Array 1 334829-332637 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNGA01000005.1 Maridesulfovibrio ferrireducens strain DSM 16995, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 334828 28 96.4 33 T........................... ATATTAACCCCACAGTGTTAAATAAATTTTACC 334767 28 100.0 32 ............................ CACTGGAAACTGACTGCGCTGTAGTCCATTAT 334707 28 100.0 32 ............................ TGTAGCGTCCTCGGCTATCGTACCAACTGTTC 334647 28 100.0 33 ............................ AAAAAGAAATGGGCTTCAATCGTAGGCTTAAGA 334586 28 96.4 32 ..............G............. CTTGATAAGTACACCAGCAGGCAGCGCGGTAT 334526 28 100.0 32 ............................ GTGTATCGGCACAAGAGATTTATTTTCAAATT 334466 28 100.0 32 ............................ TCCCGGCTTCTGCTTTAATTTGGGGGACGAGG 334406 28 100.0 32 ............................ GACATAGAAATTAAAACAACCGAACTTCTAGC 334346 28 100.0 32 ............................ GCTGAAAAATCAGGCGTTGAAATCCTTTACAT 334286 28 100.0 32 ............................ ATTGTCCATGTATCAGCGGACTTACTGTGAAC 334226 28 100.0 32 ............................ GCTTTCAACTCTCACACTTTCTGGCCAACGCA 334166 28 92.9 32 ............GC.............. CCGATAGGACACCAGCTCAATTCGCGGGGAGT 334106 28 92.9 32 ............GC.............. CCGATAGGACACCAGCTCAATTCGCGGGGAGT 334046 28 96.4 32 ............G............... CGAATGATCTAAAGCATTTTTCAAACCTTTTT 333986 28 100.0 33 ............................ TACTATCATGTCAATAATAAGCTGGTCATACAA 333925 28 100.0 32 ............................ CCAATCTTGAGTGCAGGACAGAGTGTTCCACT 333865 28 100.0 32 ............................ TTTCGGTTGGTAATTTCGGCATATTTGGTGAA 333805 28 100.0 32 ............................ ATCAAGTTAGAATGGGTGCTTCGTGGGTTGAC 333745 28 100.0 32 ............................ TTGCTTGCATTAGCAACAACCGGGATAGCAGT 333685 28 100.0 32 ............................ TTGGCAATGTTCAATAGGTGTTCAGGCTTTAC 333625 28 100.0 32 ............................ GTGAAATGGCAAATAGGGCAGGACGTAGTAGT 333565 28 100.0 32 ............................ CCATCAGTTGCACCGGGGATAACAGAACCACC 333505 28 100.0 32 ............................ ACGTAGCATCGACAGACTTCGGGAATGTATAT 333445 28 100.0 32 ............................ ATGAAAGCTCTTAAACTTGGACATATGCCTCC 333385 28 100.0 32 ............................ ACCCAATCTAACTCCACACAATTCACTTTGAT 333325 28 100.0 32 ............................ AAAAATAGTTTTTCATTTAGCAAATGGTTTAT 333265 28 100.0 32 ............................ ATGCGCCTCAGTGATATTTGAAATATAAAACC 333205 28 100.0 32 ............................ TAAACTGAGTTTGTTAAGCCCTGATACGGGAG 333145 28 100.0 32 ............................ CGGTCCCGCTTCTCTTCGTTCGCTCCTGCGAG 333085 28 100.0 32 ............................ AATGTCTGACCTACTAACTCGTAAGCCGACTT 333025 28 100.0 32 ............................ TATGAAAATAGACGCAATAAACCTTCTTGAAA 332965 28 100.0 32 ............................ AAGCGAAATACGCCTGCTTACTTGGGATGATA 332905 28 100.0 32 ............................ AGTTTGGAAGTGAAATAATTAACTTCCAAAAG 332845 28 100.0 33 ............................ GTTTGCGTCGTGCCGGCTATCGTGTCGAATGGA 332784 28 100.0 32 ............................ AGAGATACGGGTACGTACGAGCTCGATATCTG 332724 28 100.0 32 ............................ AAGGAGCAAGCAATGAGCCTTGATTTTGCAAA 332664 28 96.4 0 ...T........................ | ========== ====== ====== ====== ============================ ================================= ================== 37 28 99.2 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : GTTGATGAACAAAGTTTATACAAAATTACATAAAGCTTTATTTTCCCTAAAATCGGATGGTATTGGAGTTAGTTTTCCTTCTTATCGCCTAAAATTAGGCAGAGAACTGAGGATTCATGGTGCCATTGCTTCCTTAAACGATTTGCAAAAACTCGACTGGATTGGCGGATTGGTTGGGTACTGCGATATCAGTGCCGTGTCCATTATTCCTGAAAACTGTCAATATAGAGTAATCTCACGAAAACAAGCTAATATGACACGATCAAAATTAAATCGCCTAATAAGGCGTGAGTCTATTAGTGGTGATCAAATTAAAGAATATAAAGCCAAAATGTTTAGCAAGGGAATAGCTAACCCATATTTTGAGCTGGAGAGCGAATCGAATGGACATAAGCATCGCCGCTATATTCAATTTGGTGAGACCTCAAGTGTTCCCGTTCATGGCAAATTTGATTTTTTCGGTTTAAGCAAAACGGCAACAGTCCCTTGGTTTTAATCTT # Right flank : TAGAAGTGAAATAACTACACCACCGGACAATCCGTCCCAACAGGAGTAACTCCGGACAAATCAACCTTGCTGCGAACCTTGCCAAGGTCATAGTTGGCCTGCATAGCCAGCCAGCTTTCAGGGGTACGTCCGAGAACCTTTGAAAGACGCAGGGACATTTCAGGTGATACCGCACTCTTGCCATTCAGAACACGTGTGAGGGTGGAGGGAGCAACCCCGAGCATCTTTGCAAGCTTGCGGCAGCTGAGAGTGTACTCTGCCATATACACGGAGCTGATAAGCTCACCGGGGTGTGGGGGATTGTACATAGTCATTAGTGGTAATCCTCGTAGTTTAAAATGTAAGCATTCCCATCGCGGTATTCAAAGGTCAGCCGCCAATTACCATTGACGGTTATGGACCATAGATCCGCACGGCTTCCTTTGAGCTTGTGCAGCCGGAATCCGGGAAGGTTTACGTCCTCTACTTCCTGAGCCGTATCAATGACCGAAAGCTGGATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //