACGACAGCGACGACCTCACGAAGTGACCGCCGGAAAGCCCCCGTGTACGCCACCGGGCCCCCCGGGCCACGCGTGCTTCCTGACCTGCTCCCTGGAGCGCAGCACTGATCTGAACTCAACACGCGAGGCGCCCCGTTTGCGGCGAACGGCGCGCACCGCCCGCGGAGTGAAGCGCCGCGGACTGCCCAGCGCCTCTGGCAAGATGCCGGTATGACCCGATCGACCGATGGCAAAGGATTTGCAAAGCCCTCCTAACGCCCTAGGTCGCGAAGG # Right flank : GTCCGGCGAGCACTTGGCGCATCTCGGCGTTGTCCCGCATCGCTCCCCCGTTGAAGTCGGTGGCGGTCGGCCCGGGGGCGATGGAGTTGACGCGGATTCCGCGCGCGCCGAGTTCGCCGGCGAGGGTGCGGCTGAGGGCTTCGACGGCAGCCTTCGAGGCGGAGTAGACCGAGGTTGCGGGGCTGGTGTGGCGGGTCAGCGACGTCGAGACGTTGATGACGCTGCCGCCCTGGGCCAGCAGGGGCGCGACCGCCTGGGTGAGGAAGAACGTCCCCCGGACGTTGGTGCCCATCACGGCGTCGAAGTCCTCGACCGTGACCGCCTCCAGCGGCCCGAAGACCCCCACTCCCGCGTTGTTGACCAGGACGTCGAGCCGCGAGGCGCCCCAGCGCTCCAGCTGCTCACTCAACTCGGAGGTGAAGGACGGGAAGGAGTCGACGTCACGGATGTCGAGCCGGAGCGCAGCAGCCGTTCCGCCCGCCGCCTGCACCTGCTTCACC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.37, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4954-5775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000015.1 Streptomyces sp. ventii NODE_15_length_46592_cov_50.428870, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4954 29 100.0 32 ............................. CGCGGCCGAGCTGGAGAAGATGTTCAACGCCC 5015 29 100.0 32 ............................. AACCAGCTGTTCGCCAGCGCGCGACGCCTCGG 5076 29 100.0 32 ............................. CAGGCGACAACCCGCGGCCGGTCGGCCGGTCG 5137 29 100.0 32 ............................. TCTGCTGGTCCCGGGCGCGGCCGATGATCTCC 5198 29 100.0 32 ............................. TGAATCGCACCGAAATGACACCGACTGACACC 5259 29 100.0 32 ............................. GCCGTCCGCGAGTACGCGGCCACCCTGGTCGC 5320 29 100.0 32 ............................. GAATTCGCGGCGGCCGAACTGCTGAATTCTCA 5381 29 96.6 32 ..........T.................. GAGCGGCCGTTGACCATCACAACGGTGGCGGT 5442 29 100.0 32 ............................. CGCGTCGCCCCCGGTGAGTTGCTTCATGAGCG 5503 29 100.0 32 ............................. TGACGGAACAGGGACTCGACGCGGACGACCCG 5564 29 100.0 32 ............................. CGGGCCATCAACGCGATGAACGACCACGCCCG 5625 29 100.0 32 ............................. CGCAGGAGGGGGTCAGCGAAGGGGGCTTCGGC 5686 29 100.0 32 ............................. GACAAGATCAGGGGTGGGATCGACTGGGTCGT 5747 29 86.2 0 ............T......A....C...G | ========== ====== ====== ====== ============================= ================================ ================== 14 29 98.8 32 CTCCTCCCCGCGCATGCGGGGGTGTTCCC # Left flank : CGCCGCTGTCACGCGGCCGGGTGCTGGTCTGCGGCGACGCGGCGGGGCTACTGGAGCCGTGGACCCGCGAGGGCATCTCCTTCGCGCTGCGCTCGGGACGGCTGGCGGGGGAGTGGGCGGTGCGCATCGCCGAGGCCGGGGACGCGGTCGACGCCCGCCGGCAGGCGCTCAACTACACCTTTGCCGTGAAGTCGGGGCTCGGTGCCGAGATGGGCGTCGGCCGGCGCCTGCTCGACATGTTCACCCGGCGGCCCCGCCTGGTGCACTCGGCGCTCATCGGCTTCCGCCCCGCGTGGACGGCGTTCACTCAGATCACCCGGGGCTCCCACACCCTCGCCGGCATCGTCCGCACCTCCCCGGTGGCCCGCAAGGTCCTCGAACTGCGGGACCGCCCGTGAGCGGGAGGGGCGGGGGCGGGGTGAGGGATGGGCGAAATGCCGGATTTTGGTAAAGTGAGTAAAATCCGGGCTCGGCACAGATAACGCCGCAGGTCGCGCACT # Right flank : GTGTCGGGCAGGCGGGGCGTTCCCGGTATGGCAGTGCCGACGGTGTGGCGTTGCAGTTTCGCTGAGGGTGTCGGGCAAGGGGGAGGTTATGGGCAGCCGCGCGCGGTGCTTCGGGTCAGTCGTCTCCGACGGCGATGTTCAGTTCGCTCACCAGGGCCTGCGCGAGGTCGTGCTGCTGGCCCACGTCGATGCGGACCTTGGCAAGGTGGGGGAGGCCCCGGAGGCTGGTGAGGTCATTCCCGCGCAGATCGGCGCCGCGGTAGCGGCCAGGGCCGAACTCGGTGAGGCGCAATGTGCAGTCAGAGAAGACGACATTCGACAGGTCGCAGTCGGCGAAGGCGGCTTCGGTGAGAATGCAGCCGACGAACACAACAGAGCCGGTGGCGCGGACATTGGTGAAGGTTGCGTAGTCGAGTCTGCAGTTCTCGAACAGCACATTGTCCAGCACCAGGCTGTCAAACGTGGCGCCGAGGAGCTTGGTATCTCGGATGGTGACGCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCATGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2369-5155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000088.1 Streptomyces sp. ventii NODE_88_length_19762_cov_80.832595, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================================================================== ================== 2369 29 100.0 32 ............................. TGCCGACCCGGTCCGGTTGATGCGCCTGTTCG 2430 29 100.0 32 ............................. GAGGAGCGCTTCGGCGGTGCCTGCGTCCTCTA 2491 29 100.0 32 ............................. AGCGGCAGCTGGCCGCGGGTCAGGCGGTAGAA 2552 29 100.0 33 ............................. TGGGCGCTCAGCGAGCGAGCCAGCTCCTACGGC 2614 29 100.0 32 ............................. GCGTTGTAAATCATTCCCGGCACGCCGCGGAG 2675 29 100.0 32 ............................. GGGGCACGCAGGGGTAGAGAGAGCTGCGTGAG 2736 29 100.0 32 ............................. GGGTCAGGTCGAGGTCCCCGGGCTCGGCAAGG 2797 29 96.6 32 ............................T ATGATGCGGTTTCCGGCCTTGTACGATCCCGT 2858 29 100.0 32 ............................. AGGACGGAATTCGCCATGGCGATTCCACCGAC 2919 29 100.0 32 ............................. GCCGCGTGAGCGCCGCCCCGGCCCCCGAGCCG 2980 29 100.0 32 ............................. CGGCGCGCTGGATGGGCAGGTCGCCGGGGCAG 3041 29 100.0 39 ............................. TGACGGAGACTCAGGCCGCGAGCCTCCCGGATGGATCGA 3109 29 100.0 32 ............................. GGGCTACCGACTCCAGACCGAAGGGTACGCAA 3170 29 100.0 32 ............................. ACCTGGTAGGTCGCTCCGACGCGGCGGAGCGC 3231 29 100.0 32 ............................. GTCGCGCGCCCAATTTAGGATCTGCGTAATGC 3292 29 100.0 32 ............................. CTCGGATGACCTGGACCTGCGTTATGCAGGTC 3353 29 100.0 32 ............................. CCCGACGACACCGACCTCAGCTTCGGCTGACG 3414 29 100.0 32 ............................. TGCCGCCCAGTGAGGGAATCCGCCCCGTCCCA 3475 29 100.0 32 ............................. TCGTCGATCGCGTCGACCTTCACCACGATGCG 3536 29 100.0 32 ............................. TCGGGCGCCAGCCGGGGGCGGACCTGGACGCG 3597 29 100.0 32 ............................. GACGGCCGCATCGACGTCGTCACCAGCTCGGC 3658 29 100.0 32 ............................. ATCCGACCCCGGTCCGAAGAGGCGCTTACCGC 3719 29 100.0 32 ............................. CAGCCGGGCTGGCCCGCGTGCCGCGCCTGCCG 3780 29 100.0 32 ............................. GGCACGCTCGCGAGGAGGACCCCGGCGAGGGT 3841 29 100.0 32 ............................. TCCCGCGCCGCGGGCGACCCGGCGATGCTGGG 3902 29 100.0 32 ............................. GGGGTAAGCCCGGCGGCGACAGCGCGCACGTG 3963 29 100.0 33 ............................. GACCGTGAGATGGCGCTCTGGGGTGGGTGGTGA 4025 29 100.0 32 ............................. AAGGCGCCCACGGCGGATGCAGCGACCGCCAG 4086 29 100.0 32 ............................. CAGTCCATCGCTTGATGGCTACTGGGCGCCGC 4147 29 100.0 32 ............................. CCGCGGCGCAGCGAGTGGCCGGACCACTGCCC 4208 29 96.6 33 ............................T GCCGGGGGCGGCTGTGTTGTCAGGTGGCGGTCG 4270 29 100.0 32 ............................. CGACTCGCGATCGCAAGCTTCCAGGCGGGGAT 4331 29 100.0 32 ............................. GTCAACCCGCGCACGCCCCGCTCCTGGGAGAG 4392 29 100.0 32 ............................. CGCCGGTACGTCCAGCAGACCGAGGCCGACCG 4453 29 100.0 32 ............................. GAAGCTGTTCGTCACGGACGCCAACTACCAGG 4514 29 100.0 32 ............................. AACGACGTACGCGCCGACGGCGGCGTCCGCGG 4575 29 100.0 32 ............................. AGTGAGCCCTGCCCGTCGCCGCGTTCGCCCTG 4636 29 100.0 32 ............................. ACCGACCCCGGCCAGGCCGAGGTCGAACACCT 4697 29 100.0 32 ............................. GGTGCAGACCTCGGCGTCGCCGCCGGCGGACC 4758 29 100.0 33 ............................. GAGTGGATGTGGAACGTCACCCCGCTCGCCAGC 4820 29 100.0 32 ............................. GTCAGCATGGCCGGCTCCTCCCTCCTCTCTTC 4881 29 100.0 32 ............................. ACCACCGGGTACTACTCGTTCTGGATCCGGCT 4942 29 100.0 32 ............................. CGCTGGAGGTCGACCGGCTTGTGGCCGATGAC 5003 29 96.6 95 ............................T TTGAGCACGGCTCTCCTAAAGCCGGTGTCGCACTGCTCGCCACGCGTACGCGAACCGTTCCAGCGACGGACTCATAATCCGTCGGCCGTGGGTTC 5127 28 93.1 0 .....G...........-........... | T [5154] ========== ====== ====== ====== ============================= =============================================================================================== ================== 45 29 99.6 34 CTGCTCCCCACGCACGTGGGGGTGTTCCC # Left flank : TGTGCCTCATGAAGTTCGCGGATGCACCGGACCTGGCATACGTCGAGGGGCTGCACTCCGGAACCGTGATGGATGCCGACTGCCTGGACGAGGTCCAACTCTGCCGCGACGCGTACGATTCAGCGAGGGCGGCAGCCCTCCACCCGGATGCATCCCTGCGGCTTCTCGAAACCGTCATGGAGGAGTACAGATCCCATGTCCGCACCCTTCAGTCTCAGCAGCACTCGTTGGCGGAAGTCGAGCTACAGCGGCGGGGATAACGGCTCCTGCGTCGAGGTGGCGGACGGCATCCCCACCCACCTCCCGGTCCGGGACTCCAAGAACCCGACCGGCGCGGCACTCGCCATCCCCAACGCCACCTGGACGGCCTTCATAGCCGGCCTGACCACCAGCGCCCTGGGCCCCGGCGCGCGACGGGACACACGGTGACCGAAATGCCGGAGTTTGGCAAAGTAAGTAAAATCCACCTCCCCGCCACCTAAACCCGCAGGTCGCGCACT # Right flank : CTCGATCTCCGGAGCCGGGCTGCTGCCTCGGTGCTCAGGACGTTCGGGGAGGCCGAGCACGCAGTCTCCAGCGCCGCTTGCCCGCCGGCCGGGCGACAACTATCCAGCGACCTGCTGTTTACAAGACAACTGCTCAGGAGTTAGGGAAGCCCTTACGTGGCTGCGGCAGGATCTCAGCGGATGTGTGGCAGGTCGGCCCACGCCGTCCGCACCGATGCGGTGGCCCGAGTCGTAGACCGCCATTGCCGCCGCAGGCAGAAGAGAAATGCCGACCGGGGTGGGTCCAGGACCCACCCTTCCCGCAGGGCGAGAGGGGGAAGCGCCCCCGGTCGGCGACCACCCTTTCAACGAAAGGACGATCAGGGTACACCCGACAACACCGCTGTATGCGACCGCAGTTGAGCCGCAGCACCGCACCCCGTGCCCCGGCGGGCAGCCGGAGCACGGGGCAGTAGGGCGGCGGGATGCGGCCGGGATCAGTTGCCGAAGCGGCGGCGTTT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCACGCACGTGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCACGTGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 15756-17997 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000088.1 Streptomyces sp. ventii NODE_88_length_19762_cov_80.832595, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================= ================== 15756 29 100.0 32 ............................. ACGGACCCATGGGGACCCAATTCTGACCTGCA 15817 29 100.0 32 ............................. GAGGCCGGCCAGCCGGATGACCTCGTCGCCAT 15878 29 100.0 32 ............................. GCCTGATCAAGGAGACCACCAGCTCATGAGCC 15939 29 100.0 32 ............................. GTCACCATGGCGCTACCGGGCATGGTGACGGT 16000 29 100.0 32 ............................. GTGTGGGAAGGGAGCGTTCGGAGCGGGAAAAC 16061 29 100.0 32 ............................. AGCGCGCCTGTTCGGCCACCGCGCCGTCGTGC 16122 29 100.0 31 ............................. TTCGGCAAGAAGGGGAGGCGCTCGGATTCCT 16182 29 100.0 32 ............................. TCGCGGCAGTAGGGGTGGTCCGAGTTCCAGTG 16243 29 100.0 32 ............................. GCCATGGCGTACAGCCGCGGCGGGGCCGTGAA 16304 29 100.0 33 ............................. CGACTGGAAGTTGTGGCAGGAGTTCCACGACTG 16366 29 96.6 32 ............................T GAGGTCGAAGCCTTCGTCGGCGTCCGCGACAA 16427 29 100.0 45 ............................. GTGCCCCGCTTCCGCGAGCCATTGCAGCGCGCGGCGCGCGGTTTC 16501 29 100.0 32 ............................. TACACGCACCTGCGGGAGTGCCAGGACACGCG 16562 29 100.0 32 ............................. GGGCATGTCAGTGTGCAGCACCGCGCCCGATC 16623 29 100.0 32 ............................. GCCCCCGGGTAGGTGGCCCGGGGGGCTACATC 16684 29 100.0 32 ............................. TCGCCCGCGGCCGGGCCCTGGACCCGGCCGGG 16745 29 100.0 32 ............................. AGGGGGGCTTCGGGGCCCTCCTCGGCAGCCGT 16806 29 100.0 32 ............................. CTGGTGTCGGTGCGGCCGGACGGCGGGCTGTA 16867 29 100.0 33 ............................. AGACCACCACCGAGTACCTCTTCTGTGGCGCCG 16929 29 100.0 32 ............................. ATCGGCTGCGCCGCCGCCCGCACCCTCGCTGC 16990 29 100.0 32 ............................. GCAGCCGCCCCCGCCCCGGCCGCCTGACCCCG 17051 29 100.0 32 ............................. ACCAACGTCCTCCTCCTGCACCGTCAACGGTC 17112 29 100.0 32 ............................. GGCGAGCGGCACCATCTGGGCGGCGAGGGAGG 17173 29 100.0 32 ............................. GTCGCGGTCATCCGGACACGCGGACTCGACGT 17234 29 100.0 32 ............................. ACGAATGTGATGCTGCTGCACCGGCAGCGGTC 17295 29 100.0 32 ............................. GCACACGAAGAACGACACGATCACGGTCCCGG 17356 29 100.0 32 ............................. TCGAACGCGGCCCAGGTCGCCTTCACCGGGTC 17417 29 100.0 32 ............................. CCGCAGGACTCCTCCACGCCGATCGTTACGGC 17478 29 100.0 33 ............................. TCGCCGAGCTCGGCGTACTCGGCGGACAATCGG 17540 29 96.6 32 .........................C... GCCGCCGGGAGGCAGAGGAAGCCCGCGCAGCC 17601 29 100.0 32 ............................. GAGCTGCCCGCACCGCGGACTTACGAGGAGCT 17662 29 100.0 32 ............................. GCCGGACGGACGAGGCGGTCGCCGCTGCGCTG 17723 29 100.0 33 ............................. GCAGCGAGCCGGAGTCGAAGCCGTCGTCGTCGA 17785 29 100.0 32 ............................. CCGGTTCACCGCGGTGAGGGCGAGGGCCTGGG 17846 29 100.0 32 ............................. GACAGCGGCCCCCACCGGATGGTGGGGGCCGC 17907 29 100.0 33 ............................. TGCTCAAGGATGCTCGCGCGGGTCTGCTCGCTG 17969 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================= ================== 37 29 99.8 32 CTGCTCCCCGCGCATGCGGGGGTGTTCCC # Left flank : CGCTGTCGGCCATGTGCCGCCACAGGGGCAACCACGCGCCGTTCAGCGTGCCCGCCTGATCCGTCTTGCCCCAGGCGGCGCGTGCCGCGTCCGACAGTGTCCCCAAAGCCGTCCAGCGACCTTCCCCGCCGCCGAACGCATCCCCGAATGCAGACATGACTCCCCCGAAGAAATGGTGCCGATGTGGGGGTGCTGCACAGTGTGCGGCATGAGACGGAGCCACCGGAGAAATTCTCGGCACTTCGGAGAAAGTCGAGCGCTGCTGCATCACCGCGTGATATCAGCCCTCGCGCCGGGCGGGCGGGCCACCACAGGCGAGCCCGAACCTGAAACCTGCGCGTCATCCACTACCGTTGCCACGTCGACCACACGGACGACAACGGATGACAACGGATGACCGTGAACGGAAATCGAAAGATTGGCCTTGGTTCGGAATGCCGGAGTTTGGCAAAGTAAGTAAAATCCACTCCCTCGGCGGATGAACCACCAGGTCGCGCACT # Right flank : CGTGGTGTGCCGCAGGCGGAGGTGGGCCGAGCGCCTCTTCTGGCTGGCAGGCGCGATTGCTCACCATGGCCGAGACATGGGACCGGGCCGTGCTGCGATGCGTCCGGCTCCCGTGCCTGCCGGGGTCAGATGCGGAGGGCGCGGGCGGTGTTGGCGGCGATGTGGGTGGCGAGGGTGGTCTCGTCGGTGGCGCGGACCTCGGCCATGACGCGGAGCGTGTAGGGGATGAGGTAGGGCGCGTTGGGGCGTCCGCGGTACGGCGCCGGGGTGAGGAACGGGGCGTCGGTCTCGACCAGCAGCAGGTGGTCGGGGACGACGGCGAGGGCATCGCGCAGCGGCTGCGCGCTCTTGAAGGTGACGTTCCCCGCGAAGGACATGTAGTGGCCGGCTTCGGCGCAGCGGCGGGCGAAGTCGGCGTCGCCGGAGAAGCAGTGGAAGACGGTGCGTTCGGGGGCACCCTCGTCCTCCAGGACCCGCAGGACGTCCTCGTGGGCGTCGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCATGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7656-8601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJB010000016.1 Streptomyces sp. ventii NODE_16_length_45152_cov_76.778086, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 7656 29 100.0 32 ............................. ATGCTGGCGGTCTTCTTGGGCGGGACCCTCAG 7717 29 100.0 32 ............................. GCCTTGCCGGGCTCCAGGCGATTTTCGAGCAG 7778 29 100.0 32 ............................. GTAGCCGTGTGGATCTTGCAAGGAGGCAGAGG 7839 29 100.0 32 ............................. ATGGACAAGGCGAAGCTCTACGTCGGCACTGG 7900 29 100.0 32 ............................. GCCGCAAGGAAGCCATCGCACAGGGCACCTGG 7961 29 100.0 32 ............................. CCGGAGGCCCTCGGCTGCAAGACCTGCAGGCA 8022 29 100.0 32 ............................. ACCGGCGCGATCGTCTACAACCTCGCGCAGCA 8083 29 100.0 32 ............................. TTGGCGGACGACGAGCCACCGCCACCCATGAG 8144 29 100.0 32 ............................. GTGTGGGACCGCCTGGAGCACGCCCTCACCAC 8205 29 100.0 32 ............................. TCCTTGATGGCGTCCGCGACGACGTCCGCGTC 8266 29 100.0 33 ............................. ATCCGCGTGCAGTAAGAGAGGAGCAGCATCATG 8328 29 100.0 32 ............................. CACACGGGCGGCCCGCTCTGCATCGAGATCGA 8389 29 100.0 32 ............................. CACACGGGCGGCCCGCTCTGCATCGAGATCGA 8450 29 100.0 32 ............................. CAGTGACCGACCTTGCTGTGCGCGACGAAATG 8511 29 100.0 33 ............................. GGCTTCGCCGTCGGGATGAACCCGAACCAGGCG 8573 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 16 29 100.0 32 CTCCTCCCCGCGCATGCGGGGGTGTTCCC # Left flank : CTTGCCCCAGACGACGTAGTCGCCCTGCTCGGCCAGGACCACGCTGCGCCCGGGCAGCTCCACCCGGAACCGGCCGCTGATCAGTACCAGCAGCGCCGTCCGCTCTTCGCCACGCACCCACTCGGCGCGCTCGTCGCCGGGCGGGTGGACGCCCCACTTGATCTCCAGGGCGTCACTGTGACGGGGGTCGCCGGGCTCCTTGAAGTGGCCCAACAGCCAGCCCCGGTCCAACGGCGCGTCCTTGCCGGCGTTCCCCACGTACACGGTGTCGTTCATACGACCGGATGCTAGACGGCAGCCGACGCGGCACGCGCACCGTGCCACCGGCGGTCCCGGCGAACGGCCGCGTGTCGGCGACCCGGAACCGGTACGGTCCTGCTGTGACCAGAACCCCGCGCGACACCCGAGACGGCGAGATGGTGTGTATGTGTCAAATGCCGGAATTTGGCAAAGTAAGTAAAATCCGGCTTGCCGCCACCTAACGCCCCAGGTCGCGCACT # Right flank : CGTGCGGGTCTGACCCCGCTCCACCAGGGCGAGCTCCTCCCCGCGCACGGGAAACGAACCCACCGCTCTGGAAAATTGTGTGGCCCGGTGGAAGCGCGAGGATCCGAACCAACGAGGCAGCTTGCGGCAGGGCTCAAACAAGATGGTGATCACCATGGATGCCTACTGCTTTCTGATACCTCGGTCCTCCAGAAGGACGGCTACCTCCGGCACGTCCTCGAAGGGGCGCAGGTGATGCAGTATCACGCGAACCCTGTCGCTGGTTCGGTCTGACGCGATGCACTGTGAGATGTCGATGACGCGTCGTGCGACATCCGCTGCTTCCTCTGGTTCGTTGGCATCGGTGAGGGCAACTGCGAGCCAGGAGAGGTAGAGGGCAAGTTCGCGTGTGTGCGTCACGTCGTACCTGGCGAGCACGTCGCGCAACAGCGGAACCGCGCGCAGTGGCCTGCGGAGCTCCGTGTAGCAGCGTGCCTCCATGATCTTCAGCTCATCCGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCATGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //