Array 1 9089-11240 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBY01000113.1 Clostridium sp. DSM 8431, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 9089 31 100.0 34 ............................... ACTATAGTTTCTAATTGTCTGTATGATAGCTTGA 9154 31 100.0 34 ............................... AAAGGTATCATAATCCATATTTATATAAAAACGT 9219 31 100.0 36 ............................... CAAATTCTATAGAAAGTAAATTTATTACATAATTCT 9286 31 100.0 34 ............................... GCTTATAATGATTATGTTTGATTAAAATTCAACA 9351 31 100.0 36 ............................... TACTCTGCTTTTTCTTCATCAGTAGCTTGTCCTAAA 9418 31 100.0 35 ............................... CAACATTCCAACATTGGTATGCAGATTTTCATATA 9484 31 100.0 36 ............................... TACTCTGCTTTTTCTTCATCAGTAGCTTGTCCTAAA 9551 31 100.0 35 ............................... CAACATTCCAACATTGGTATGCAGATTTTCATATA 9617 31 100.0 36 ............................... TATTACTATCATTACAATAGTAATTAAAACTTAAAG 9684 31 100.0 36 ............................... AATATACCACCTTTCCAATACCAGTTAACACCGATA 9751 31 100.0 36 ............................... TTTATTTCTCCTAAGCTTAAAGTTCCTTTCTTTCCA 9818 31 100.0 36 ............................... GCTACATGGAATAAATTAAGTATGTATTTAAATGCA 9885 31 100.0 35 ............................... TTAAATCACCTCTATTATTTTGGTAAACATTACTA 9951 31 100.0 35 ............................... TAGAGCTAAGAGCAGCTAAACTTAAAAGTGTTCCA 10017 31 100.0 36 ............................... CTTGTGTAAAATGTTAAATGATTTAGAAATGCCACA 10084 31 100.0 37 ............................... TCCTTCTAAAAGTTTATTATTATCTCCTTTAACATAA 10152 31 100.0 34 ............................... TATAATCCTCTGGATTAAGCCCCTCTGGAAGTTC 10217 31 100.0 36 ............................... GGAAAGATATCTAAAAAGCTTAAATATATTAACTGG 10284 31 100.0 35 ............................... TTGTGTGGGAATATAAGAACCGGAAGTTATGAAGC 10350 31 100.0 37 ............................... AAATATATAGATAGAGCTACACAATTCCCTCCTTGCT 10418 31 100.0 34 ............................... TGGATACGTTAGAAAATGTTGATGTTATTTGCCC 10483 31 100.0 36 ............................... TTTAAAATATTGCTTACAGCTTGTACTCCAATTGCT 10550 31 100.0 35 ............................... GCATGTAATGGTATTAGAAGCATATGGGATGGATT 10616 31 100.0 34 ............................... TTCCTGCCATTTAATCCACCCCCTATTACACTTC 10681 31 100.0 33 ............................... ATTGTAAATTATCAGGAATTTTTATTCTAAGAC 10745 31 100.0 36 ............................... AGTAGAAACAGATCCTAAACCAACACCAGGATTTAA 10812 31 100.0 37 ............................... TAATAGACTTATAAGATATTCCACGATAAGCTTTATA 10880 31 100.0 36 ............................... TTAAAATTTATACTCATTTAAATTCCTTCTTTCTAT 10947 31 100.0 35 ............................... CTATTATGTCTTTTGTAGTTTATATCTAGCTTACA 11013 31 100.0 35 ............................... ATATATATTATATCTTTGTAAGAATTTATATTAAA 11079 31 100.0 33 ............................... AACTTGAAACATGATATTTCGATTATGAAATTA 11143 31 100.0 36 ............................... ACTTGTACATTATTTCCCTTTGGATATATATTAAAA 11210 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 33 31 100.0 35 GTTCAACATTAACATATAGATGTATTTAAAC # Left flank : CATAAGAGCCCTTTAAAAAATCCGGTACCAATAAAGTTTTTAAAAGTAATGCCAGATGTAGCTTGGCGTTTTGAATTTAATCTCAAGGATGGTATTTTAAGCATAAATCAAAAGAGAGAATTATTCAAAGCAATTATAAAAGACATAGGTATAGGAGCAAAAACTAATTTGGGATATGGAGCGTTGATAGATATAGAAGACATTGACACTAAAGATAGTTCTAATCTTGAAGATGAAAATTTAATTAGTAGTAACCCTAATGAACTTACTCCACAGATGTTATTAGCTCTTAAACAAAAATTTAACGGGTAGTTAAATTATTAGTTTTTCCAACCGTTTCTTTGATATGTACAAGTTTAAAACTACTTATATCAATAAATAGAGTTATATTTAATATTAGATTTTAGTTTTTATGATTCGGTTGGAAAAAATTTTGAGAAATTAGTGTATAACTTGGGTTAGGTGAGGTATAATAAAAGAGGAATGGCTTAAAAGCTTTG # Right flank : GTAGTATCCACAACGGCAACCTCCTTATACATAGTAGTTGTTTAACACATACTAAAAGTGGTTCTTTCCAATGTTAGTTGAAACAGCCTAGATTCTATTATATAATATGAATAATAAAATCAAGGGGAAAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAACATTAACATATAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 4906-6268 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBY01000124.1 Clostridium sp. DSM 8431, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 4906 31 100.0 36 ............................... TTGCAACAGTTGCTCTTAAAAGAGGAAATGAACATG 4973 31 100.0 34 ............................... TTTACATATGTCAAAATAGGAAGAAAATAATTTA 5038 31 100.0 35 ............................... ATTTGTAGGTGTGTCTAAAGCATCTACCATTTTTT 5104 31 100.0 36 ............................... GCATTTCCATACATTATAGCATTGTCATACATTACA 5171 31 100.0 34 ............................... GTAACAACTAATGATTCACGTAAATCAGTTATTT 5236 31 100.0 36 ............................... TAGTATACATATTTATCTTTAAGTAAAGCTAAACCA 5303 31 100.0 37 ............................... TGTACTTTAAAGTAATTATAATTCTTCTTTCTTACAG 5371 31 100.0 36 ............................... AATGAGTATTTATCATTTAAAAACAGTAGTCTTTCA 5438 31 100.0 36 ............................... CTACTCTTTTATTATAACATCTTTTTGTATATCTTG 5505 31 100.0 35 ............................... TAAGCTTCTTTAAGACTTTTACATTTTTGCTCCTG 5571 31 100.0 36 ............................... TAAGGCACTTGGTTTTAAAGCTCCTACTGGTGGTGG 5638 31 100.0 37 ............................... ATAGATCTAAGCTTACTCTTTTGCCATTGTTCCCAGT 5706 31 100.0 35 ............................... ATGTACTATTGGTATTATAAAATTTTAATTCCACA 5772 31 100.0 35 ............................... TAATTACCTGGAAAATTATTTTTGTTTGTATAAGA 5838 31 100.0 35 ............................... TTATTTAACATATATTGAGGGTGGGGGTTTCCTCT 5904 31 100.0 35 ............................... ATTTACATCAGTAATGCTTGTAGATGATACAGTTC 5970 31 100.0 35 ............................... TTGGATATGGCATTACGTTATTTACATACGTACCT 6036 31 100.0 36 ............................... ATACTTTCAATTAATTCTTCTTTTTTTCTCTCATAT 6103 31 100.0 35 ............................... TCTTCTTTTTATTAAGCATAAAACCACCTCTTTTT 6169 31 100.0 38 ............................... CCACATATAATCTGCCGTCTTGTATCCACCTAACCTTA 6238 31 83.9 0 .........C.....T.......G..C...A | ========== ====== ====== ====== =============================== ====================================== ================== 21 31 99.2 36 GTTAAACAGTAACATGTAGATGTATTTAAAC # Left flank : TGTATCTTCATTGGTGTAAGTTATGTGCTTTAGGAGGCACTGATGATGATATTAGAAAGGTTTATAATAAAATAACTACTGAAGAACCTGTTATAAATTTAAGTAGCATAAGTGTTATAAGTCCTGAAAATTGGAGAAACTTTAGAGGCTGGTGTACTGAAGATATAGATCCAGTAAGTGATGTATTTACTATTAGTAATGCTAACAGTAAATATAGCTATAAAGTAAATCATTATGTACCACCAGGAGATGTAATAACTAGCACTGTTTCTACAAAGTATGCTGAAGATTATGTTTTAGGAAGTGGATTTAAAAAATAATTACTTTTCCAATGGATTTTAGTTATGGTACAAGCTTTAAGACTGATAGTTTAAGGAGTTAAGTTATATTTGCCTGTTAGCTTTTAAGATTTAGAAATCCATTGGAAAAACTTTTGAGAAATGACTGTATATCTTATGGTAGAAGGTATATAATAAATAAGGAATGGCTTAAAAACGTTG # Right flank : AACCATATAAAATGCAAAACAATAATTTAAAATATTAATCTATTATAACAATCAAGTGGAAGATAAAAGAAAAACAAGTTATAATAGTTAAAAGGAGTTTGAAATTTAATAGCTTAATTATATTACATAAAAAAGGATGAGTTAAAAAATGAAAATAGGAATGAGAAAGCCGAGTTTAAAAAAGAGCTTTAAAGCCAGAACTACTGGCAAGATGAAGAGGAAAGGCAAAAAAGCCATCAATCCTTTATACGGTAAGAAGGGAATGGGATGGATTAATGACCCTAAGAAGGCTGCCTATAATAAGGTTTATCATAAAACTACATTTGGAGTTAATGATATTATGAGAACAGCTTCTTCTGGGACTTCAAGTTCTAAAAAATCAAAGAAGGTAGCTTATTCAAGTAGCAATAAAAAGAATATTAAAGAGGATCTAAAATTATTAGATAAAGAGTATAATGTTAATACTAAAATTCTAAGTAAATATCATTGGGATGCTATTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAGTAACATGTAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 9362-12271 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBY01000104.1 Clostridium sp. DSM 8431, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================== ================== 9362 30 100.0 38 .............................. TATTTCCACTATTAAAGTTATCTTCCGAATTATCATTT 9430 30 100.0 37 .............................. TCAATAAAACTTGTCCAAGCTGAAAAATTATATGTAG 9497 30 100.0 36 .............................. ATCCTTTCTGAGAATTATTATAAATCAATAATTGTA 9563 30 100.0 36 .............................. TTCCTTTCTCCTCTCCAATCTGTAAAACCAACTTTA 9629 30 100.0 37 .............................. TTAGTAATTTTAAAGAATACAATGATTTTGCAAGTCA 9696 30 100.0 36 .............................. CTAGTATTATTTTTTAATAATTTTTTACTGCTTATT 9762 30 100.0 36 .............................. TTTTAAATTAAAACATAAGAGATATGGTGATTAATG 9828 30 100.0 35 .............................. AAGTTATAATGTTTGCCTTTAAACTCTATTTGCGC 9893 30 100.0 36 .............................. CAGTATGAAACTTGTTTTTCTAGATATTTATTAGAA 9959 30 100.0 36 .............................. GCATTTAAAGCTACAGTAATGGTTAAAGATTTTAAC 10025 30 100.0 36 .............................. AGCATATTTAACTCTAACCCTACTTCCGCATTTTCC 10091 30 100.0 36 .............................. GTTATGGTATATACAACAAACAATAATATTAGATTT 10157 30 100.0 36 .............................. AAAGATTATGTTCCTAATGCAGCAGTTATGGATAGA 10223 30 100.0 35 .............................. ATTGATGCGTGCATCACACCTTCTAATGTATCTAT 10288 30 100.0 37 .............................. ATATCAAAATGCTTGAAAAAACGTAATTTAACTAATG 10355 30 100.0 34 .............................. TAAAAATATTCATTACAAACAAGTAGAAAAGTTG 10419 30 100.0 36 .............................. ATTCTTAAAGTATAAAAACTAGTATTCTATTTTATA 10485 30 100.0 36 .............................. CTATGTGATATAATATCTTTCCTAAACAGCAGATAT 10551 30 100.0 36 .............................. GCAGATAAAACTTTAAAGAAACTTCAAAAGAAAAAC 10617 30 100.0 36 .............................. GAACTTATTGACTGGTTTAAAAAACATGGATATAAA 10683 30 100.0 36 .............................. GCGAAGCAATGAAACGTGTGTATGGAGAAATAGAAT 10749 30 100.0 35 .............................. ATATAAAAATGAGAAGGAGAATTTGAAGATGATAG 10814 30 100.0 38 .............................. AATATTGAAAATCTATAATCTTCTATAAATTTTTTAGC 10882 30 100.0 37 .............................. TATACTACAGGTCAAGATTTTCAAGAAAAAATGGCAA 10949 30 100.0 36 .............................. AGAAGTAATATTGATAAACTTGATAGTGTAGAAAAA 11015 30 100.0 38 .............................. GATATACTAATAAAAATAAATAATAAAAAGCTTAAAAA 11083 30 100.0 37 .............................. TAGAATAATATTTTACGTGGTATTTCTTTAGTAGGAA 11150 30 100.0 35 .............................. ATAGTTAAATACTTAGTATTTTCACATAGCTTTAT 11215 30 100.0 36 .............................. TTGGATGCAATGTATTCACGTTTAAGAGATATAGTG 11281 30 100.0 35 .............................. TCATGTTCAATACCTTCAGAATTATTTTTAGATAT 11346 30 100.0 36 .............................. TTGTTTTATATTTCTTATCCCTTGCCTTTTAAATAA 11412 30 93.3 72 ............................NN NNNNNNNNTTTAAGTAGTACCATAATGGAATGTAAATACATTCATAGAACTATTCTTTTTCTTTTTAATGGT 11514 30 100.0 37 .............................. TCCGAATTTGCTCCGGTAATGGAAAGTGTAATGGAGT 11581 30 100.0 37 .............................. TGTATACTAGAAATTACACCTAATACAGTTGATTTAA 11648 30 100.0 37 .............................. TTCTATAATCTATACCAGGTATAAGCCTTCTACTTTT 11715 30 100.0 37 .............................. GTACTAATTAATGTTCCTAATGTTGCAGCTACAGATG 11782 30 100.0 35 .............................. TTTTAAAACATCTCCTCTTTTTTAATTGTAGTTTC 11847 30 100.0 36 .............................. TGTAGTAGATACATTATTAGTCACAACTGTATTATT 11913 30 100.0 35 .............................. ATTCAAAAGAATACGGTTGATATTTTTATGCGTCA 11978 30 100.0 37 .............................. TAATAAAAATCTCCTTTACTTTTTTAAAATTATGTTA 12045 30 100.0 36 .............................. TTAAAGTTTAAAAACAGGGATATAGTTCTATATATA 12111 30 100.0 36 .............................. ATAATATAAATATTGTAATGCCTTGCAATACATAAA 12177 30 100.0 35 .............................. CAAGTATTAAAAGCTAATATGCGAATCGTTGGAGC 12242 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================================================== ================== 44 30 99.8 37 ATTTAAGTAGTACCATAATGGAATGTAAAT # Left flank : GAAAGAGTATGAACCATTCAAAATATGGTGGTAGGTGAATTTATGTATATTATACTTGTTTATGATATAAAAACTGATGATTATGGAAAAAGAATATTAAATAGAACATTTAAAATTTGTAAAAAATATTTGAGTCATATACAGAATTCAGTGTTTGAAGGAGAATTATCAGAGGGTCAATTGATAAAACTTAAATATGAATTAAATAATGTTATAAGAAGTCATAGTGATTCGGTAATAATTTTTAAAAGCCGAAATGAGAGGTGGTTGCAAAAAGAATTTTGGGGTATAGAAGAGGATAAAAATAGCAATTTTATTTGATTGTCTACCTAAGATAATGCTAAAATATACTGGGATAGACAAAACAAATAATTATAACTATTTTGTTTGAATTATATAGAAAAATAGTATTATATTTTACTAAATAAATCATTACATTTTTTTAGATAGACAAAGAAATGTAATTTATATATTTAGACTTAATAGATTATAATAAACGG # Right flank : TTGTATAACTTATCGGATTAACCCCTTTATATTGGACAAAATCTATTAAATTCTAAGTTTTTCTCAATTTTATATCTTTATGCAAATTTTTTGTGGATTCTCTC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAGTAGTACCATAATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 7705-7186 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBY01000155.1 Clostridium sp. DSM 8431, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================================================================================================================================================== ================== 7704 30 100.0 34 .............................. TACTGCTGATTTAGAAGCAAGTAGATTACTAGAA 7640 30 100.0 36 .............................. TTCATTTCTTAAATCTTTTTCTTCTTTTCTTCCTTT 7574 30 100.0 37 .............................. TACTTTATATATCCTTTAAACATTGCAAACTGTAAAG 7507 30 100.0 34 .............................. GGATTAGTATCTTTTCCTTCATTTTTTTCAAATG 7443 30 83.3 196 ............T..A........A...TT TCCTTAAAATTTGATAAAAGAGAATTTTATTTGCTTAAACTTTATTAATTATGAAGTTTAAGTATTTTTTTGTATAAAAAGCAAAAATATATGAATAGAAAAATAATTTGAGTCAATACTATAGATACATTAACCCTAACATATTAATAAAAATGTTTTAAATTTATTATATATAAATCTTAATAAAGTAAAAGAA T [7425] 7216 30 80.0 0 A.T............A......TG.....A | A [7191] ========== ====== ====== ====== ============================== ==================================================================================================================================================================================================== ================== 6 30 93.9 68 GTCTAACATTAACATGAGATGTATTTAAAC # Left flank : CT # Right flank : AATCATTATTATATATAAATCTTAATTAAGTTATTTATTTTTATAAATTATTTCTATATACATTATTTGCTTATAAAAAATATATCTAATAAATATGAAAGGAGATAATTTAATGCGCGTATATGAAATAAAAATAAAACTTTTTTTAATGAAAGATATTAAATTAAGTGAAACTCAGACTTCTATAGCATCTTTTATTGATAAAGCTTTTGGAATAAACGAAGAATTAATTGAGTTTCATAAAAGAAATTGTTTTAAGAATTATTGTTTTGATCTATTATACCCTATAGAAAAAGATAAGCTTTATAAAAATAATAAAGCCTACACTTTAAGAATTAGGACTATTAATAGAAATTTAGCAGATTTCTTTAGTAATAAACTTGTAAATTGTTATGATAATAACTTCAAAGCACTAGTAGGCGAAATTAAGATTATCCCTAAAAAACCAATTGAAAAATTATACTCCATAACACCTGTTATATTAAAAAATGATTCTGGTT # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-3, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACATTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [93.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //