Array 1 46371-46765 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOGW01000054.1 Escherichia coli strain 472 BN4_472_1_(paired)_contig_54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46371 29 100.0 32 ............................. GCGGTTTTTTTATAACATTTGATTCACTTCAG 46432 29 100.0 32 ............................. GTCGGATAACTCTTCATCGGCGCGAATCATGC 46493 29 100.0 32 ............................. AGCGAGGGGCGATTCCGGCAGGGCGTGCACAT 46554 29 100.0 32 ............................. GGCGCGGCGAACTCCAGCACAACCAGCCTGCG 46615 29 100.0 32 ............................. GATAATGTTCATCATATAAGAGAACGTCAGGT 46676 29 100.0 32 ............................. CAATGGGGGCAACGGTTCCCCTGGTTTTGTCA 46737 29 93.1 0 ........................G...A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTTTTGGCGACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGATTGTGCATTGAAACCTGCATTGCTCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGATTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGCGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTCGGTATAGGATTACTTTAAATATTTAGCTTTTCAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATTATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTCGTATTAAGCAATATATCCACGTAACACCTCATGTTCAAAATAGCTCTCCATATATGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATTAAAGTGTTAGTTGTATGATACTTAAATCATTAAGAAATTATCATATATTATTTTTTTAATATTGAATTGATGTTTGTTAATTTTTTCTTTAGGATAATAGATTGTTTTTTAAGCTTATTATTCATTGATTAAGTAATAAATCTGGAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGTCTCTATAGGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAATGAAAATTGATAAAGTACGGTTTGCGTTGTCTTTTATTCTAAGGACATCGAGTGTAGTTAATATTCCTTGTAACAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 72313-74170 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOGW01000054.1 Escherichia coli strain 472 BN4_472_1_(paired)_contig_54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72313 29 100.0 32 ............................. CCGGATACTAATTCGTGGAGCCTGCTGGACCC 72374 29 100.0 32 ............................. CACCAGATCTGACATGGTGCGGTGATCGCGCA 72435 29 100.0 32 ............................. CCGGATACTAATTCGTGGAGCCTGCTGGACCC 72496 29 100.0 32 ............................. TGTTTCGGCTGATTTGTTCGCCGCGTCAGTGC 72557 29 100.0 32 ............................. ACAGTTCCCCGCATTAGCGTGGATAATCCGTT 72618 29 100.0 32 ............................. CCCCTGATTAAAACCAATAGTCTCGTAATATT 72679 29 100.0 32 ............................. GCCAGATGAGGGATTCGCAATGAGCAACATGA 72740 29 100.0 32 ............................. TAATATGCTCTATAAGTGCCTCTATCCGATCC 72801 29 100.0 32 ............................. TCAGATCCGTACACTCTGCAAAACTCGCAATA 72862 29 100.0 32 ............................. GGCTAATTTTATTTTTTGCGTAGCGAGCGAGG 72923 29 100.0 32 ............................. GACCATTCTGTGAGCCGTAAAACAGAAAAATC 72984 29 100.0 32 ............................. ATTCTGTTTTCGCTGCTGTAGACCAACTTTGG 73045 29 100.0 32 ............................. CCCAGGTTTATTTGCATGAAAATACATTGCGC 73106 29 100.0 32 ............................. ACCGGGTATACAGAGCAACCGCCAATACTCGC 73167 29 100.0 32 ............................. CAAGTCGGGCGAAATGCAGGACACTTTATCCG 73228 29 100.0 32 ............................. TATTCCCCGAATGCTGGTCTGGCTGCTGATAA 73289 29 100.0 32 ............................. GGCTGCATATGAGCACGAGACACCCAGTAATT 73350 29 100.0 32 ............................. GGCTGCGTATGAGCACTAGACACCCGGTAATT 73411 29 100.0 32 ............................. CAGCTCGTTCGCATGATATGTACCCGAGACGG 73472 29 100.0 32 ............................. GCTATTACATGTGTGATTTATTACATCTGTAA 73533 29 100.0 32 ............................. TGATGAAAACCATTACCAAAGAACGTCTACAG 73594 29 96.6 32 .....T....................... GTCGTAGGTGATGAAAGAAAAGAATGATTTAT 73655 29 100.0 32 ............................. TCCACAGGTCGGAGAGGCTTTTCGTCATGTTG 73716 29 100.0 32 ............................. TAAACTATTCAACTTCATCTCATCTAAAATCT 73777 29 100.0 32 ............................. GGTCAGTGGTCTGTTCATGATGTACTCCATGT 73838 29 100.0 32 ............................. CCGTGGGCTAAACGATTGACGCGGCCTGACGG 73899 29 96.6 32 ............................T TGCAAATCGGTGTTATCGTCGAGCGTCCGCTC 73960 29 100.0 32 ............................. ACAAAATAGAGGACTTTGGTGAATATGCGGTA 74021 29 96.6 31 ............C................ TCAGCATTTGCTGGGTACGGCGCGGATATTG 74081 29 96.6 32 ............C................ AGAGAAAACGGCCTACTCGTAGTTCCCACACG 74142 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.6 32 GAGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGAAATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTGTATGTAGGTGATGTATCCGCAAGAATCCGTGAAATGATCTGGGAACAAATATCTGGACTGGCGGAAGAAGGCAATGTGGTGATGGCATGGGCTACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACTCCGGTAGATTTGGATGGTTTAAGGTTGGTCTCTTTTTTACCTGTTTAAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCTCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //