Array 1 228968-226470 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFJQ01000004.1 Cloacibacillus sp. An23 An23_contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 228967 33 100.0 33 ................................. TTCGATGGCGTCAATGCTCCATCCTTTTGCGTT 228901 33 100.0 34 ................................. GATAAACAAACGGCTTATATACCCACATCCCCAG 228834 33 100.0 34 ................................. TTAGAGCCTCCGACAATGAGAACAACAACGTCTA 228767 33 100.0 34 ................................. ATCAGAGCGGGCCGGACTACTGGGGCACTGCGGC 228700 33 100.0 34 ................................. CGGTATCATATCAAATTCACGTGCGGAGAGTTGG 228633 33 100.0 33 ................................. TACAAGTGTTTACAGCGCCTCCATGTTGATTTT 228567 33 100.0 34 ................................. CGACGTAATCTCGCTCATATAGGCCGTTAGCCGC 228500 33 100.0 33 ................................. ACCGTCGAAGAGTTAAAAAGACAATATCGCCGC 228434 33 100.0 33 ................................. TGTCAGTTTTGCCATGACAATTACGATTTTCAA 228368 33 100.0 34 ................................. GACCGGGATGGCTTCGGGCAACTGATAACTAGGA 228301 33 100.0 33 ................................. TCGATAGTCAAACATGCTGTTCATTTCTTTTGC 228235 33 100.0 35 ................................. TGTACTGGCGCTTGAGCTCTTCGACGGTAAATACT 228167 33 100.0 32 ................................. AAACATCCGCATCACCCTACGATTTTTGATTG 228102 33 100.0 35 ................................. TGAATTCTGTAAACTTACGTTTCTGCTGCTGCATC 228034 33 100.0 34 ................................. TTCCAGAAGAGCCATACAGTGGACGGATACCTTA 227967 33 100.0 35 ................................. TCGTCTATCGTGTCCGAGGCGCAGAGGTCTATGTA 227899 33 100.0 32 ................................. CAAGATGGTAGCGGTCATAGCGTAAATTACAC 227834 33 100.0 34 ................................. CAAGATATAATCCACAAACGCCTGCACCTTCGCC 227767 33 100.0 35 ................................. CTCGAAGAAACAGCAGTCCTCCGCGAAGACGTCGC 227699 33 100.0 34 ................................. TCCTCCGGCAGCGAGCGGATGACGTCGAGAAGGG 227632 33 100.0 32 ................................. TAAAAATCGTGTCCAGATTGAATATACTGTTG 227567 33 100.0 33 ................................. AGATTCAACTTCTGACGCTCCACCTCGCGCGGC 227501 33 100.0 33 ................................. CATACAGGTATAGTGTACGACTTATCCCTAAAA 227435 33 100.0 33 ................................. CACATTTTGAAGAAATTACAGAGCTGAAAGAAT 227369 33 100.0 34 ................................. GATGTTGTCTTTCCAAATGCCGTATCGCTTGCCT 227302 33 100.0 35 ................................. AGCTCTATAACGTAAATCTGCCGTCCCCATGCCTA 227234 33 100.0 33 ................................. GGCCTTGAACCGTCAGTCGCGCTCAACTGCGCC 227168 33 100.0 34 ................................. TCTGGCGTGTCGTCGGGCACGTTTTCGTCTTTGC 227101 33 100.0 33 ................................. GGAATGCAGCTATGGAACCCCGAAAGCGCCAAA 227035 33 100.0 35 ................................. ACGGTGTCCCAGCCGGGGATGACCGTGACTATCGT 226967 33 100.0 33 ................................. AGTGCACCGCTCTCGGCCTCGGCTGCCTTGCGC 226901 33 100.0 33 ................................. GCTAGGTTGGTATATCGCAGACCATACCGTTGC 226835 33 100.0 34 ................................. CTCGGATTTCCGCCGCCCATTTTATCTGCTTCTC 226768 33 100.0 33 ................................. TTGATACCCCACTCCAAATCACGCTCGAAAATA 226702 33 100.0 33 ................................. TGGAAAGTGAACGCTTGTTATGCCCTAGGAGAA 226636 33 100.0 34 ................................. GGCTGTGCCATGTCTCACACTCCTTCATGCGCCC 226569 33 100.0 34 ................................. CGGCATTGTCGGCCTCCCATGAGCGAGAGAACTC 226502 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 38 33 100.0 34 GTCGCGTCCCCCGCGGGACGCGTGAGTTGAAAC # Left flank : AGACGACGGCGTAGTAGAGGCCGTCATCGCCCCGGCGTACCGCTGGGCCGTCGGCGTACAGTGGCATCCGGAATGCCTGGCCGACGACGACGCGGTGCAGGCAGAGATATTCCGCATGCTCGTAGACAAGGCGAGGAATTAGCGGACAGGTACATGCCGCCCGCCGCCGCACGCACGAAGCCGCTGCGGAAAGGCGCGGGTAAACGCTCCGTTGCGTGGAGAAACAGCCCCGCCGTCATACTCTAAACGCGGCGGCGCTGGCCCCAAATATCCGCCATTACCAAGCCCGTCCTTCCGAAGCGCGCGGCTGAAACGGCGGCGGCCAAACATATGCGCGAACCCTAAGCTCACATAAAAATCCCAAGGTTTTCGCGCTTCGCTCCAAATCGAGAATTCCCATGAATTTTACCTAGACGGCGCGCATCGGCAGAGCGCCATAAAGCGCCTTCGCGTAATAACGCTGAAAAAGTGTTATTATAACCGTGTCTAATCGCAATGCC # Right flank : CTCGGTACGGCTTTTGGCTCTGGGGACGGGACAAGTCGTGTCCATAGTGGGGCATGGGTGGGCAAACGCCTATCGGGCGCGTGGGAACGCGGTTCTTTCCTCCGCAGCGTCTTTTGCCGGCTGACGCCTTATGCGTATCTCTTCCGCAGCTCCTTCGCTCTCGCCAGGTTTCCGCCTTCTTCGGCGAACATTCTTGAGAAGCGTTCCTCGGCTGCCGTGTCGTGCGCGTTTCGCGCGTTCAGTATGAGCATCTCGCACAGGTCGAATTTTGCGAGCTTCGTCGGCGTGCGCTTCATCGTCTCCTCGAGCGCGGCGGCGTCCGCCGTCTTGCCTTCGAGCAGCGCTAGCCACGTCTCGTACAGTTTCGCGTCCGCGCCGAAGTTCTCCGCGAGCTTCGGGTTGCTGGTCTTCAGCGTATCGAGCAGGGCCTTGAAGGACTCGAGGGCCCGGCGCGCTTCTTTATGCTGCCTTCCCCACAGCAGGCAGCGGCATCTGTTTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCCCCGCGGGACGCGTGAGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCCTCGCGGACGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 234331-232913 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFJQ01000004.1 Cloacibacillus sp. An23 An23_contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 234330 32 100.0 34 ................................ AAGAGCCTGACGGGACAGCGGAACAGCGTGCTCG 234264 32 100.0 36 ................................ AGTGTGGTGAGGAGGTGAAGTTATGAGCGAAAAAGC 234196 32 100.0 34 ................................ GTTCTAAGGGGCTTATCGCTGAGCGGCGCAAGGA 234130 32 100.0 34 ................................ CGGCCGGCTTCGTGCGCTTCGCGGGTCAGGAGCC 234064 32 100.0 34 ................................ TGCCGTCAAGGCACAACTTTTTGACTTGTGACTG 233998 32 100.0 34 ................................ CAGGCGCTAAAAGGTACTGTGTCGTCGTCTCGCC 233932 32 100.0 34 ................................ CATAGCCGCGCGCCATGCCGCGCTCGCCTTTTTT 233866 32 100.0 34 ................................ ATCAAATGGGACTATAGACCTATTGCGAAACGCA 233800 32 100.0 35 ................................ CTCCTGTGGTATAATATCCGTGTCGGGCGAATTTT 233733 32 100.0 33 ................................ GCCATCCACTGCTAGATACGCGCCTGTACCTTC 233668 32 100.0 33 ................................ TGCTCTGTTCCGACTCGTGAAGGGCCGCTGCGC 233603 32 100.0 33 ................................ CGTGTCGTCTATAGATACTGCTAAAGCATCCGT 233538 32 100.0 34 ................................ TTGTCTCTCCGGCCATAAATACTAAAGAGCATCC 233472 32 100.0 33 ................................ CTGTTATGCTTGTTTATCGCGGCCTCGTGCGCG 233407 32 100.0 32 ................................ CCACGGCGCTTGAAGAGGTACGTGCCCCAGAG 233343 32 100.0 35 ................................ CATTAAGCGGCGGCCTCGCCATACGCCGCGGCCTA 233276 32 100.0 35 ................................ CCCTACTCACCGGCAGACCTCGAAAAACTCATCGA 233209 32 100.0 34 ................................ ATAAGCTACCTCAAGAACTACAGCGACGGCCTCA 233143 32 100.0 36 ................................ TGCAAACTGCTCTGTACGACCGGCGTGGGTGCCGGT 233075 32 100.0 33 ................................ GGGTACACGAATGACCCGTCAGCGCTTTTTTGC 233010 32 100.0 34 ................................ CGTGATGTGGTCAAGTATATGTATAACGATATAT 232944 32 93.8 0 ..................A.......C..... | ========== ====== ====== ====== ================================ ==================================== ================== 22 32 99.7 34 GTCGCGCTCCTCGCGAGCGCGTGAGTTGAAAC # Left flank : CCTCAGGAGGCCGACATAAAAATAATAAACCTTGCGCAGTCTGGCGACGCCGTCGTAACGCAGGACATCGGACTCGCCGCCGCGGTGCTCGGCAAAAAATGCGCCGCGCTCAATCCGTGCGGCTTCGAATACCGCGAGGATACGATAGCCGCCGCGCTCGAAGAACGCGAAATAAAGGCGAAGCACCGCCGCTCCGGCGGTCGCACCAAAGGCCCGCCGAAAAGGACGAAAGAAGACGACGGACGCTTCGCGGCGCGCCTCGAACAGATACTGCGCCGAACCATTAAAGATCACCTGGAGTAGACCAAACGCGCGGGCCGCACACATGCGCGCCCGCGAACCTGAAGCGCGCATAAAATTCCACGAAGCTTCGCGCTCCGCGCCGCGTCCGAGAAAAACGGAAAATCGTTGAAACACAGGCACAATGAAAACCGCCGAAGCCTGCGCTTCGCGCAAAATATCGAAAAAGTGCTATCATGTCCGTACTTATTTATAGTACA # Right flank : GTCGATTTCGTGCTGGAAAATCAGCCATTCGCGGTGTCGCGCCACGTCGAGGGCGCGGCGATTTCTATCTCCCTCCGCCGGTTTCCCGCCTCTCCTAGTAATTTCTGCGATTTTCGTCTATAATACGCGCGGCATTTAATTTTGCAACCGATTGCAAAGATCCTTGGGGGGAACGAACTATGGCGAGAAAGCAACTTGTTTACGGAATCAACGATAAGCCGCCGCTGCCGATACTCGTGCTTGCGGGGGCGCAGCATGTGCTGACGCTCTTCGGCGCGACTACGCTCGTGCCGCTCGTGCTCGGGCCGGCGATGGGGATGACTACGGCGCAGATGGGAGCGTTCATCGGCTGCGTCTACTTCGGCATGGGCATCGCTACGCTCATTCAGACGCATCCGAAGCTCGGCTCCGGGCTTCCGATAGTTCAGGGCTCGAGCTTCAGTTTCATACCGCCCATCATGACAATCATCGGCGCGTACAAGAGCATGGGGCCTGACGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCTCGCGAGCGCGTGAGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //