Array 1 591125-593586 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPGY02000001.1 Clostridium pasteurianum DSM 525 = ATCC 6013 ctg1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 591125 30 100.0 35 .............................. AATTTTAAGTATCTAAATTACATTACCTTGCTCTA 591190 30 100.0 35 .............................. TGGACAGGGATTGCAATTACTGGTGGTCTTACTCC 591255 30 100.0 37 .............................. TTGAGTAACAGCATTGCTTTAAAGGTAAGTACCACAG 591322 30 100.0 37 .............................. CAGGTCGAAATTGCTAAAAAATTAAATGCCAGTCAGC 591389 30 100.0 36 .............................. GACTATATTGCATCTTCCTGTAGATGGTATAGTTGG 591455 30 100.0 35 .............................. CAGTCATCTTTATCTATGCTCTTATGCTCCTTACC 591520 30 100.0 36 .............................. ATATGTGAACTCAATATCTTGTAGAGAGCATCTAGT 591586 30 100.0 36 .............................. AGTGAATGGCAAGAAACAAGAATTAAAGGCAAACTG 591652 30 100.0 37 .............................. TGCGTTGATATACCGTCTAACAGCAGAGAAAAAGTAA 591719 30 100.0 35 .............................. AAAATCTTGGTTGATGAATTTAGTGTAACAGGTAA 591784 30 100.0 35 .............................. CCTCAAAACAAAAGCTAAGCTATTAACCTTTGTTT 591849 30 100.0 36 .............................. ATAATGTATTAAACACAAAAGACATTTTAAAGAATA 591915 30 100.0 35 .............................. GCTAGCAGGTAAAGCTACACCAGTAACAATAGATA 591980 30 100.0 36 .............................. ACTAAGTGGAATTATCAGGATGAAGAATCACTTCTT 592046 30 100.0 35 .............................. TTATTACATCCGTTTCGTTTCTTCTAGCCAGTTTG 592111 30 100.0 36 .............................. TGTGAAAAAATAAAAAAAGAACTTGACAGAAAAAGG 592177 30 100.0 36 .............................. TTGTAACTGTAAACAGTGAGGAAGTTGAAGTGATTT 592243 30 100.0 34 .............................. GTAAAATTTGATTGTCCTCATTGCGATGAAGAAA 592307 30 100.0 35 .............................. ATTATTACTGTGTATTGGACTGAGATAGAAAAAGT 592372 30 100.0 36 .............................. AAATAGGATAGGTGCAATACCAAAGCATACATTATA 592438 30 100.0 36 .............................. AAAAGTTGAAGAAGATGTTGCAGTTGCTAATAGTAC 592504 30 100.0 37 .............................. GCAAATTTGGTATGCTGATCTTGGCGATGAAAAATCA 592571 30 100.0 37 .............................. GACATTTCATATTTGATAAGACTTGTTTCTTGTTTTT 592638 30 100.0 36 .............................. TTGCAATAGAATGTGATAAAGACCATACTCATATGT 592704 30 100.0 34 .............................. GAGAAGCTAATTATACCAAAGAGATATGTATTGA 592768 30 100.0 35 .............................. TTTCATTTTCTACGGAAGAATTGAATTTATTTGTA 592833 30 100.0 36 .............................. AGTAATGACTAAAAAGGAATTAGTTTTGAATATAAA 592899 30 100.0 36 .............................. CTTGGAACTCCAACGGAACTTGGCAATCACCTAAAT 592965 30 100.0 37 .............................. CCAAACAAGATGGCGATAGAGTTTATTTATTTAGTGG 593032 30 100.0 35 .............................. ATAATATGGATTGAAGAGTGTTCAGAAGTTAAATA 593097 30 100.0 36 .............................. TCTTTACCAATTGCAAACATAGCACTGGCAGAGATG 593163 30 100.0 36 .............................. AATTAATGAACTTGTAAAGAGCTCATATTCTTCTAC 593229 30 100.0 36 .............................. AAAACAAAAATAGAAAGGTAGGTGAATTTATCTATG 593295 30 100.0 36 .............................. GGAAGGTGTTACAAAGGATGAAATTATAAAAGTATA 593361 30 100.0 34 .............................. ACAAATATCTGCGGCATTTGGTATAAAATTGCAT 593425 30 100.0 36 .............................. GCACAAAAAATGATTGTTAATGCAACTTTAGCATCA 593491 30 100.0 36 .............................. TACATATTGACTTATATCTGTATCTAAACTACCACC 593557 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 38 30 100.0 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : TTGGAGAGGCGGCAATAACAACGAAGAAGAAACTCTATCACAATGCTATTGGAATACACTTAAACTTGCTATTGAAAATAAAATTAAAACTATAGCTTTTCCAAATATAAGTACAGGGATATATGGATTTCCAAAGCTACCAGCGGCAAAGATTGCACTAAATACTGTTTCAAAATTTGTAGAAGAAAATAAAGACATAGAGAAGGTTATTTTTGTTTGTTTTGATGAAGAGAATTGGGGGATTTATAGGGGGATGCTTAACAGTGCTAGAAAATAGATATATCTATAATTTAATTTAGTAAATTGATAATATTCAATAAGATTTTACCAAGTAAGATAAAAATAAAGATACCTATGAAGTACTTATACATAAGGCTTATAGGTGTTTTTCTATTAAAATTTACGTAAGACTAAAAATAGCTGGTAAAATTTTTGCTAAATCCTTTATTTTTAATGAATAGAGCATTATAATTATAGTAAAGAATGGCTAGTTTTAAGTA # Right flank : TGTTAAAATAAAGGATAAATGATTAATAAATATGTTATAATATTAATTATCTAATATTTAAATTAAGGATGGGATTTTATTATGGATAGAACAGAGTTATTAAATGTTATTAAGAATGGAGAAAATTCATATATAGAATTCAAAGAAGAAGCTATAAAAGCAAAAGATTTGGCAGAAGAATTTGTAGCTTTTGCTAATGCCGAAGGTGGAACGGTGCTAATAGGAATAGCTGACGATGGAGGCATAAAAGGGGTAACTGATAGTAATATAGAAGAGAAGATTATGAATATTTGCAGGAATAATTGTATTCCTAATATAATTCCTCTTTATGAAGAAATAGAATTTAATCAATTGAAAGTTGTAGTAGTTGCTATTTCAAAGGGATTAAATAAACCTTATTATACTGTTGATAATAAATATTATATAAGAGTAGGTACTACAAAACGAATTGCTTCAAGAGAAGAATTAATGAGATTATTTGAAGCCAATGGAAGTATTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [78.3-90.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 2725311-2724751 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPGY02000001.1 Clostridium pasteurianum DSM 525 = ATCC 6013 ctg1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2725310 30 100.0 36 .............................. CAGATAATGCTACATGGAGAGGGGCTATAACACAAG 2725244 30 100.0 36 .............................. TAATCATTATTTTCTCCTAACCAAATTCCATATTTC 2725178 30 100.0 35 .............................. ATATCAGGACAGTCATCTAATCTGCTAGTGTTTAG 2725113 30 100.0 36 .............................. TGGAATAGTTAATACACAACTTACTTTTGAAGATTT 2725047 30 100.0 36 .............................. TAATAATACCTTCCTGCAAATTCATAATTTTTTTGA 2724981 30 100.0 36 .............................. TAATTTGGAAAACCTATATGAAAAGAGGATAGTGCA 2724915 30 100.0 34 .............................. ACAGCAGTTGCAAATAATGCAACTGCTACAGTAC 2724851 30 100.0 41 .............................. CTACTTGGTTAAATGAATTAAGGAGAGAATAATAAGATATG 2724780 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 99.6 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AGTTTTAGCATCATAATAATAGAAGTTAGAATAACTTCATAAGCATATTGCCTATAAGGAATAATAAAACTGGGTATAAGAGAATAGGTTTTACCACAGGATTGACATTTACAACGCAGGATGACTATCTTGTATGCACCTTTAAGGGTAATTAAGTTTCTATAATAAAATCCATGTCTGTACAGCTTACCTTCAAATCCACATGCTTCGCATCCATATTTACTTGGAAATTGATTAAACTTACAAAGTTTATTGTATTTTTTTATTCCGTAAGGCATTTTTACTATATTTATCATTATTATTTCTTCTCATAATTAAAAAATTTTCTCCTTACTAATTATCGTCAGATTAAATAATCTTATTCTTTTTGAGTCAGATTATTTAATCTGACCTATAAATTAAGTCTATAATAATTTGACTTTTTTGAATGTTTTTTAGCTTAAGTAAAATGCCTAATAACAAATTACAGGTAAGATTAGAAAAACTATGGATTTCTTAGT # Right flank : GCATAGTACCATAAGTACCACTGCCCTTCTCCACTGTTGAGTTATGCATGAAAAAGTCAGCTTACAGACAAAAATCTGTATATAAGCTGACTTTTTTAGGTGATGATTTTTTTATTATAATAAAAAGGATTTTTTCATTTTCCATAGAAATATATAAACCATTAACCTATAAATCGAAAAGAGGTGGATTTTAGTGAGAGAAATGCAATTATTATATTTTCTCACTGAAGATAAAAATGAATAAAAAACCTATTATTCTGCTATTGGCAGTAGCAGTTTCAATTGGATTGATATTGCCAGCAAAATATACTTATGCAGCCACTAGCCATAAAACTGTAATTTCTAAATCAAAGTCTAAGCCGTCACCAAATCTAAAGTCCATGACTTGTATAGATACGCCAAGATCAGGAAGCTTTTTAAATAAAAATACTTTAATAGGCGGATGGGCGCTGAATAAATCTGGAGTGAAAGAGGTTCAAATTTTAGTTGACGGCAAGTTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //