Array 1 34429-34661 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PZGQ01000001.1 Staphylococcus simulans strain SNUC 983 contig001, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     34429	    36	 100.0	    30	....................................	ACGATTAAACAATAAGTCCAAACCGTGCTT	
     34495	    36	 100.0	    29	....................................	AGAAAGAGAAAAAGCCATTAAAATGTTGG 	
     34560	    36	 100.0	    30	....................................	CTTTACGTGACGGGGATATTGACCGCCCTG	
     34626	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         4	    36	 100.0	    30	GTTTTAGTACTCTGTAGTTTTAGGTATAAGTGATTC	                              	       

# Left flank :   ATTATCAAGCGAAAGAAAAGGCGTTTTTGATTTATCTGTATCCAGAAGCGGGTTTAAGTATAAAAGAGCAAATTAGATTTAGAAAAACATTAAATGATCTGCCAATTCCAATAATAGTATTAACAGAGTCCTCATATTTTTTATCAGAGAATATCAAAGGTTTGAACTACTTTATCAACAATATCCAAATGATTACTGAAGAGTTTATTGATGATAGTTACTGGAATGCGCCAATTAATATAGAAATAGAAAAGTTTAAAGAGAGGTTTGAGTATTTGTTTAAAAAATATTGCTCAGTTTTAGAGGTTAATCCTGTAATATCCAACTATACTCTCGGTGATATAATTGTTTTCAATGATTTAGATCTTTATGTAGTTGTTGCATTTTTAAAGTATTGCAAATTAGAGTGTCAACTAGATATTGATCGAACAAAAATTTCTTCAGCATTATCGGCTTATCTATTTTCTTGACTATGATTAAATTATATAATTGTGCTAGAG
# Right flank :  CGTAATTCTTTAACTAGTTGTTCTAATACTCGTTTTAGTACTCTGTAATTTTTAAGCAGCTCCGGCTGCTTTATTTAGTTCATTTACGAACATTCAGCAAAGTTTGTTTAGTTACTGTAAATAGGGTTTTTAAAGAAGGAAAGTTTGGTTACGTTAAAGATGAGTAAACTAGATAAACTTAGGAGGCCTATAATGAGAAAAATCGGTATCTTTTTAACAACGTTAGTTGCGGTAGCATTAATTTTTACTGGAATTGAAGACATTGTGAAAGGTGCAGAAGCTCAAGCAGCTAAAGCAGTTACGGGTGAAGTAGTTTCTGATGAATTGGATCCAGACGGTGACAGATGGGCAAATATCGGATTTGAAAATATCAAATTAGATGAACCTTACCAAACTAAGTTAGTTCAATTAACACATCTGAAAGACACTGGTAAAATGTCTACGACTGAATACAATGAAAAAGTTGCTGCATTAATTTCAGAAGCAAGATCAATTGATGC

# Questionable array : NO	 Score: 5.86
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAGTTTTAGGTATAAGTGATTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:67.57%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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